Gene annotation
Transcriptome id Sobic.005G217200.1,Sobic.005G217200.2
Synonym AtMYB78, Sb05g026820, MYB78
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt A0A1Z5RJT3 , C5Y7Z0
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF548
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48000 : myb domain protein 112
RAP-DB (Rice) LOC_Os12g37690.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023641 , Zm00025a056586 , Zm00025a055223 , Zm00025a020983 , Zm00025a053274 , Zm00025a014457 , Zm00025a009985 , Zm00025a026626 , Zm00025a004179 , Zm00025a032132 , Zm00025a037328 , Zm00025a035541 , Zm00025a034021 , Zm00025a034217 , Zm00025a048371 , Zm00025a053397 , Zm00025a025444 , Zm00025a039543 , Zm00025a041887 , Zm00025a024262 , Zm00025a014898 , Zm00025a017369 , Zm00025a043868 , Zm00025a015471 , Zm00025a029124 , Zm00025a018024 , Zm00025a007095 , Zm00025a005685 , Zm00025a000572 , Zm00025a010442 , Zm00025a025715 , Zm00025a032658 , Zm00025a056901
Brachypodium PNT69079 , KQJ86312 , KQK07949 , KQK21947 , KQJ92025 , KQJ89177 , KQJ98746 , KQK02877 , KQK00366 , KQJ87229 , KQJ83761 , KQK20023 , KQK20025 , KQK20024 , KQK06100 , KQK20026 , PNT76712 , PNT76711 , KQK10836 , KQK15782 , KQJ89311 , KQK00512 , KQJ84313 , KQK19995 , PNT76695 , KQK23714 , KQJ83493
Barley HORVU7Hr1G072450.2 , HORVU0Hr1G005100.1 , HORVU0Hr1G005100.2 , HORVU0Hr1G005100.3 , HORVU2Hr1G041300.4 , HORVU2Hr1G041300.2 , HORVU2Hr1G041300.3 , HORVU2Hr1G106140.1 , HORVU2Hr1G106140.2 , HORVU2Hr1G106140.3 , HORVU5Hr1G083910.2 , HORVU5Hr1G083910.3 , HORVU5Hr1G083910.4 , HORVU5Hr1G083910.5 , HORVU5Hr1G083910.6 , HORVU5Hr1G083910.7 , HORVU5Hr1G083910.9 , HORVU7Hr1G072450.3 , HORVU4Hr1G084360.3 , HORVU4Hr1G084360.2 , HORVU4Hr1G084360.1 , HORVU7Hr1G003490.2 , HORVU6Hr1G057670.3 , HORVU6Hr1G057670.1 , HORVU5Hr1G083910.12 , HORVU5Hr1G083910.10 , HORVU5Hr1G083910.11 , HORVU5Hr1G083910.14 , HORVU3Hr1G082210.8 , HORVU3Hr1G082210.2 , HORVU3Hr1G082210.3 , HORVU3Hr1G082210.1 , HORVU3Hr1G082210.6 , HORVU3Hr1G082210.7 , HORVU3Hr1G082210.4 , HORVU3Hr1G082210.5 , HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU5Hr1G022690.8 , HORVU5Hr1G022690.9 , HORVU5Hr1G022690.6 , HORVU5Hr1G022690.7 , HORVU5Hr1G022690.4 , HORVU5Hr1G022690.5 , HORVU5Hr1G022690.2 , HORVU5Hr1G022690.3 , HORVU5Hr1G022690.1 , HORVU3Hr1G004050.2 , HORVU3Hr1G004050.3 , HORVU3Hr1G004050.1 , HORVU6Hr1G060650.6 , HORVU6Hr1G060650.5 , HORVU6Hr1G060650.4 , HORVU6Hr1G060650.3 , HORVU6Hr1G060650.2 , HORVU6Hr1G060650.1 , HORVU7Hr1G027370.1 , HORVU7Hr1G027370.2 , HORVU5Hr1G022690.10 , HORVU5Hr1G022690.11 , HORVU5Hr1G022690.12 , HORVU4Hr1G028780.3 , HORVU4Hr1G028780.2 , HORVU4Hr1G028780.1 , HORVU4Hr1G028780.7 , HORVU4Hr1G028780.6 , HORVU4Hr1G028780.5 , HORVU4Hr1G028780.4 , HORVU4Hr1G028780.8 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU3Hr1G092820.1 , HORVU3Hr1G092820.2 , HORVU3Hr1G092820.3 , HORVU1Hr1G074260.1 , HORVU1Hr1G074260.2 , HORVU1Hr1G074260.3 , HORVU1Hr1G074260.4 , HORVU1Hr1G074260.5 , HORVU1Hr1G074260.6 , HORVU1Hr1G074260.7 , HORVU2Hr1G091630.3 , HORVU2Hr1G091630.2 , HORVU6Hr1G026450.3 , HORVU6Hr1G026450.2 , HORVU6Hr1G026450.1 , HORVU2Hr1G087990.2 , HORVU2Hr1G087990.1 , HORVU3Hr1G016940.1
