Gene annotation
Transcriptome id Sobic.004G297400.6,Sobic.004G297400.4,Sobic.004G297400.2,Sobic.004G297400.5,Sobic.004G297400.1,Sobic.004G297400.7,Sobic.004G297400.3
Synonym Sb04g033130
Functional annotation enoyl-CoA hydratase/isomerase family protein, putative, expressed
UniProt A0A1Z5RPP6 , A0A1Z5RPP2 , C5XS04
Pfam PF16113 PF00378
Panther DB PTHR11941 PTHR11941:SF79
NCBI CDD KOG1679; Enoyl-CoA hydratase
KEGG Orthology K05607; methylglutaconyl-CoA hydratase
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G16800 : ATP-dependent caseinolytic (Clp) protease/crotonase family protein
RAP-DB (Rice) LOC_Os02g43720.1 : enoyl-CoA hydratase/isomerase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a020901
Brachypodium KQK00581
Barley HORVU6Hr1G062320.3 , HORVU6Hr1G062320.2 , HORVU6Hr1G062320.5 , HORVU6Hr1G062260.4 , HORVU6Hr1G062260.6 , HORVU6Hr1G062320.1 , HORVU6Hr1G062320.4 , HORVU6Hr1G062320.9 , HORVU6Hr1G062320.8 , HORVU6Hr1G062260.2 , HORVU6Hr1G062320.10 , HORVU6Hr1G062260.12 , HORVU6Hr1G062260.11 , HORVU6Hr1G062260.9 , HORVU6Hr1G062260.5 , HORVU6Hr1G062260.3
Wheat TraesCS6D02G224900 , TraesCS6D02G224900 , TraesCS6D02G224900 , TraesCS6B02G281600 , TraesCS6B02G281600 , TraesCS6B02G281600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
2 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G122400 uncharacterized glycosyltransferase, putative, expressed -
4 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
5 Sobic.010G042900 expressed protein -
6 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
7 Sobic.001G111366 - -
8 Sobic.007G002200 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
9 Sobic.001G111500 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome A, putative, expressed K12120: phytochrome A
10 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
11 Sobic.004G034400 plant-specific domain TIGR01589 family protein, putative, expressed -
12 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
13 Sobic.003G241000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CTP synthase, putative, expressed K01937: pyrG, CTP synthase
14 Sobic.009G216100 polygalacturonase, putative, expressed -
15 Sobic.001G221100 ubiquitin family protein, putative, expressed K08770: ubiquitin C
16 Sobic.001G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed K03522: fixB, electron transfer flavoprotein alpha subunit
17 Sobic.001G373100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
18 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
19 Sobic.003G009100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
20 Sobic.002G113300 expressed protein -


Gene co-expression network
sample Sobic004G297400 Sobic004G297400 Sobic009G027000 Sobic009G027000 Sobic004G297400--Sobic009G027000 Sobic001G028700 Sobic001G028700 Sobic004G297400--Sobic001G028700 Sobic006G122400 Sobic006G122400 Sobic004G297400--Sobic006G122400 Sobic010G078100 Sobic010G078100 Sobic004G297400--Sobic010G078100 Sobic010G042900 Sobic010G042900 Sobic004G297400--Sobic010G042900 Sobic008G160700 Sobic008G160700 Sobic004G297400--Sobic008G160700 Sobic001G111366 Sobic001G111366 Sobic004G297400--Sobic001G111366 Sobic007G002200 Sobic007G002200 Sobic004G297400--Sobic007G002200 Sobic001G111500 Sobic001G111500 Sobic004G297400--Sobic001G111500 Sobic009G027000--Sobic006G122400 Sobic005G181000 Sobic005G181000 Sobic009G027000--Sobic005G181000 Sobic009G027000--Sobic008G160700 Sobic009G027000--Sobic004G297400 Sobic009G027000--Sobic010G078100 Sobic007G130600 Sobic007G130600 Sobic009G027000--Sobic007G130600 Sobic001G156100 Sobic001G156100 Sobic009G027000--Sobic001G156100 Sobic007G078000 Sobic007G078000 