Gene annotation
Transcriptome id Sobic.001G031200.2,Sobic.001G031200.1
Synonym Sb01g002920
Functional annotation Methyltransferase small domain containing protein, expressed
UniProt C5WUY3 , C5WUY4
Pfam PF13659
Panther DB PTHR18895 PTHR18895:SF71
NCBI CDD KOG3191; Predicted N6-DNA-methyltransferase
KEGG Orthology K02493; hemK, prmC, release factor glutamine methyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13440 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os03g60920.1 : Methyltransferase small domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016408
Brachypodium -
Barley -
Wheat TraesCS5B02G500200
Populus -


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cDNA sequences
Sobic.001G031200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
2 Sobic.009G028800 OsFBX115 - F-box domain containing protein, expressed -
3 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
4 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
5 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
6 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
7 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
8 Sobic.004G006300 translationally-controlled tumor protein, putative, expressed -
9 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
10 Sobic.010G067700 expressed protein -
11 Sobic.004G034400 plant-specific domain TIGR01589 family protein, putative, expressed -
12 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
13 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
14 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
15 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
16 Sobic.001G291100 tetraspanin family protein, putative, expressed -
17 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
18 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
19 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta


Gene co-expression network
sample Sobic001G031200 Sobic001G031200 Sobic009G054700 Sobic009G054700 Sobic001G031200--Sobic009G054700 Sobic009G028800 Sobic009G028800 Sobic001G031200--Sobic009G028800 Sobic003G000800 Sobic003G000800 Sobic001G031200--Sobic003G000800 Sobic001G149700 Sobic001G149700 Sobic001G031200--Sobic001G149700 Sobic001G371300 Sobic001G371300 Sobic001G031200--Sobic001G371300 Sobic010G168600 Sobic010G168600 Sobic001G031200--Sobic010G168600 Sobic010G083700 Sobic010G083700 Sobic001G031200--Sobic010G083700 Sobic004G006300 Sobic004G006300 Sobic001G031200--Sobic004G006300 Sobic003G250500 Sobic003G250500 Sobic001G031200--Sobic003G250500 Sobic009G054700--Sobic001G031200 Sobic002G132300 Sobic002G132300 Sobic009G054700--Sobic002G132300 Sobic009G054700--Sobic010G168600 Sobic002G256300 Sobic002G256300 Sobic009G054700--Sobic002G256300 Sobic002G202400 Sobic002G202400 Sobic009G054700--Sobic002G202400 Sobic004G034400 Sobic004G034400 Sobic009G054700--Sobic004G034400 Sobic010G067700 Sobic010G067700 Sobic009G054700--Sobic010G067700 Sobic008G128600 Sobic008G128600 Sobic009G054700--Sobic008G128600 Sobic004G104900 Sobic004G104900 Sobic009G054700--Sobic004G104900 Sobic009G028800--Sobic001G031200 Sobic001G073000 Sobic001G073000 Sobic009G028800--Sobic001G073000 Sobic009G028800--Sobic003G000800 Sobic001G078500 Sobic001G078500 Sobic009G028800--Sobic001G078500 Sobic009G028800--Sobic009G054700 Sobic009G133400 Sobic009G133400 Sobic009G028800--Sobic009G133400 Sobic003G344900 Sobic003G344900 Sobic009G028800--Sobic003G344900 Sobic006G242300 Sobic006G242300 Sobic009G028800--Sobic006G242300 Sobic007G203700 Sobic007G203700 Sobic009G028800--Sobic007G203700 Sobic009G246950 Sobic009G246950 Sobic003G000800--Sobic009G246950 Sobic003G000800--Sobic001G031200 Sobic003G000800--Sobic001G078500 Sobic004G253000 Sobic004G253000 Sobic003G000800--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic003G000800--Sobic001G512600 Sobic003G000800--Sobic001G371300 Sobic003G000800--Sobic010G083700 Sobic003G000800--Sobic001G149700 Sobic007G186300 Sobic007G186300 Sobic003G000800--Sobic007G186300 Sobic010G071200 Sobic010G071200 Sobic001G149700--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G149700--Sobic010G055500 Sobic004G231400 Sobic004G231400 Sobic001G149700--Sobic004G231400 Sobic001G478300 Sobic001G478300 Sobic001G149700--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic001G149700--Sobic006G257900 Sobic008G142700 Sobic008G142700 Sobic001G149700--Sobic008G142700 Sobic003G273100 Sobic003G273100 Sobic001G149700--Sobic003G273100 Sobic001G076000 Sobic001G076000 Sobic001G149700--Sobic001G076000 Sobic001G512900 Sobic001G512900 Sobic001G149700--Sobic001G512900 Sobic001G371300--Sobic003G273100 Sobic002G291300 Sobic002G291300 Sobic001G371300--Sobic002G291300 Sobic001G371300--Sobic001G478300 Sobic004G274700 Sobic004G274700 Sobic001G371300--Sobic004G274700 Sobic001G427800 Sobic001G427800 Sobic001G371300--Sobic001G427800 Sobic004G079100 Sobic004G079100 Sobic001G371300--Sobic004G079100 Sobic001G371300--Sobic010G083700 Sobic001G056700 Sobic001G056700 Sobic001G371300--Sobic001G056700 Sobic001G371300--Sobic001G149700 Sobic010G168600--Sobic010G083700 Sobic010G168600--Sobic001G078500 Sobic010G168600--Sobic009G246950 Sobic002G352700 Sobic002G352700 Sobic010G168600--Sobic002G352700 Sobic006G263900 Sobic006G263900 Sobic010G168600--Sobic006G263900 Sobic003G007500 Sobic003G007500 Sobic010G168600--Sobic003G007500 Sobic009G171700 Sobic009G171700 Sobic010G168600--Sobic009G171700 Sobic010G168600--Sobic002G256300 Sobic010G168600--Sobic004G104900 Sobic010G083700--Sobic006G263900 Sobic010G083700--Sobic010G168600 Sobic001G054200 Sobic001G054200 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic010G083700--Sobic010G253800 Sobic010G083700--Sobic002G256300 Sobic010G083700--Sobic003G007500 Sobic009G178600 Sobic009G178600 Sobic004G006300--Sobic009G178600 Sobic009G117300 Sobic009G117300 Sobic004G006300--Sobic009G117300 Sobic006G254700 Sobic006G254700 Sobic004G006300--Sobic006G254700 Sobic006G209500 Sobic006G209500 Sobic004G006300--Sobic006G209500 Sobic004G348100 Sobic004G348100 Sobic004G006300--Sobic004G348100 Sobic001G428400 Sobic001G428400 Sobic004G006300--Sobic001G428400 Sobic009G117400 Sobic009G117400 Sobic004G006300--Sobic009G117400 Sobic001G111366 Sobic001G111366 Sobic004G006300--Sobic001G111366 Sobic001G028700 Sobic001G028700 Sobic004G006300--Sobic001G028700 Sobic004G059000 Sobic004G059000 Sobic003G250500--Sobic004G059000 Sobic004G305600 Sobic004G305600 Sobic003G250500--Sobic004G305600 Sobic004G301900 Sobic004G301900 Sobic003G250500--Sobic004G301900 Sobic008G062000 Sobic008G062000 Sobic003G250500--Sobic008G062000 Sobic001G281600 Sobic001G281600 Sobic003G250500--Sobic001G281600 Sobic003G226500 Sobic003G226500 Sobic003G250500--Sobic003G226500 Sobic003G250500--Sobic004G253000 Sobic003G250500--Sobic001G512600 Sobic001G119300 Sobic001G119300 Sobic003G250500--Sobic001G119300
Octagon: transcription factors


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