Wheat TraesCS4D02G339100 , TraesCS4A02G459200 , TraesCS2D02G446100 , TraesCS3D02G094500 , TraesCS2D02G209600 , TraesCS2D02G446000 , TraesCS6D02G207300 , TraesCS4B02G096500 , TraesCS2D02G446500 , TraesCS5B02G330100 , TraesCS2A02G363800 , TraesCS1A02G268800 , TraesCS2A02G206400 , TraesCS3B02G109800 , TraesCS4B02G344000 , TraesCS7A02G030600 , TraesCS2D02G446400 , TraesCS4A02G459100 , TraesCS7D02G026800 , TraesCS4A02G172200 , TraesCS5D02G335700 , TraesCS2A02G447600 , TraesCS5A02G512700 , TraesCS2B02G387000 , TraesCSU02G069000 , TraesCS5A02G111300 , TraesCS5A02G329900 , TraesCS5D02G128200 , TraesCS5D02G128200 , TraesCS2B02G468000 , TraesCS7B02G031000 , TraesCS2A02G447300 , TraesCS5B02G093000 , TraesCS3B02G039100 , TraesCS7A02G030800 , TraesCS7A02G030700 , TraesCS3A02G384400 , TraesCS1B02G279400 , TraesCS4A02G217800 , TraesCS5D02G099100 , TraesCS6B02G254200 , TraesCS2A02G447400 , TraesCS6D02G219500 , TraesCS6B02G265400 , TraesCS6A02G227700 , TraesCS7D02G026900 , TraesCS4D02G142900 , TraesCS1D02G268900 , TraesCS3D02G377300 , TraesCS5B02G119300 , TraesCS2D02G361600 , TraesCS2D02G366400 , TraesCS3D02G014800 , TraesCS6A02G236900 , TraesCS2A02G370000 , TraesCS3A02G044700 , TraesCS7D02G300000 , TraesCS7D02G300000 , TraesCS3D02G036200 , TraesCS7D02G027000 , TraesCS2B02G381800 , TraesCS4D02G359100 , TraesCS7D02G130100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.010G210200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
3 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
4 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
5 Sobic.004G237600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
6 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
7 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
8 Sobic.010G162900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
9 Sobic.002G172900 OBP32pep, putative, expressed -
10 Sobic.002G024200 lectin-like receptor kinase, putative, expressed -
11 Sobic.002G035200 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
12 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
13 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
14 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
15 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
16 Sobic.001G469500 transporter family protein, putative, expressed -
17 Sobic.010G043400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.010G018100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
19 Sobic.001G363300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.003G216232 - -


Gene co-expression network
sample Sobic005G217200 Sobic005G217200 Sobic008G189200 Sobic008G189200 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic003G363100 Sobic003G363100 Sobic005G217200--Sobic003G363100 Sobic009G126900 Sobic009G126900 Sobic005G217200--Sobic009G126900 Sobic004G237600 Sobic004G237600 Sobic005G217200--Sobic004G237600 Sobic003G276000 Sobic003G276000 Sobic005G217200--Sobic003G276000 Sobic003G244600 Sobic003G244600 Sobic005G217200--Sobic003G244600 Sobic010G162900 Sobic010G162900 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900 Sobic008G189200--Sobic003G244600 Sobic008G190900 Sobic008G190900 Sobic008G189200--Sobic008G190900 Sobic008G189200--Sobic005G217200 Sobic010G043400 Sobic010G043400 Sobic008G189200--Sobic010G043400 Sobic008G189200--Sobic009G126900 Sobic002G274800 Sobic002G274800 Sobic008G189200--Sobic002G274800 Sobic007G092700 Sobic007G092700 Sobic008G189200--Sobic007G092700 Sobic003G105800 Sobic003G105800 Sobic008G189200--Sobic003G105800 Sobic001G150200 Sobic001G150200 Sobic008G189200--Sobic001G150200 Sobic006G132500 Sobic006G132500 Sobic010G210200--Sobic006G132500 Sobic001G132000 Sobic001G132000 Sobic010G210200--Sobic001G132000 Sobic005G215900 Sobic005G215900 Sobic010G210200--Sobic005G215900 Sobic009G167700 Sobic009G167700 Sobic010G210200--Sobic009G167700 Sobic003G061800 Sobic003G061800 Sobic010G210200--Sobic003G061800 