Sobic009G027000--Sobic007G078000 Sobic004G320000 Sobic004G320000 Sobic009G027000--Sobic004G320000 Sobic001G028700--Sobic001G111366 Sobic001G028700--Sobic001G111500 Sobic001G028700--Sobic004G297400 Sobic001G028700--Sobic010G042900 Sobic009G235900 Sobic009G235900 Sobic001G028700--Sobic009G235900 Sobic004G006300 Sobic004G006300 Sobic001G028700--Sobic004G006300 Sobic004G034400 Sobic004G034400 Sobic001G028700--Sobic004G034400 Sobic006G209500 Sobic006G209500 Sobic001G028700--Sobic006G209500 Sobic001G028700--Sobic009G027000 Sobic006G122400--Sobic009G027000 Sobic010G218100 Sobic010G218100 Sobic006G122400--Sobic010G218100 Sobic006G122400--Sobic005G181000 Sobic002G284200 Sobic002G284200 Sobic006G122400--Sobic002G284200 Sobic006G124900 Sobic006G124900 Sobic006G122400--Sobic006G124900 Sobic002G165300 Sobic002G165300 Sobic006G122400--Sobic002G165300 Sobic006G122400--Sobic007G078000 Sobic010G218500 Sobic010G218500 Sobic006G122400--Sobic010G218500 Sobic006G122400--Sobic007G130600 Sobic010G078100--Sobic008G160700 Sobic002G303000 Sobic002G303000 Sobic010G078100--Sobic002G303000 Sobic009G121100 Sobic009G121100 Sobic010G078100--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic010G078100--Sobic006G214500 Sobic010G078100--Sobic009G027000 Sobic001G359400 Sobic001G359400 Sobic010G078100--Sobic001G359400 Sobic001G373100 Sobic001G373100 Sobic010G078100--Sobic001G373100 Sobic010G078100--Sobic006G122400 Sobic004G295800 Sobic004G295800 Sobic010G078100--Sobic004G295800 Sobic003G093600 Sobic003G093600 Sobic010G042900--Sobic003G093600 Sobic007G023700 Sobic007G023700 Sobic010G042900--Sobic007G023700 Sobic001G347600 Sobic001G347600 Sobic010G042900--Sobic001G347600 Sobic005G007800 Sobic005G007800 Sobic010G042900--Sobic005G007800 Sobic010G042900--Sobic004G034400 Sobic010G042900--Sobic001G028700 Sobic010G042900--Sobic009G235900 Sobic009G117400 Sobic009G117400 Sobic010G042900--Sobic009G117400 Sobic006G129700 Sobic006G129700 Sobic010G042900--Sobic006G129700 Sobic010G001600 Sobic010G001600 Sobic008G160700--Sobic010G001600 Sobic001G194900 Sobic001G194900 Sobic008G160700--Sobic001G194900 Sobic008G160700--Sobic010G078100 Sobic008G160700--Sobic007G130600 Sobic008G160700--Sobic009G235900 Sobic008G160700--Sobic006G214500 Sobic008G160700--Sobic006G124900 Sobic008G160700--Sobic002G303000 Sobic008G160700--Sobic009G027000 Sobic001G111366--Sobic001G111500 Sobic001G111366--Sobic001G028700 Sobic001G111366--Sobic004G006300 Sobic001G111366--Sobic009G235900 Sobic001G111366--Sobic010G042900 Sobic001G154100 Sobic001G154100 Sobic001G111366--Sobic001G154100 Sobic004G256600 Sobic004G256600 Sobic001G111366--Sobic004G256600 Sobic004G153400 Sobic004G153400 Sobic001G111366--Sobic004G153400 Sobic001G111366--Sobic010G001600 Sobic009G054700 Sobic009G054700 Sobic007G002200--Sobic009G054700 Sobic007G002200--Sobic004G320000 Sobic007G154701 Sobic007G154701 Sobic007G002200--Sobic007G154701 Sobic001G031200 Sobic001G031200 Sobic007G002200--Sobic001G031200 Sobic007G002200--Sobic004G297400 Sobic007G002200--Sobic004G034400 Sobic009G237600 Sobic009G237600 Sobic007G002200--Sobic009G237600 Sobic009G030100 Sobic009G030100 Sobic007G002200--Sobic009G030100 Sobic001G149700 Sobic001G149700 Sobic007G002200--Sobic001G149700 Sobic001G111500--Sobic001G111366 Sobic001G111500--Sobic001G028700 Sobic001G111500--Sobic001G154100 Sobic001G111500--Sobic004G153400 Sobic001G111500--Sobic004G006300 Sobic003G093300 Sobic003G093300 Sobic001G111500--Sobic003G093300 Sobic001G111500--Sobic010G042900 Sobic001G111500--Sobic004G297400 Sobic001G111500--Sobic009G235900
Octagon: transcription factors


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