Gene annotation
Transcriptome id Sobic.009G235900.1
Synonym Sb09g028840
Functional annotation transporter family protein, putative, expressed
UniProt C5YVX6
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF123
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology K08145; SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G75220 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g49270.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a044612 , Zm00025a044609 , Zm00025a044607 , Zm00025a044049 , Zm00025a036642 , Zm00025a036639 , Zm00025a036637
Brachypodium KQK04811 , KQK04808
Barley HORVU1Hr1G089680.4 , HORVU1Hr1G089680.2 , HORVU1Hr1G089680.3 , HORVU1Hr1G089680.1 , HORVU4Hr1G083850.1 , HORVU1Hr1G089530.11 , HORVU1Hr1G089530.4 , HORVU1Hr1G089530.6 , HORVU1Hr1G089530.7 , HORVU1Hr1G089530.10 , HORVU1Hr1G091460.2
Wheat TraesCS4B02G339600 , TraesCS5A02G509600 , TraesCS1B02G448300 , TraesCS4B02G340000 , TraesCS4B02G340000 , TraesCS1D02G426000 , TraesCS4B02G339700 , TraesCS4B02G339700 , TraesCS1D02G413700 , TraesCS1A02G405600 , TraesCS4B02G339800 , TraesCS4D02G336300 , TraesCS4D02G336100 , TraesCS4D02G336100 , TraesCS1A02G405800 , TraesCS1D02G413900 , TraesCS4D02G335900 , TraesCS1A02G418300 , TraesCS5A02G509400 , TraesCS4D02G336200 , TraesCS1B02G435900
Populus -


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cDNA sequences
Sobic.009G235900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
2 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
3 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
4 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.005G007800 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
6 Sobic.010G042900 expressed protein -
7 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
8 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
9 Sobic.001G347600 paramyosin, putative, expressed -
10 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
11 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
13 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
14 Sobic.007G130600 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed K01969: 3-methylcrotonyl-CoA carboxylase beta subunit
15 Sobic.009G117400 protein kinase domain containing protein, expressed -
16 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
17 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
18 Sobic.001G111366 - -
19 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
20 Sobic.004G034400 plant-specific domain TIGR01589 family protein, putative, expressed -


