Gene annotation
Transcriptome id Sobic.008G094700.1
Synonym VNI2, NAC083, Sb08g014060, ANAC083
Functional annotation no apical meristem protein, putative, expressed
UniProt C5YNL7
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G13180 : NAC domain containing protein 83
RAP-DB (Rice) LOC_Os12g29330.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a054134
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G094700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
2 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -
3 Sobic.004G275200 zinc-binding protein, putative, expressed -
4 Sobic.007G154701 - -
5 Sobic.006G152600 - -
6 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
7 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
8 Sobic.003G127400 BSD domain-containing protein, putative, expressed -
9 Sobic.002G241400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.009G137800 expressed protein -
11 Sobic.002G020800 expressed protein -
12 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.007G002200 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
14 Sobic.003G044200 C2 domain containing protein, putative, expressed -
15 Sobic.003G413500 expressed protein -
16 Sobic.004G207300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
17 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
18 Sobic.008G090600 expressed protein -
19 Sobic.009G011700 protein kinase APK1A, chloroplast precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.001G523866 - -


Gene co-expression network
sample Sobic008G094700 Sobic008G094700 Sobic004G153600 Sobic004G153600 Sobic008G094700--Sobic004G153600 Sobic003G379700 Sobic003G379700 Sobic008G094700--Sobic003G379700 Sobic004G275200 Sobic004G275200 Sobic008G094700--Sobic004G275200 Sobic007G154701 Sobic007G154701 Sobic008G094700--Sobic007G154701 Sobic006G152600 Sobic006G152600 Sobic008G094700--Sobic006G152600 Sobic003G081100 Sobic003G081100 Sobic008G094700--Sobic003G081100 Sobic001G076000 Sobic001G076000 Sobic008G094700--Sobic001G076000 Sobic003G127400 Sobic003G127400 Sobic008G094700--Sobic003G127400 Sobic002G241400 Sobic002G241400 Sobic008G094700--Sobic002G241400 Sobic001G424700 Sobic001G424700 Sobic004G153600--Sobic001G424700 Sobic004G153600--Sobic003G081100 Sobic003G333600 Sobic003G333600 Sobic004G153600--Sobic003G333600 Sobic009G137800 Sobic009G137800 Sobic004G153600--Sobic009G137800 Sobic010G260500 Sobic010G260500 Sobic004G153600--Sobic010G260500 Sobic007G078000 Sobic007G078000 Sobic004G153600--Sobic007G078000 Sobic003G324000 Sobic003G324000 Sobic004G153600--Sobic003G324000 Sobic002G284200 Sobic002G284200 Sobic004G153600--Sobic002G284200 Sobic004G153600--Sobic008G094700 Sobic003G379700--Sobic001G076000 Sobic003G396000 Sobic003G396000 Sobic003G379700--Sobic003G396000 Sobic003G379700--Sobic008G094700 Sobic005G105000 Sobic005G105000 Sobic003G379700--Sobic005G105000 Sobic006G218700 Sobic006G218700 Sobic003G379700--Sobic006G218700 Sobic001G478300 Sobic001G478300 Sobic003G379700--Sobic001G478300 Sobic004G320000 Sobic004G320000 Sobic003G379700--Sobic004G320000 Sobic003G044200 Sobic003G044200 Sobic003G379700--Sobic003G044200 Sobic009G011700 Sobic009G011700 Sobic003G379700--Sobic009G011700 Sobic004G275200--Sobic006G152600 Sobic007G148200 Sobic007G148200 