Gene annotation
Transcriptome id Sobic.003G176600.1
Synonym VAD1
Functional annotation expressed protein
UniProt A0A1B6Q406
Pfam PF16016
Panther DB PTHR23319
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02120 : GRAM domain family protein
RAP-DB (Rice) LOC_Os07g30940.1 : expressed protein
MaizeGDB (Corn) Zm00025a048092 , Zm00025a014697
Brachypodium KQK16178
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
2 Sobic.001G111900 - -
3 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
4 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
5 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
6 Sobic.008G062000 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
7 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
8 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
9 Sobic.002G310200 expressed protein -
10 Sobic.001G497300 protein kinase domain containing protein, expressed -
11 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
12 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
13 Sobic.009G161600 - -
14 Sobic.009G117400 protein kinase domain containing protein, expressed -
15 Sobic.001G186401 - -
16 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
17 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
18 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
19 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
20 Sobic.005G159000 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic003G176600 Sobic003G176600 Sobic006G273200 Sobic006G273200 Sobic003G176600--Sobic006G273200 Sobic001G111900 Sobic001G111900 Sobic003G176600--Sobic001G111900 Sobic001G298600 Sobic001G298600 Sobic003G176600--Sobic001G298600 Sobic001G253700 Sobic001G253700 Sobic003G176600--Sobic001G253700 Sobic007G132400 Sobic007G132400 Sobic003G176600--Sobic007G132400 Sobic008G062000 Sobic008G062000 Sobic003G176600--Sobic008G062000 Sobic008G067600 Sobic008G067600 Sobic003G176600--Sobic008G067600 Sobic001G281600 Sobic001G281600 Sobic003G176600--Sobic001G281600 Sobic002G310200 Sobic002G310200 Sobic003G176600--Sobic002G310200 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic009G233300 Sobic009G233300 Sobic006G273200--Sobic009G233300 Sobic006G273200--Sobic008G062000 Sobic006G237400 Sobic006G237400 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic006G273200--Sobic003G176600 Sobic010G056000 Sobic010G056000 Sobic001G111900--Sobic010G056000 Sobic009G161600 Sobic009G161600 Sobic001G111900--Sobic009G161600 Sobic009G127900 Sobic009G127900 Sobic001G111900--Sobic009G127900 Sobic001G454401 Sobic001G454401 Sobic001G111900--Sobic001G454401 Sobic007G178700 Sobic007G178700 Sobic001G111900--Sobic007G178700 Sobic005G077466 Sobic005G077466 Sobic001G111900--Sobic005G077466 Sobic006G262200 Sobic006G262200 Sobic001G111900--Sobic006G262200 Sobic003G084900 Sobic003G084900 Sobic001G111900--Sobic003G084900 Sobic006G009400 Sobic006G009400 Sobic001G111900--Sobic006G009400 Sobic001G298600--Sobic007G132400 Sobic006G228500 Sobic006G228500 Sobic001G298600--Sobic006G228500 Sobic004G121100 Sobic004G121100 Sobic001G298600--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic001G298600--Sobic001G107500 Sobic001G298600--Sobic002G310200 Sobic001G298600--Sobic006G273200 Sobic009G215800 Sobic009G215800 Sobic001G298600--Sobic009G215800 Sobic001G298600--Sobic003G176600 Sobic001G298600--Sobic001G281600 Sobic001G253700--Sobic006G237400 Sobic001G000200 Sobic001G000200 Sobic001G253700--Sobic001G000200 Sobic001G253700--Sobic006G273200 Sobic001G253700--Sobic003G176600 Sobic003G001000 Sobic003G001000 Sobic001G253700--Sobic003G001000 Sobic004G119100 Sobic004G119100 Sobic001G253700--Sobic004G119100 Sobic009G249200 Sobic009G249200 Sobic001G253700--Sobic009G249200 Sobic002G187801 Sobic002G187801 Sobic001G253700--Sobic002G187801 Sobic007G190333 Sobic007G190333 Sobic001G253700--Sobic007G190333 Sobic004G084300 Sobic004G084300 Sobic007G132400--Sobic004G084300 Sobic003G241200 Sobic003G241200 Sobic007G132400--Sobic003G241200 Sobic007G132400--Sobic008G067600 Sobic007G104800 Sobic007G104800 Sobic007G132400--Sobic007G104800 Sobic003G220200 Sobic003G220200 Sobic007G132400--Sobic003G220200 Sobic007G132400--Sobic001G107500 Sobic003G081000 Sobic003G081000 Sobic007G132400--Sobic003G081000 Sobic002G320500 Sobic002G320500 Sobic007G132400--Sobic002G320500 Sobic007G132400--Sobic002G310200 Sobic008G062000--Sobic006G273200 Sobic008G062000--Sobic004G205600 Sobic001G131800 Sobic001G131800 Sobic008G062000--Sobic001G131800 Sobic003G250500 Sobic003G250500 Sobic008G062000--Sobic003G250500 Sobic010G033400 Sobic010G033400 Sobic008G062000--Sobic010G033400 Sobic008G062000--Sobic008G067600 Sobic008G174300 Sobic008G174300 Sobic008G062000--Sobic008G174300 Sobic008G062000--Sobic007G205800 Sobic008G062000--Sobic007G132400 Sobic001G090400 Sobic001G090400 Sobic008G067600--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic008G067600--Sobic003G445400 Sobic008G067600--Sobic004G084300 Sobic002G157300 Sobic002G157300 Sobic008G067600--Sobic002G157300 Sobic001G315100 Sobic001G315100 Sobic008G067600--Sobic001G315100 Sobic001G512700 Sobic001G512700 Sobic008G067600--Sobic001G512700 Sobic009G000500 Sobic009G000500 Sobic008G067600--Sobic009G000500 Sobic004G057400 Sobic004G057400 Sobic008G067600--Sobic004G057400 Sobic008G047800 Sobic008G047800 Sobic008G067600--Sobic008G047800 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic001G281600--Sobic004G121100 Sobic001G281600--Sobic009G215800 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic001G222500 Sobic001G222500 Sobic002G310200--Sobic001G222500 Sobic002G310200--Sobic008G047800 Sobic007G217000 Sobic007G217000 Sobic002G310200--Sobic007G217000 Sobic002G310200--Sobic004G084300 Sobic002G310200--Sobic007G096000 Sobic010G101800 Sobic010G101800 Sobic002G310200--Sobic010G101800 Sobic003G443100 Sobic003G443100 Sobic002G310200--Sobic003G443100 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700
Octagon: transcription factors


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