Gene annotation
Transcriptome id Sobic.001G523866.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBP5
Pfam -
Panther DB PTHR34193 PTHR34193:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g03440.1 : expressed protein
MaizeGDB (Corn) Zm00025a000349 , Zm00025a053489
Brachypodium -
Barley -
Wheat TraesCS4D02G315300 , TraesCS4B02G318800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G413500 expressed protein -
2 Sobic.008G094700 no apical meristem protein, putative, expressed -
3 Sobic.002G241400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
5 Sobic.003G094000 fruit protein PKIWI502, putative, expressed -
6 Sobic.004G275200 zinc-binding protein, putative, expressed -
7 Sobic.001G503300 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.010G174500 protein kinase family protein, putative, expressed -
9 Sobic.001G318900 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.001G469500 transporter family protein, putative, expressed -
11 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
12 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
13 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.010G221032 - -
15 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
16 Sobic.008G042500 expressed protein -
17 Sobic.003G044200 C2 domain containing protein, putative, expressed -
18 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
19 Sobic.005G105000 STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic001G523866 Sobic001G523866 Sobic003G413500 Sobic003G413500 Sobic001G523866--Sobic003G413500 Sobic008G094700 Sobic008G094700 Sobic001G523866--Sobic008G094700 Sobic002G241400 Sobic002G241400 Sobic001G523866--Sobic002G241400 Sobic001G180900 Sobic001G180900 Sobic001G523866--Sobic001G180900 Sobic003G094000 Sobic003G094000 Sobic001G523866--Sobic003G094000 Sobic004G275200 Sobic004G275200 Sobic001G523866--Sobic004G275200 Sobic001G503300 Sobic001G503300 Sobic001G523866--Sobic001G503300 Sobic010G174500 Sobic010G174500 Sobic001G523866--Sobic010G174500 Sobic001G318900 Sobic001G318900 Sobic001G523866--Sobic001G318900 Sobic001G387600 Sobic001G387600 Sobic003G413500--Sobic001G387600 Sobic003G413500--Sobic010G174500 Sobic003G413500--Sobic001G503300 Sobic004G234900 Sobic004G234900 Sobic003G413500--Sobic004G234900 Sobic009G032400 Sobic009G032400 Sobic003G413500--Sobic009G032400 Sobic010G009400 Sobic010G009400 Sobic003G413500--Sobic010G009400 Sobic003G413500--Sobic001G180900 Sobic010G265800 Sobic010G265800 Sobic003G413500--Sobic010G265800 Sobic001G372500 Sobic001G372500 Sobic003G413500--Sobic001G372500 Sobic004G153600 Sobic004G153600 Sobic008G094700--Sobic004G153600 Sobic003G379700 Sobic003G379700 Sobic008G094700--Sobic003G379700 Sobic008G094700--Sobic004G275200 Sobic007G154701 Sobic007G154701 Sobic008G094700--Sobic007G154701 Sobic006G152600 Sobic006G152600 Sobic008G094700--Sobic006G152600 Sobic003G081100 Sobic003G081100 Sobic008G094700--Sobic003G081100 Sobic001G076000 Sobic001G076000 Sobic008G094700--Sobic001G076000 Sobic003G127400 Sobic003G127400 Sobic008G094700--Sobic003G127400 Sobic008G094700--Sobic002G241400 Sobic002G241400--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic002G241400--Sobic002G130700 Sobic005G217200 Sobic005G217200 Sobic002G241400--Sobic005G217200 Sobic004G067200 Sobic004G067200 Sobic002G241400--Sobic004G067200 Sobic008G074700 Sobic008G074700 Sobic002G241400--Sobic008G074700 Sobic001G236200 Sobic001G236200 Sobic002G241400--Sobic001G236200 Sobic001G385800 Sobic001G385800 Sobic002G241400--Sobic001G385800 Sobic002G241400--Sobic001G180900 Sobic005G091600 Sobic005G091600 Sobic002G241400--Sobic005G091600 Sobic006G034000 Sobic006G034000 Sobic001G180900--Sobic006G034000 Sobic001G180900--Sobic004G234900 Sobic002G378800 Sobic002G378800 Sobic001G180900--Sobic002G378800 Sobic009G079300 Sobic009G079300 Sobic001G180900--Sobic009G079300 Sobic009G126900 Sobic009G126900 Sobic001G180900--Sobic009G126900 Sobic004G274400 Sobic004G274400 Sobic001G180900--Sobic004G274400 Sobic006G225600 Sobic006G225600 Sobic001G180900--Sobic006G225600 Sobic008G110600 Sobic008G110600 Sobic001G180900--Sobic008G110600 Sobic003G126300 Sobic003G126300 Sobic001G180900--Sobic003G126300 Sobic003G094000--Sobic001G523866 Sobic003G094000--Sobic003G413500 Sobic003G094000--Sobic010G174500 Sobic003G094000--Sobic001G180900 Sobic007G002600 Sobic007G002600 Sobic003G094000--Sobic007G002600 Sobic003G039700 Sobic003G039700 Sobic003G094000--Sobic003G039700 Sobic001G440600 Sobic001G440600 Sobic003G094000--Sobic001G440600 Sobic003G363100 Sobic003G363100 Sobic003G094000--Sobic003G363100 Sobic006G258800 Sobic006G258800 Sobic003G094000--Sobic006G258800 Sobic004G275200--Sobic006G152600 Sobic007G148200 Sobic007G148200 Sobic004G275200--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic004G275200--Sobic001G293800 Sobic004G275200--Sobic008G094700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic001G377000 Sobic001G377000 Sobic004G275200--Sobic001G377000 Sobic005G129400 Sobic005G129400 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic001G503300--Sobic010G174500 Sobic001G503300--Sobic004G234900 Sobic001G098200 Sobic001G098200 Sobic001G503300--Sobic001G098200 Sobic006G209400 Sobic006G209400 Sobic001G503300--Sobic006G209400 Sobic001G503300--Sobic003G413500 Sobic001G516100 Sobic001G516100 Sobic001G503300--Sobic001G516100 Sobic001G414500 Sobic001G414500 Sobic001G503300--Sobic001G414500 Sobic006G092400 Sobic006G092400 Sobic001G503300--Sobic006G092400 Sobic003G044200 Sobic003G044200 Sobic001G503300--Sobic003G044200 Sobic010G174500--Sobic004G234900 Sobic010G174500--Sobic003G413500 Sobic010G174500--Sobic001G503300 Sobic010G174500--Sobic006G092400 Sobic010G174500--Sobic006G225600 Sobic002G130800 Sobic002G130800 Sobic010G174500--Sobic002G130800 Sobic005G105000 Sobic005G105000 Sobic010G174500--Sobic005G105000 Sobic010G174500--Sobic001G180900 Sobic009G138100 Sobic009G138100 Sobic010G174500--Sobic009G138100 Sobic003G376200 Sobic003G376200 Sobic001G318900--Sobic003G376200 Sobic003G276000 Sobic003G276000 Sobic001G318900--Sobic003G276000 Sobic001G146200 Sobic001G146200 Sobic001G318900--Sobic001G146200 Sobic002G273700 Sobic002G273700 Sobic001G318900--Sobic002G273700 Sobic001G318900--Sobic003G363100 Sobic001G454200 Sobic001G454200 Sobic001G318900--Sobic001G454200 Sobic006G246300 Sobic006G246300 Sobic001G318900--Sobic006G246300 Sobic010G018100 Sobic010G018100 Sobic001G318900--Sobic010G018100 Sobic001G318900--Sobic005G217200
Octagon: transcription factors


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