Sobic004G275200--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic004G275200--Sobic001G293800 Sobic004G275200--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic001G377000 Sobic001G377000 Sobic004G275200--Sobic001G377000 Sobic005G129400 Sobic005G129400 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic004G325900 Sobic004G325900 Sobic007G154701--Sobic004G325900 Sobic009G022000 Sobic009G022000 Sobic007G154701--Sobic009G022000 Sobic007G002200 Sobic007G002200 Sobic007G154701--Sobic007G002200 Sobic001G225100 Sobic001G225100 Sobic007G154701--Sobic001G225100 Sobic007G154701--Sobic008G094700 Sobic007G154701--Sobic004G153600 Sobic007G154701--Sobic001G076000 Sobic001G247400 Sobic001G247400 Sobic007G154701--Sobic001G247400 Sobic009G183500 Sobic009G183500 Sobic007G154701--Sobic009G183500 Sobic006G152600--Sobic004G275200 Sobic006G152600--Sobic007G148200 Sobic006G152600--Sobic005G129400 Sobic002G226000 Sobic002G226000 Sobic006G152600--Sobic002G226000 Sobic006G152600--Sobic004G153600 Sobic006G152600--Sobic008G094700 Sobic002G020800 Sobic002G020800 Sobic006G152600--Sobic002G020800 Sobic001G465100 Sobic001G465100 Sobic006G152600--Sobic001G465100 Sobic006G152600--Sobic007G154701 Sobic003G081100--Sobic004G153600 Sobic003G079900 Sobic003G079900 Sobic003G081100--Sobic003G079900 Sobic003G081100--Sobic009G137800 Sobic003G081100--Sobic003G333600 Sobic001G351700 Sobic001G351700 Sobic003G081100--Sobic001G351700 Sobic001G290200 Sobic001G290200 Sobic003G081100--Sobic001G290200 Sobic003G305400 Sobic003G305400 Sobic003G081100--Sobic003G305400 Sobic007G026500 Sobic007G026500 Sobic003G081100--Sobic007G026500 Sobic003G081100--Sobic001G424700 Sobic001G149700 Sobic001G149700 Sobic001G076000--Sobic001G149700 Sobic001G076000--Sobic001G478300 Sobic008G142700 Sobic008G142700 Sobic001G076000--Sobic008G142700 Sobic001G076000--Sobic003G379700 Sobic001G427800 Sobic001G427800 Sobic001G076000--Sobic001G427800 Sobic001G441600 Sobic001G441600 Sobic001G076000--Sobic001G441600 Sobic010G071200 Sobic010G071200 Sobic001G076000--Sobic010G071200 Sobic006G257900 Sobic006G257900 Sobic001G076000--Sobic006G257900 Sobic003G116700 Sobic003G116700 Sobic001G076000--Sobic003G116700 Sobic001G512900 Sobic001G512900 Sobic003G127400--Sobic001G512900 Sobic009G246950 Sobic009G246950 Sobic003G127400--Sobic009G246950 Sobic004G305600 Sobic004G305600 Sobic003G127400--Sobic004G305600 Sobic002G256300 Sobic002G256300 Sobic003G127400--Sobic002G256300 Sobic001G078500 Sobic001G078500 Sobic003G127400--Sobic001G078500 Sobic003G000800 Sobic003G000800 Sobic003G127400--Sobic003G000800 Sobic003G127400--Sobic008G142700 Sobic009G171700 Sobic009G171700 Sobic003G127400--Sobic009G171700 Sobic010G168600 Sobic010G168600 Sobic003G127400--Sobic010G168600 Sobic002G241400--Sobic008G094700 Sobic002G241400--Sobic002G130700 Sobic005G217200 Sobic005G217200 Sobic002G241400--Sobic005G217200 Sobic004G067200 Sobic004G067200 Sobic002G241400--Sobic004G067200 Sobic008G074700 Sobic008G074700 Sobic002G241400--Sobic008G074700 Sobic001G236200 Sobic001G236200 Sobic002G241400--Sobic001G236200 Sobic001G385800 Sobic001G385800 Sobic002G241400--Sobic001G385800 Sobic001G180900 Sobic001G180900 Sobic002G241400--Sobic001G180900 Sobic005G091600 Sobic005G091600 Sobic002G241400--Sobic005G091600
Octagon: transcription factors


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