Sobic003G442500 Sobic003G442500 Sobic010G210200--Sobic003G442500 Sobic010G210200--Sobic005G217200 Sobic009G210600 Sobic009G210600 Sobic010G210200--Sobic009G210600 Sobic003G061400 Sobic003G061400 Sobic010G210200--Sobic003G061400 Sobic001G469500 Sobic001G469500 Sobic003G363100--Sobic001G469500 Sobic003G363100--Sobic005G217200 Sobic010G018100 Sobic010G018100 Sobic003G363100--Sobic010G018100 Sobic009G000200 Sobic009G000200 Sobic003G363100--Sobic009G000200 Sobic003G363100--Sobic008G189200 Sobic007G135000 Sobic007G135000 Sobic003G363100--Sobic007G135000 Sobic004G028600 Sobic004G028600 Sobic003G363100--Sobic004G028600 Sobic003G363100--Sobic002G274800 Sobic003G363100--Sobic003G276000 Sobic009G126900--Sobic010G043400 Sobic002G270500 Sobic002G270500 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic006G271200 Sobic006G271200 Sobic009G126900--Sobic006G271200 Sobic001G003000 Sobic001G003000 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic003G005600 Sobic003G005600 Sobic009G126900--Sobic003G005600 Sobic003G329400 Sobic003G329400 Sobic009G126900--Sobic003G329400 Sobic004G101900 Sobic004G101900 Sobic009G126900--Sobic004G101900 Sobic001G123000 Sobic001G123000 Sobic004G237600--Sobic001G123000 Sobic001G180900 Sobic001G180900 Sobic004G237600--Sobic001G180900 Sobic006G176600 Sobic006G176600 Sobic004G237600--Sobic006G176600 Sobic006G034000 Sobic006G034000 Sobic004G237600--Sobic006G034000 Sobic006G148200 Sobic006G148200 Sobic004G237600--Sobic006G148200 Sobic004G234900 Sobic004G234900 Sobic004G237600--Sobic004G234900 Sobic002G361300 Sobic002G361300 Sobic004G237600--Sobic002G361300 Sobic006G225600 Sobic006G225600 Sobic004G237600--Sobic006G225600 Sobic001G323000 Sobic001G323000 Sobic004G237600--Sobic001G323000 Sobic003G276000--Sobic010G162900 Sobic008G090800 Sobic008G090800 Sobic003G276000--Sobic008G090800 Sobic001G454200 Sobic001G454200 Sobic003G276000--Sobic001G454200 Sobic003G276000--Sobic005G217200 Sobic003G276000--Sobic008G189200 Sobic003G000600 Sobic003G000600 Sobic003G276000--Sobic003G000600 Sobic003G276000--Sobic010G018100 Sobic003G276000--Sobic003G363100 Sobic001G318900 Sobic001G318900 Sobic003G276000--Sobic001G318900 Sobic003G244600--Sobic008G189200 Sobic006G030700 Sobic006G030700 Sobic003G244600--Sobic006G030700 Sobic002G304000 Sobic002G304000 Sobic003G244600--Sobic002G304000 Sobic006G091700 Sobic006G091700 Sobic003G244600--Sobic006G091700 Sobic003G244600--Sobic003G105800 Sobic005G216000 Sobic005G216000 Sobic003G244600--Sobic005G216000 Sobic007G186200 Sobic007G186200 Sobic003G244600--Sobic007G186200 Sobic001G015500 Sobic001G015500 Sobic003G244600--Sobic001G015500 Sobic009G226300 Sobic009G226300 Sobic003G244600--Sobic009G226300 Sobic010G162900--Sobic003G276000 Sobic007G035000 Sobic007G035000 Sobic010G162900--Sobic007G035000 Sobic010G162900--Sobic008G189200 Sobic010G162900--Sobic008G190900 Sobic010G162900--Sobic005G217200 Sobic010G162900--Sobic001G454200 Sobic010G162900--Sobic010G018100 Sobic007G225900 Sobic007G225900 Sobic010G162900--Sobic007G225900 Sobic010G162900--Sobic002G274800 Sobic002G172900--Sobic009G126900 Sobic002G172900--Sobic001G180900 Sobic008G110600 Sobic008G110600 Sobic002G172900--Sobic008G110600 Sobic001G397400 Sobic001G397400 Sobic002G172900--Sobic001G397400 Sobic002G172900--Sobic008G190900 Sobic002G378800 Sobic002G378800 Sobic002G172900--Sobic002G378800 Sobic001G474700 Sobic001G474700 Sobic002G172900--Sobic001G474700 Sobic002G172900--Sobic006G034000 Sobic002G172900--Sobic003G005600
Octagon: transcription factors


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