Gene co-expression network
sample Sobic009G235900 Sobic009G235900 Sobic001G194900 Sobic001G194900 Sobic009G235900--Sobic001G194900 Sobic002G188500 Sobic002G188500 Sobic009G235900--Sobic002G188500 Sobic008G160700 Sobic008G160700 Sobic009G235900--Sobic008G160700 Sobic001G359400 Sobic001G359400 Sobic009G235900--Sobic001G359400 Sobic005G007800 Sobic005G007800 Sobic009G235900--Sobic005G007800 Sobic010G042900 Sobic010G042900 Sobic009G235900--Sobic010G042900 Sobic003G005800 Sobic003G005800 Sobic009G235900--Sobic003G005800 Sobic003G145900 Sobic003G145900 Sobic009G235900--Sobic003G145900 Sobic001G347600 Sobic001G347600 Sobic009G235900--Sobic001G347600 Sobic001G194900--Sobic008G160700 Sobic010G001600 Sobic010G001600 Sobic001G194900--Sobic010G001600 Sobic007G130600 Sobic007G130600 Sobic001G194900--Sobic007G130600 Sobic005G187200 Sobic005G187200 Sobic001G194900--Sobic005G187200 Sobic001G543800 Sobic001G543800 Sobic001G194900--Sobic001G543800 Sobic001G194900--Sobic009G235900 Sobic001G424700 Sobic001G424700 Sobic001G194900--Sobic001G424700 Sobic005G177800 Sobic005G177800 Sobic001G194900--Sobic005G177800 Sobic005G130200 Sobic005G130200 Sobic001G194900--Sobic005G130200 Sobic002G188500--Sobic009G235900 Sobic002G188500--Sobic003G005800 Sobic004G037900 Sobic004G037900 Sobic002G188500--Sobic004G037900 Sobic001G498200 Sobic001G498200 Sobic002G188500--Sobic001G498200 Sobic002G188500--Sobic001G194900 Sobic006G138400 Sobic006G138400 Sobic002G188500--Sobic006G138400 Sobic002G188500--Sobic003G145900 Sobic002G188500--Sobic008G160700 Sobic001G490000 Sobic001G490000 Sobic002G188500--Sobic001G490000 Sobic008G160700--Sobic010G001600 Sobic008G160700--Sobic001G194900 Sobic010G078100 Sobic010G078100 Sobic008G160700--Sobic010G078100 Sobic008G160700--Sobic007G130600 Sobic008G160700--Sobic009G235900 Sobic006G214500 Sobic006G214500 Sobic008G160700--Sobic006G214500 Sobic006G124900 Sobic006G124900 Sobic008G160700--Sobic006G124900 Sobic002G303000 Sobic002G303000 Sobic008G160700--Sobic002G303000 Sobic009G027000 Sobic009G027000 Sobic008G160700--Sobic009G027000 Sobic001G359400--Sobic009G235900 Sobic001G359400--Sobic010G078100 Sobic001G359400--Sobic005G007800 Sobic001G359400--Sobic010G042900 Sobic001G359400--Sobic002G303000 Sobic002G009600 Sobic002G009600 Sobic001G359400--Sobic002G009600 Sobic001G359400--Sobic001G347600 Sobic001G373100 Sobic001G373100 Sobic001G359400--Sobic001G373100 Sobic001G359400--Sobic008G160700 Sobic005G007800--Sobic009G235900 Sobic005G007800--Sobic010G042900 Sobic005G007800--Sobic002G303000 Sobic005G007800--Sobic003G145900 Sobic005G007800--Sobic001G359400 Sobic009G040700 Sobic009G040700 Sobic005G007800--Sobic009G040700 Sobic004G143700 Sobic004G143700 Sobic005G007800--Sobic004G143700 Sobic005G007800--Sobic010G078100 Sobic005G007800--Sobic001G424700 Sobic003G093600 Sobic003G093600 Sobic010G042900--Sobic003G093600 Sobic007G023700 Sobic007G023700 Sobic010G042900--Sobic007G023700 Sobic010G042900--Sobic001G347600 Sobic010G042900--Sobic005G007800 Sobic004G034400 Sobic004G034400 Sobic010G042900--Sobic004G034400 Sobic001G028700 Sobic001G028700 Sobic010G042900--Sobic001G028700 Sobic010G042900--Sobic009G235900 Sobic009G117400 Sobic009G117400 Sobic010G042900--Sobic009G117400 Sobic006G129700 Sobic006G129700 Sobic010G042900--Sobic006G129700 Sobic003G005800--Sobic002G188500 Sobic001G443900 Sobic001G443900 Sobic003G005800--Sobic001G443900 Sobic003G005800--Sobic009G235900 Sobic003G005800--Sobic008G160700 Sobic003G005800--Sobic004G037900 Sobic003G005800--Sobic006G138400 Sobic003G005800--Sobic001G194900 Sobic009G121100 Sobic009G121100 Sobic003G005800--Sobic009G121100 Sobic003G005800--Sobic006G214500 Sobic003G145900--Sobic009G235900 Sobic003G145900--Sobic008G160700 Sobic003G145900--Sobic005G007800 Sobic004G330900 Sobic004G330900 Sobic003G145900--Sobic004G330900 Sobic001G221100 Sobic001G221100 Sobic003G145900--Sobic001G221100 Sobic003G145900--Sobic010G042900 Sobic003G145900--Sobic002G303000 Sobic006G114500 Sobic006G114500 Sobic003G145900--Sobic006G114500 Sobic003G145900--Sobic004G037900 Sobic010G263800 Sobic010G263800 Sobic001G347600--Sobic010G263800 Sobic001G347600--Sobic007G023700 Sobic001G347600--Sobic004G143700 Sobic002G077200 Sobic002G077200 Sobic001G347600--Sobic002G077200 Sobic001G347600--Sobic009G117400 Sobic007G035600 Sobic007G035600 Sobic001G347600--Sobic007G035600 Sobic007G073400 Sobic007G073400 Sobic001G347600--Sobic007G073400 Sobic007G205800 Sobic007G205800 Sobic001G347600--Sobic007G205800 SobicK016900 SobicK016900 Sobic001G347600--SobicK016900
Octagon: transcription factors


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