Gene annotation
Transcriptome id Sobic.001G168400.1
Synonym Sb01g014720, SRK2E, ATOST1, SNRK2.6, P44, OST1, SNRK2-6
Functional annotation similar to Serine/threonine-protein kinase SAPK10 (PubMedID : 29862293)
CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5WT44
Pfam PF00069
Panther DB PTHR24343 PTHR24343:SF169
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K14498; serine/threonine-protein kinase SRK2
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G33950 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g41460.1 : CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a020619 , Zm00025a017309 , Zm00025a039555 , Zm00025a031584 , Zm00025a007414 , Zm00025a011244 , Zm00025a016728 , Zm00025a054146 , Zm00025a052118
Brachypodium KQK14205 , KQK13038 , KQK13039 , KQJ86090
Barley HORVU4Hr1G013540.13 , HORVU4Hr1G013540.12 , HORVU4Hr1G013540.11 , HORVU4Hr1G013540.10 , HORVU4Hr1G013540.17 , HORVU4Hr1G013540.16 , HORVU4Hr1G013540.15 , HORVU4Hr1G013540.14 , HORVU4Hr1G013540.19 , HORVU4Hr1G013540.18 , HORVU3Hr1G082690.5 , HORVU4Hr1G013540.20 , HORVU7Hr1G118150.20 , HORVU7Hr1G118150.22 , HORVU7Hr1G118150.23 , HORVU7Hr1G118150.24 , HORVU7Hr1G118150.26 , HORVU7Hr1G118150.27 , HORVU7Hr1G118150.1 , HORVU7Hr1G118150.3 , HORVU7Hr1G118150.5 , HORVU7Hr1G118150.4 , HORVU7Hr1G118150.7 , HORVU7Hr1G118150.6 , HORVU7Hr1G118150.9 , HORVU7Hr1G118150.8 , HORVU5Hr1G018340.5 , HORVU5Hr1G018340.4 , HORVU5Hr1G018340.7 , HORVU5Hr1G018340.6 , HORVU5Hr1G018340.1 , HORVU5Hr1G018340.2 , HORVU2Hr1G125950.4 , HORVU2Hr1G125950.1 , HORVU2Hr1G125950.2 , HORVU2Hr1G125950.3 , HORVU4Hr1G013540.3 , HORVU4Hr1G013540.2 , HORVU4Hr1G013540.1 , HORVU4Hr1G013540.7 , HORVU4Hr1G013540.6 , HORVU4Hr1G013540.5 , HORVU4Hr1G013540.4 , HORVU4Hr1G013540.9 , HORVU4Hr1G013540.8 , HORVU5Hr1G097630.21 , HORVU5Hr1G097630.20 , HORVU5Hr1G097630.9 , HORVU5Hr1G097630.1 , HORVU5Hr1G097630.6 , HORVU5Hr1G097630.7 , HORVU3Hr1G082690.6 , HORVU3Hr1G082690.7 , HORVU3Hr1G082690.4 , HORVU3Hr1G082690.2 , HORVU3Hr1G082690.3 , HORVU3Hr1G082690.1 , HORVU3Hr1G082690.8 , HORVU3Hr1G082690.9 , HORVU5Hr1G097630.15 , HORVU5Hr1G097630.19 , HORVU7Hr1G118150.13 , HORVU7Hr1G118150.30 , HORVU0Hr1G011570.4 , HORVU0Hr1G011570.5 , HORVU0Hr1G011570.1 , HORVU0Hr1G011570.2 , HORVU0Hr1G011570.3 , HORVU7Hr1G118150.2 , HORVU7Hr1G118150.21 , HORVU7Hr1G118150.28 , HORVU7Hr1G118150.29 , HORVU7Hr1G118150.14 , HORVU7Hr1G118150.17 , HORVU7Hr1G118150.16 , HORVU7Hr1G118150.11 , HORVU7Hr1G118150.10 , HORVU7Hr1G118150.12 , HORVU7Hr1G118150.19 , HORVU7Hr1G118150.18 , HORVU3Hr1G082690.10 , HORVU3Hr1G082690.11 , HORVU3Hr1G082690.12 , HORVU3Hr1G082690.13
Wheat TraesCS5B02G075800 , TraesCS5D02G081700 , TraesCS5A02G401700 , TraesCS4B02G079300 , TraesCS3A02G381100 , TraesCS3D02G374300 , TraesCS2D02G577000 , TraesCS7D02G525100 , TraesCS3B02G413800 , TraesCS4D02G078100 , TraesCS4D02G078100 , TraesCS4A02G235600 , TraesCS4A02G235600 , TraesCS5B02G406400 , TraesCS5A02G069500 , TraesCS2B02G630000 , TraesCS5D02G411900 , TraesCS5D02G411900
Populus -


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cDNA sequences
Sobic.001G168400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G264100 expressed protein -
2 Sobic.008G041700 TLD family protein, putative, expressed -
3 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
4 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
5 Sobic.002G300400 serine/threonine-protein kinase CTR1, putative, expressed -
6 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
7 Sobic.001G094000 expressed protein -
8 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
9 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
10 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.006G028200 glycine-rich protein, putative, expressed -
12 Sobic.002G161000 RNA recognition motif containing protein, expressed -
13 Sobic.006G048700 "fatty acid desaturase, up-regulated under severe drought stress"(PubMedID : 24655390)@Acyl-acyl-carrier-protein desaturase (Os)(PubMedID : 27208977)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
14 Sobic.006G060100 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
15 Sobic.004G196700 expressed protein -
16 Sobic.005G023900 expressed protein -
17 Sobic.001G413500 expressed protein -
18 Sobic.002G090800 expressed protein -
19 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
20 Sobic.009G170400 ribonuclease P family protein("PubMedID : 26759170,PubMedID : 24597475")@ribonuclease P family protein, putative, expressed K03538: POP4, ribonuclease P protein subunit POP4


