Gene annotation
Transcriptome id Sobic.001G359400.2,Sobic.001G359400.1
Synonym CYP709B2, Sb01g034330
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt A0A1B6QN03 , A0A1B6QN13
Pfam PF00067
Panther DB PTHR24282 PTHR24282:SF50
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G46950 : cytochrome P450, family 709, subfamily B, polypeptide 2
RAP-DB (Rice) LOC_Os03g25480.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a002631
Brachypodium -
Barley -
Wheat TraesCS2B02G147600 , TraesCS2A02G125100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
2 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
3 Sobic.005G007800 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
4 Sobic.010G042900 expressed protein -
5 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
6 Sobic.002G009600 AMP-binding domain containing protein, expressed -
7 Sobic.001G347600 paramyosin, putative, expressed -
8 Sobic.001G373100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
9 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
10 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
11 Sobic.001G168400 similar to Serine/threonine-protein kinase SAPK10(PubMedID : 29862293)@CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.002G300400 serine/threonine-protein kinase CTR1, putative, expressed -
13 Sobic.007G130600 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed K01969: 3-methylcrotonyl-CoA carboxylase beta subunit
14 Sobic.010G199300 OsPOP14 - Putative Prolyl Oligopeptidase homologue, expressed -
15 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
16 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
17 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
18 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
20 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase


Gene co-expression network
sample Sobic001G359400 Sobic001G359400 Sobic009G235900 Sobic009G235900 Sobic001G359400--Sobic009G235900 Sobic010G078100 Sobic010G078100 Sobic001G359400--Sobic010G078100 Sobic005G007800 Sobic005G007800 Sobic001G359400--Sobic005G007800 Sobic010G042900 Sobic010G042900 Sobic001G359400--Sobic010G042900 Sobic002G303000 Sobic002G303000 Sobic001G359400--Sobic002G303000 Sobic002G009600 Sobic002G009600 Sobic001G359400--Sobic002G009600 Sobic001G347600 Sobic001G347600 Sobic001G359400--Sobic001G347600 Sobic001G373100 Sobic001G373100 Sobic001G359400--Sobic001G373100 Sobic008G160700 Sobic008G160700 Sobic001G359400--Sobic008G160700 Sobic001G194900 Sobic001G194900 Sobic009G235900--Sobic001G194900 Sobic002G188500 Sobic002G188500 Sobic009G235900--Sobic002G188500 Sobic009G235900--Sobic008G160700 Sobic009G235900--Sobic001G359400 Sobic009G235900--Sobic005G007800 Sobic009G235900--Sobic010G042900 Sobic003G005800 Sobic003G005800 Sobic009G235900--Sobic003G005800 Sobic003G145900 Sobic003G145900 Sobic009G235900--Sobic003G145900 Sobic009G235900--Sobic001G347600 Sobic010G078100--Sobic008G160700 Sobic010G078100--Sobic002G303000 Sobic009G121100 Sobic009G121100 Sobic010G078100--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic010G078100--Sobic006G214500 Sobic009G027000 Sobic009G027000 Sobic010G078100--Sobic009G027000 Sobic010G078100--Sobic001G359400 Sobic010G078100--Sobic001G373100 Sobic006G122400 Sobic006G122400 Sobic010G078100--Sobic006G122400 Sobic004G295800 Sobic004G295800 Sobic010G078100--Sobic004G295800 Sobic005G007800--Sobic009G235900 Sobic005G007800--Sobic010G042900 Sobic005G007800--Sobic002G303000 Sobic005G007800--Sobic003G145900 Sobic005G007800--Sobic001G359400 Sobic009G040700 Sobic009G040700 Sobic005G007800--Sobic009G040700 Sobic004G143700 Sobic004G143700 Sobic005G007800--Sobic004G143700 Sobic005G007800--Sobic010G078100 Sobic001G424700 Sobic001G424700 Sobic005G007800--Sobic001G424700 Sobic003G093600 Sobic003G093600 Sobic010G042900--Sobic003G093600 Sobic007G023700 Sobic007G023700 Sobic010G042900--Sobic007G023700 Sobic010G042900--Sobic001G347600 Sobic010G042900--Sobic005G007800 Sobic004G034400 Sobic004G034400 Sobic010G042900--Sobic004G034400 Sobic001G028700 Sobic001G028700 Sobic010G042900--Sobic001G028700 Sobic010G042900--Sobic009G235900 Sobic009G117400 Sobic009G117400 Sobic010G042900--Sobic009G117400 Sobic006G129700 Sobic006G129700 Sobic010G042900--Sobic006G129700 Sobic002G303000--Sobic010G078100 Sobic002G303000--Sobic009G121100 Sobic002G303000--Sobic008G160700 Sobic003G407300 Sobic003G407300 Sobic002G303000--Sobic003G407300 Sobic002G303000--Sobic009G040700 Sobic002G303000--Sobic005G007800 Sobic004G196700 Sobic004G196700 Sobic002G303000--Sobic004G196700 Sobic002G303000--Sobic009G235900 Sobic008G024600 Sobic008G024600 Sobic002G303000--Sobic008G024600 Sobic002G009600--Sobic001G359400 Sobic009G183200 Sobic009G183200 Sobic002G009600--Sobic009G183200 Sobic010G264100 Sobic010G264100 Sobic002G009600--Sobic010G264100 Sobic001G120300 Sobic001G120300 Sobic002G009600--Sobic001G120300 Sobic002G009600--Sobic005G007800 Sobic002G009600--Sobic009G235900 Sobic001G168400 Sobic001G168400 Sobic002G009600--Sobic001G168400 Sobic001G394600 Sobic001G394600 Sobic002G009600--Sobic001G394600 Sobic002G009600--Sobic002G303000 Sobic010G263800 Sobic010G263800 Sobic001G347600--Sobic010G263800 Sobic001G347600--Sobic007G023700 Sobic001G347600--Sobic004G143700 Sobic002G077200 Sobic002G077200 Sobic001G347600--Sobic002G077200 Sobic001G347600--Sobic009G117400 Sobic007G035600 Sobic007G035600 Sobic001G347600--Sobic007G035600 Sobic007G073400 Sobic007G073400 Sobic001G347600--Sobic007G073400 Sobic007G205800 Sobic007G205800 Sobic001G347600--Sobic007G205800 SobicK016900 SobicK016900 Sobic001G347600--SobicK016900 Sobic001G373100--Sobic008G160700 Sobic009G119200 Sobic009G119200 Sobic001G373100--Sobic009G119200 Sobic001G373100--Sobic010G078100 Sobic001G156100 Sobic001G156100 Sobic001G373100--Sobic001G156100 Sobic006G149700 Sobic006G149700 Sobic001G373100--Sobic006G149700 Sobic001G373100--Sobic009G027000 Sobic001G373100--Sobic003G145900 Sobic001G373100--Sobic001G359400 Sobic002G113300 Sobic002G113300 Sobic001G373100--Sobic002G113300 Sobic010G001600 Sobic010G001600 Sobic008G160700--Sobic010G001600 Sobic008G160700--Sobic001G194900 Sobic008G160700--Sobic010G078100 Sobic007G130600 Sobic007G130600 Sobic008G160700--Sobic007G130600 Sobic008G160700--Sobic009G235900 Sobic008G160700--Sobic006G214500 Sobic006G124900 Sobic006G124900 Sobic008G160700--Sobic006G124900 Sobic008G160700--Sobic002G303000 Sobic008G160700--Sobic009G027000
Octagon: transcription factors


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