Gene annotation
Transcriptome id Sobic.002G024200.1
Synonym Sb02g002240, RLK
Functional annotation lectin-like receptor kinase, putative, expressed
UniProt C5X8T0
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF32
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37710 : receptor lectin kinase
RAP-DB (Rice) LOC_Os07g03830.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a050569 , Zm00025a016193 , Zm00025a006799 , Zm00025a006800
Brachypodium KQJ96879
Barley HORVU2Hr1G120660.9 , HORVU2Hr1G120660.8 , HORVU2Hr1G120660.7 , HORVU2Hr1G120660.11 , HORVU2Hr1G120660.10 , HORVU7Hr1G000530.1
Wheat TraesCS3B02G119300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
3 Sobic.003G105800 No apical meristem protein, putative, expressed -
4 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
6 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
9 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
10 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
11 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
12 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
13 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
14 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
15 Sobic.006G030700 receptor kinase, putative, expressed -
16 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
17 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G150200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK53b - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic002G024200 Sobic002G024200 Sobic009G161000 Sobic009G161000 Sobic002G024200--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic002G024200--Sobic005G178100 Sobic003G105800 Sobic003G105800 Sobic002G024200--Sobic003G105800 Sobic003G244600 Sobic003G244600 Sobic002G024200--Sobic003G244600 Sobic001G305800 Sobic001G305800 Sobic002G024200--Sobic001G305800 Sobic009G226300 Sobic009G226300 Sobic002G024200--Sobic009G226300 Sobic004G260000 Sobic004G260000 Sobic002G024200--Sobic004G260000 Sobic008G062200 Sobic008G062200 Sobic002G024200--Sobic008G062200 Sobic002G304000 Sobic002G304000 Sobic002G024200--Sobic002G304000 Sobic009G161000--Sobic005G178100 Sobic004G101900 Sobic004G101900 Sobic009G161000--Sobic004G101900 Sobic001G325200 Sobic001G325200 Sobic009G161000--Sobic001G325200 Sobic006G100332 Sobic006G100332 Sobic009G161000--Sobic006G100332 Sobic009G161000--Sobic003G105800 Sobic009G161000--Sobic004G260000 Sobic009G161000--Sobic009G226300 Sobic009G161000--Sobic001G305800 Sobic004G124200 Sobic004G124200 Sobic009G161000--Sobic004G124200 Sobic005G178100--Sobic009G161000 Sobic005G178100--Sobic001G305800 Sobic003G087200 Sobic003G087200 Sobic005G178100--Sobic003G087200 Sobic002G420700 Sobic002G420700 Sobic005G178100--Sobic002G420700 Sobic001G015500 Sobic001G015500 Sobic005G178100--Sobic001G015500 Sobic005G178100--Sobic003G105800 Sobic009G034700 Sobic009G034700 Sobic005G178100--Sobic009G034700 Sobic003G184900 Sobic003G184900 Sobic005G178100--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic005G178100--Sobic001G150600 Sobic003G105800--Sobic003G184900 Sobic008G079300 Sobic008G079300 Sobic003G105800--Sobic008G079300 Sobic004G321800 Sobic004G321800 Sobic003G105800--Sobic004G321800 Sobic003G105800--Sobic001G325200 Sobic003G105800--Sobic002G304000 Sobic007G225900 Sobic007G225900 Sobic003G105800--Sobic007G225900 Sobic003G105800--Sobic006G100332 Sobic003G105800--Sobic003G087200 Sobic003G105800--Sobic009G226300 Sobic008G189200 Sobic008G189200 Sobic003G244600--Sobic008G189200 Sobic006G030700 Sobic006G030700 Sobic003G244600--Sobic006G030700 Sobic003G244600--Sobic002G304000 Sobic006G091700 Sobic006G091700 Sobic003G244600--Sobic006G091700 Sobic003G244600--Sobic003G105800 Sobic005G216000 Sobic005G216000 Sobic003G244600--Sobic005G216000 Sobic007G186200 Sobic007G186200 Sobic003G244600--Sobic007G186200 Sobic003G244600--Sobic001G015500 Sobic003G244600--Sobic009G226300 Sobic001G305800--Sobic005G178100 Sobic001G305800--Sobic006G030700 Sobic001G305800--Sobic001G150600 Sobic001G305800--Sobic009G161000 Sobic001G305800--Sobic006G100332 Sobic001G305800--Sobic003G087200 Sobic001G305800--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic001G305800--Sobic009G054500 Sobic007G092900 Sobic007G092900 Sobic001G305800--Sobic007G092900 Sobic009G226300--Sobic009G054500 Sobic001G249300 Sobic001G249300 Sobic009G226300--Sobic001G249300 Sobic007G187300 Sobic007G187300 Sobic009G226300--Sobic007G187300 Sobic009G226300--Sobic006G030700 Sobic003G148800 Sobic003G148800 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic009G226300--Sobic001G325200 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic005G018500 Sobic005G018500 Sobic004G260000--Sobic005G018500 Sobic004G260000--Sobic009G054500 Sobic004G260000--Sobic009G226300 Sobic004G255000 Sobic004G255000 Sobic004G260000--Sobic004G255000 Sobic004G260000--Sobic001G249300 Sobic004G260000--Sobic008G062200 Sobic004G260000--Sobic007G187300 Sobic003G219600 Sobic003G219600 Sobic004G260000--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic004G260000--Sobic009G211400 Sobic003G355600 Sobic003G355600 Sobic008G062200--Sobic003G355600 Sobic008G062200--Sobic009G226300 Sobic008G062200--Sobic002G304000 Sobic008G062200--Sobic009G054500 Sobic008G062200--Sobic004G260000 Sobic008G062200--Sobic001G325200 Sobic008G062200--Sobic004G101900 Sobic009G193700 Sobic009G193700 Sobic008G062200--Sobic009G193700 Sobic008G062200--Sobic003G148800 Sobic002G304000--Sobic009G226300 Sobic002G304000--Sobic009G054500 Sobic002G304000--Sobic004G101900 Sobic002G304000--Sobic003G148800 Sobic002G215700 Sobic002G215700 Sobic002G304000--Sobic002G215700 Sobic002G304000--Sobic008G062200 Sobic002G304000--Sobic001G325200 Sobic002G304000--Sobic003G355600 Sobic002G304000--Sobic003G105800
Octagon: transcription factors


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