Gene co-expression network
sample Sobic001G168400 Sobic001G168400 Sobic010G264100 Sobic010G264100 Sobic001G168400--Sobic010G264100 Sobic008G041700 Sobic008G041700 Sobic001G168400--Sobic008G041700 Sobic007G011400 Sobic007G011400 Sobic001G168400--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G168400--Sobic009G040700 Sobic002G300400 Sobic002G300400 Sobic001G168400--Sobic002G300400 Sobic003G187400 Sobic003G187400 Sobic001G168400--Sobic003G187400 Sobic001G094000 Sobic001G094000 Sobic001G168400--Sobic001G094000 Sobic001G486300 Sobic001G486300 Sobic001G168400--Sobic001G486300 Sobic005G149500 Sobic005G149500 Sobic001G168400--Sobic005G149500 Sobic010G264100--Sobic008G041700 Sobic010G264100--Sobic002G300400 Sobic003G268300 Sobic003G268300 Sobic010G264100--Sobic003G268300 Sobic001G413500 Sobic001G413500 Sobic010G264100--Sobic001G413500 Sobic010G264100--Sobic001G094000 Sobic010G264100--Sobic001G168400 Sobic009G134500 Sobic009G134500 Sobic010G264100--Sobic009G134500 Sobic010G264100--Sobic005G149500 Sobic001G477800 Sobic001G477800 Sobic010G264100--Sobic001G477800 Sobic008G041700--Sobic009G134500 Sobic008G041700--Sobic010G264100 Sobic008G041700--Sobic007G011400 Sobic005G187200 Sobic005G187200 Sobic008G041700--Sobic005G187200 Sobic008G041700--Sobic005G149500 Sobic002G283300 Sobic002G283300 Sobic008G041700--Sobic002G283300 Sobic007G137900 Sobic007G137900 Sobic008G041700--Sobic007G137900 Sobic010G263800 Sobic010G263800 Sobic008G041700--Sobic010G263800 Sobic010G026400 Sobic010G026400 Sobic008G041700--Sobic010G026400 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic002G157300 Sobic002G157300 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic009G040700--Sobic001G094000 Sobic009G040700--Sobic003G187400 Sobic009G040700--Sobic005G149500 Sobic009G040700--Sobic007G011400 Sobic009G040700--Sobic002G157300 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic004G196700 Sobic004G196700 Sobic009G040700--Sobic004G196700 Sobic008G078100 Sobic008G078100 Sobic009G040700--Sobic008G078100 Sobic010G001600 Sobic010G001600 Sobic002G300400--Sobic010G001600 Sobic006G124900 Sobic006G124900 Sobic002G300400--Sobic006G124900 Sobic001G543800 Sobic001G543800 Sobic002G300400--Sobic001G543800 Sobic002G300400--Sobic010G264100 Sobic008G160700 Sobic008G160700 Sobic002G300400--Sobic008G160700 Sobic002G165300 Sobic002G165300 Sobic002G300400--Sobic002G165300 Sobic005G177800 Sobic005G177800 Sobic002G300400--Sobic005G177800 Sobic007G130600 Sobic007G130600 Sobic002G300400--Sobic007G130600 Sobic001G194900 Sobic001G194900 Sobic002G300400--Sobic001G194900 Sobic003G187400--Sobic002G157300 Sobic003G187400--Sobic005G149500 Sobic003G187400--Sobic009G040700 Sobic003G187400--Sobic001G094000 Sobic006G173100 Sobic006G173100 Sobic003G187400--Sobic006G173100 Sobic006G060100 Sobic006G060100 Sobic003G187400--Sobic006G060100 Sobic003G401000 Sobic003G401000 Sobic003G187400--Sobic003G401000 Sobic003G187400--Sobic004G196700 Sobic007G104800 Sobic007G104800 Sobic003G187400--Sobic007G104800 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic005G023900 Sobic005G023900 Sobic001G486300--Sobic005G023900 Sobic001G420200 Sobic001G420200 Sobic001G486300--Sobic001G420200 Sobic001G486300--Sobic003G268300 Sobic001G486300--Sobic007G011400 Sobic001G497300 Sobic001G497300 Sobic001G486300--Sobic001G497300 Sobic004G290800 Sobic004G290800 Sobic001G486300--Sobic004G290800 Sobic001G107500 Sobic001G107500 Sobic001G486300--Sobic001G107500 Sobic001G251700 Sobic001G251700 Sobic001G486300--Sobic001G251700 Sobic003G220200 Sobic003G220200 Sobic001G486300--Sobic003G220200 Sobic005G149500--Sobic003G187400 Sobic005G149500--Sobic002G157300 Sobic005G149500--Sobic009G040700 Sobic005G149500--Sobic004G196700 Sobic005G149500--Sobic007G011400 Sobic005G149500--Sobic006G060100 Sobic007G185900 Sobic007G185900 Sobic005G149500--Sobic007G185900 Sobic005G149500--Sobic007G137900 Sobic007G078000 Sobic007G078000 Sobic005G149500--Sobic007G078000
Octagon: transcription factors


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