Gene annotation
Transcriptome id Sobic.003G093300.2,Sobic.003G093300.1
Synonym
Functional annotation -
UniProt A0A1B6Q276 , A0A1B6Q284
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.009G121100 expressed protein -
3 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
4 Sobic.008G191100 nodulin, putative, expressed -
5 Sobic.004G153400 OsFBK7 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.006G138400 regulatory subunit, putative, expressed -
7 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
8 Sobic.001G373200 lipase precursor, putative, expressed -
9 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
10 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
11 Sobic.001G111500 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome A, putative, expressed K12120: phytochrome A
12 Sobic.004G153501 - -
13 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
14 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
15 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G172400 VHS and GAT domain containing protein, expressed -
17 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
18 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
19 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
20 Sobic.001G137100 homeodomain protein, putative, expressed -


Gene co-expression network
sample Sobic003G093300 Sobic003G093300 Sobic007G026500 Sobic007G026500 Sobic003G093300--Sobic007G026500 Sobic009G121100 Sobic009G121100 Sobic003G093300--Sobic009G121100 Sobic004G295800 Sobic004G295800 Sobic003G093300--Sobic004G295800 Sobic008G191100 Sobic008G191100 Sobic003G093300--Sobic008G191100 Sobic004G153400 Sobic004G153400 Sobic003G093300--Sobic004G153400 Sobic006G138400 Sobic006G138400 Sobic003G093300--Sobic006G138400 Sobic006G214500 Sobic006G214500 Sobic003G093300--Sobic006G214500 Sobic001G373200 Sobic001G373200 Sobic003G093300--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic003G093300--Sobic003G407300 Sobic007G026500--Sobic003G093300 Sobic007G026500--Sobic004G295800 Sobic007G026500--Sobic009G121100 Sobic004G021100 Sobic004G021100 Sobic007G026500--Sobic004G021100 Sobic007G026500--Sobic003G407300 Sobic004G052900 Sobic004G052900 Sobic007G026500--Sobic004G052900 Sobic002G340100 Sobic002G340100 Sobic007G026500--Sobic002G340100 Sobic001G154100 Sobic001G154100 Sobic007G026500--Sobic001G154100 Sobic001G253700 Sobic001G253700 Sobic007G026500--Sobic001G253700 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic001G156100 Sobic001G156100 Sobic009G121100--Sobic001G156100 Sobic001G443900 Sobic001G443900 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic010G078100 Sobic010G078100 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic002G303000 Sobic002G303000 Sobic009G121100--Sobic002G303000 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic008G191100--Sobic004G295800 Sobic008G191100--Sobic001G290000 Sobic008G191100--Sobic002G132000 Sobic008G191100--Sobic006G214500 Sobic008G191100--Sobic001G373200 Sobic008G191100--Sobic003G093300 Sobic003G433100 Sobic003G433100 Sobic008G191100--Sobic003G433100 Sobic008G191100--Sobic007G024700 Sobic009G126900 Sobic009G126900 Sobic008G191100--Sobic009G126900 Sobic004G153501 Sobic004G153501 Sobic004G153400--Sobic004G153501 Sobic002G046800 Sobic002G046800 Sobic004G153400--Sobic002G046800 Sobic004G153400--Sobic003G093300 Sobic001G111500 Sobic001G111500 Sobic004G153400--Sobic001G111500 Sobic001G123000 Sobic001G123000 Sobic004G153400--Sobic001G123000 Sobic002G226000 Sobic002G226000 Sobic004G153400--Sobic002G226000 Sobic001G111366 Sobic001G111366 Sobic004G153400--Sobic001G111366 Sobic007G148200 Sobic007G148200 Sobic004G153400--Sobic007G148200 Sobic009G235900 Sobic009G235900 Sobic004G153400--Sobic009G235900 Sobic006G138400--Sobic006G214500 Sobic003G408500 Sobic003G408500 Sobic006G138400--Sobic003G408500 Sobic006G138400--Sobic009G121100 Sobic006G138400--Sobic002G046800 Sobic006G138400--Sobic003G407300 Sobic010G001500 Sobic010G001500 Sobic006G138400--Sobic010G001500 Sobic008G009900 Sobic008G009900 Sobic006G138400--Sobic008G009900 Sobic006G138400--Sobic007G024700 Sobic003G005800 Sobic003G005800 Sobic006G138400--Sobic003G005800 Sobic006G214500--Sobic009G121100 Sobic006G214500--Sobic001G443900 Sobic006G214500--Sobic003G408500 Sobic008G160700 Sobic008G160700 Sobic006G214500--Sobic008G160700 Sobic006G214500--Sobic010G078100 Sobic006G214500--Sobic001G156100 Sobic006G214500--Sobic003G407300 Sobic001G447500 Sobic001G447500 Sobic006G214500--Sobic001G447500 Sobic009G249200 Sobic009G249200 Sobic006G214500--Sobic009G249200 Sobic001G373200--Sobic003G407300 Sobic001G373200--Sobic009G121100 Sobic001G373200--Sobic003G019100 Sobic001G373200--Sobic004G295800 Sobic001G373200--Sobic007G024700 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G373200--Sobic001G156100 Sobic001G373200--Sobic009G249200 Sobic003G407300--Sobic009G121100 Sobic003G407300--Sobic001G373200 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic003G407300--Sobic004G295800 Sobic009G229800 Sobic009G229800 Sobic003G407300--Sobic009G229800 Sobic003G407300--Sobic002G303000 Sobic003G407300--Sobic007G024700
Octagon: transcription factors


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