Gene annotation
Transcriptome id Sobic.006G149700.1
Synonym Sb06g022820
Functional annotation DUF584 domain containing protein, putative, expressed
UniProt A0A1B6PM40
Pfam PF04520
Panther DB PTHR33083 PTHR33083:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28400 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os04g43990.1 : DUF584 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a056524 , Zm00025a010645
Brachypodium KQJ83641 , PNT65423 , PNT65422
Barley HORVU0Hr1G016350.1 , HORVU0Hr1G005210.2 , HORVU0Hr1G005210.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G373100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
2 Sobic.009G119200 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
3 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
4 Sobic.001G490000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLA4 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
5 Sobic.003G093300 - -
6 Sobic.004G037900 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
7 Sobic.002G113300 expressed protein -
8 Sobic.009G216100 polygalacturonase, putative, expressed -
9 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
10 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
11 Sobic.004G153400 OsFBK7 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
13 Sobic.004G153501 - -
14 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
15 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
17 Sobic.006G138400 regulatory subunit, putative, expressed -
18 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
19 Sobic.002G046800 transketolase, putative, expressed K00167: BCKDHB, 2-oxoisovalerate dehydrogenase E1 component beta subunit
20 Sobic.009G121100 expressed protein -


Gene co-expression network
sample Sobic006G149700 Sobic006G149700 Sobic001G373100 Sobic001G373100 Sobic006G149700--Sobic001G373100 Sobic009G119200 Sobic009G119200 Sobic006G149700--Sobic009G119200 Sobic001G156100 Sobic001G156100 Sobic006G149700--Sobic001G156100 Sobic001G490000 Sobic001G490000 Sobic006G149700--Sobic001G490000 Sobic003G093300 Sobic003G093300 Sobic006G149700--Sobic003G093300 Sobic004G037900 Sobic004G037900 Sobic006G149700--Sobic004G037900 Sobic002G113300 Sobic002G113300 Sobic006G149700--Sobic002G113300 Sobic009G216100 Sobic009G216100 Sobic006G149700--Sobic009G216100 Sobic010G001600 Sobic010G001600 Sobic006G149700--Sobic010G001600 Sobic008G160700 Sobic008G160700 Sobic001G373100--Sobic008G160700 Sobic001G373100--Sobic009G119200 Sobic010G078100 Sobic010G078100 Sobic001G373100--Sobic010G078100 Sobic001G373100--Sobic001G156100 Sobic001G373100--Sobic006G149700 Sobic009G027000 Sobic009G027000 Sobic001G373100--Sobic009G027000 Sobic003G145900 Sobic003G145900 Sobic001G373100--Sobic003G145900 Sobic001G359400 Sobic001G359400 Sobic001G373100--Sobic001G359400 Sobic001G373100--Sobic002G113300 Sobic009G119200--Sobic001G373100 Sobic009G119200--Sobic004G037900 Sobic009G119200--Sobic008G160700 Sobic009G119200--Sobic006G149700 Sobic009G119200--Sobic010G001600 Sobic009G119200--Sobic001G490000 Sobic004G153501 Sobic004G153501 Sobic009G119200--Sobic004G153501 Sobic001G151500 Sobic001G151500 Sobic009G119200--Sobic001G151500 Sobic004G153400 Sobic004G153400 Sobic009G119200--Sobic004G153400 Sobic009G121100 Sobic009G121100 Sobic001G156100--Sobic009G121100 Sobic001G447500 Sobic001G447500 Sobic001G156100--Sobic001G447500 Sobic006G214500 Sobic006G214500 Sobic001G156100--Sobic006G214500 Sobic002G152200 Sobic002G152200 Sobic001G156100--Sobic002G152200 Sobic009G229800 Sobic009G229800 Sobic001G156100--Sobic009G229800 Sobic001G156100--Sobic008G160700 Sobic001G156100--Sobic009G027000 Sobic001G373200 Sobic001G373200 Sobic001G156100--Sobic001G373200 Sobic004G295800 Sobic004G295800 Sobic001G156100--Sobic004G295800 Sobic001G490000--Sobic004G037900 Sobic001G490000--Sobic010G001600 Sobic003G005800 Sobic003G005800 Sobic001G490000--Sobic003G005800 Sobic001G490000--Sobic008G160700 Sobic001G490000--Sobic001G373100 Sobic001G490000--Sobic001G151500 Sobic001G490000--Sobic003G145900 Sobic006G114000 Sobic006G114000 Sobic001G490000--Sobic006G114000 Sobic009G235900 Sobic009G235900 Sobic001G490000--Sobic009G235900 Sobic007G026500 Sobic007G026500 Sobic003G093300--Sobic007G026500 Sobic003G093300--Sobic009G121100 Sobic003G093300--Sobic004G295800 Sobic008G191100 Sobic008G191100 Sobic003G093300--Sobic008G191100 Sobic003G093300--Sobic004G153400 Sobic006G138400 Sobic006G138400 Sobic003G093300--Sobic006G138400 Sobic003G093300--Sobic006G214500 Sobic003G093300--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic003G093300--Sobic003G407300 Sobic004G037900--Sobic001G151500 Sobic002G188500 Sobic002G188500 Sobic004G037900--Sobic002G188500 Sobic004G037900--Sobic008G160700 Sobic004G037900--Sobic001G490000 Sobic004G037900--Sobic010G001600 Sobic004G037900--Sobic003G005800 Sobic004G037900--Sobic009G119200 Sobic004G037900--Sobic003G145900 Sobic004G037900--Sobic009G235900 Sobic006G127100 Sobic006G127100 Sobic002G113300--Sobic006G127100 Sobic007G219900 Sobic007G219900 Sobic002G113300--Sobic007G219900 Sobic002G113300--Sobic001G156100 Sobic003G009100 Sobic003G009100 Sobic002G113300--Sobic003G009100 Sobic002G113300--Sobic001G373100 Sobic004G345800 Sobic004G345800 Sobic002G113300--Sobic004G345800 Sobic008G021800 Sobic008G021800 Sobic002G113300--Sobic008G021800 Sobic002G113300--Sobic001G447500 Sobic003G241000 Sobic003G241000 Sobic002G113300--Sobic003G241000 Sobic009G216100--Sobic009G027000 Sobic004G297400 Sobic004G297400 Sobic009G216100--Sobic004G297400 Sobic009G216100--Sobic006G149700 Sobic009G216100--Sobic001G373100 Sobic009G216100--Sobic002G113300 Sobic001G023200 Sobic001G023200 Sobic009G216100--Sobic001G023200 Sobic001G028700 Sobic001G028700 Sobic009G216100--Sobic001G028700 Sobic003G081100 Sobic003G081100 Sobic009G216100--Sobic003G081100 Sobic009G216100--Sobic009G119200 Sobic010G001600--Sobic008G160700 Sobic006G124900 Sobic006G124900 Sobic010G001600--Sobic006G124900 Sobic001G194900 Sobic001G194900 Sobic010G001600--Sobic001G194900 Sobic005G177800 Sobic005G177800 Sobic010G001600--Sobic005G177800 Sobic001G543800 Sobic001G543800 Sobic010G001600--Sobic001G543800 Sobic005G130200 Sobic005G130200 Sobic010G001600--Sobic005G130200 Sobic002G300400 Sobic002G300400 Sobic010G001600--Sobic002G300400 Sobic010G276800 Sobic010G276800 Sobic010G001600--Sobic010G276800 Sobic008G024600 Sobic008G024600 Sobic010G001600--Sobic008G024600
Octagon: transcription factors


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