Gene annotation
Transcriptome id Sobic.002G172900.2,Sobic.002G172900.3
Synonym
Functional annotation OBP32pep, putative, expressed
UniProt A0A1B6QBY8
Pfam PF02713
Panther DB PTHR31385 PTHR31385:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70480 : Domain of unknown function (DUF220)
RAP-DB (Rice) LOC_Os09g15835.1 : OBP32pep, putative, expressed
MaizeGDB (Corn) Zm00025a013764
Brachypodium -
Barley -
Wheat TraesCS5A02G184700 , TraesCS5A02G184700 , TraesCS5D02G189700 , TraesCS5B02G182700
Populus -


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cDNA sequences
Sobic.002G172900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
2 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
3 Sobic.008G110600 expressed protein -
4 Sobic.001G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
5 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
6 Sobic.002G378800 GRAM domain containing protein, expressed -
7 Sobic.001G474700 expressed protein -
8 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
10 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
11 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
12 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
13 Sobic.010G129600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
14 Sobic.006G002600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
15 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.007G186000 radical SAM enzyme, putative, expressed K01012: biotin synthase
17 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
18 Sobic.009G000200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
19 Sobic.010G210200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
20 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic002G172900 Sobic002G172900 Sobic009G126900 Sobic009G126900 Sobic002G172900--Sobic009G126900 Sobic001G180900 Sobic001G180900 Sobic002G172900--Sobic001G180900 Sobic008G110600 Sobic008G110600 Sobic002G172900--Sobic008G110600 Sobic001G397400 Sobic001G397400 Sobic002G172900--Sobic001G397400 Sobic008G190900 Sobic008G190900 Sobic002G172900--Sobic008G190900 Sobic002G378800 Sobic002G378800 Sobic002G172900--Sobic002G378800 Sobic001G474700 Sobic001G474700 Sobic002G172900--Sobic001G474700 Sobic006G034000 Sobic006G034000 Sobic002G172900--Sobic006G034000 Sobic003G005600 Sobic003G005600 Sobic002G172900--Sobic003G005600 Sobic010G043400 Sobic010G043400 Sobic009G126900--Sobic010G043400 Sobic002G270500 Sobic002G270500 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic006G271200 Sobic006G271200 Sobic009G126900--Sobic006G271200 Sobic001G003000 Sobic001G003000 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic009G126900--Sobic003G005600 Sobic003G329400 Sobic003G329400 Sobic009G126900--Sobic003G329400 Sobic004G101900 Sobic004G101900 Sobic009G126900--Sobic004G101900 Sobic001G180900--Sobic006G034000 Sobic004G234900 Sobic004G234900 Sobic001G180900--Sobic004G234900 Sobic001G180900--Sobic002G378800 Sobic009G079300 Sobic009G079300 Sobic001G180900--Sobic009G079300 Sobic001G180900--Sobic009G126900 Sobic004G274400 Sobic004G274400 Sobic001G180900--Sobic004G274400 Sobic006G225600 Sobic006G225600 Sobic001G180900--Sobic006G225600 Sobic001G180900--Sobic008G110600 Sobic003G126300 Sobic003G126300 Sobic001G180900--Sobic003G126300 Sobic008G110600--Sobic006G034000 Sobic008G110600--Sobic003G126300 Sobic010G130000 Sobic010G130000 Sobic008G110600--Sobic010G130000 Sobic004G178200 Sobic004G178200 Sobic008G110600--Sobic004G178200 Sobic003G036800 Sobic003G036800 Sobic008G110600--Sobic003G036800 Sobic001G091300 Sobic001G091300 Sobic008G110600--Sobic001G091300 Sobic002G427050 Sobic002G427050 Sobic008G110600--Sobic002G427050 Sobic008G093000 Sobic008G093000 Sobic008G110600--Sobic008G093000 Sobic002G427000 Sobic002G427000 Sobic008G110600--Sobic002G427000 Sobic001G408200 Sobic001G408200 Sobic001G397400--Sobic001G408200 Sobic001G397400--Sobic002G172900 Sobic001G156100 Sobic001G156100 Sobic001G397400--Sobic001G156100 Sobic001G023200 Sobic001G023200 Sobic001G397400--Sobic001G023200 Sobic001G427100 Sobic001G427100 Sobic001G397400--Sobic001G427100 Sobic003G009100 Sobic003G009100 Sobic001G397400--Sobic003G009100 Sobic004G162400 Sobic004G162400 Sobic001G397400--Sobic004G162400 Sobic001G397400--Sobic003G005600 Sobic001G397400--Sobic001G474700 Sobic008G189200 Sobic008G189200 Sobic008G190900--Sobic008G189200 Sobic003G105800 Sobic003G105800 Sobic008G190900--Sobic003G105800 Sobic003G252300 Sobic003G252300 Sobic008G190900--Sobic003G252300 Sobic002G274800 Sobic002G274800 Sobic008G190900--Sobic002G274800 Sobic006G086100 Sobic006G086100 Sobic008G190900--Sobic006G086100 Sobic008G190900--Sobic004G162400 Sobic008G190900--Sobic002G172900 Sobic008G190900--Sobic009G126900 Sobic007G225900 Sobic007G225900 Sobic008G190900--Sobic007G225900 Sobic002G378800--Sobic001G180900 Sobic001G057800 Sobic001G057800 Sobic002G378800--Sobic001G057800 Sobic006G114800 Sobic006G114800 Sobic002G378800--Sobic006G114800 Sobic001G323000 Sobic001G323000 Sobic002G378800--Sobic001G323000 Sobic006G217700 Sobic006G217700 Sobic002G378800--Sobic006G217700 Sobic008G090600 Sobic008G090600 Sobic002G378800--Sobic008G090600 Sobic004G102400 Sobic004G102400 Sobic002G378800--Sobic004G102400 Sobic002G378800--Sobic006G034000 Sobic002G378800--Sobic009G126900 Sobic001G474700--Sobic009G126900 Sobic001G474700--Sobic001G427100 Sobic001G373200 Sobic001G373200 Sobic001G474700--Sobic001G373200 Sobic003G195500 Sobic003G195500 Sobic001G474700--Sobic003G195500 Sobic001G474700--Sobic003G005600 Sobic004G295800 Sobic004G295800 Sobic001G474700--Sobic004G295800 Sobic001G474700--Sobic003G036800 Sobic007G024700 Sobic007G024700 Sobic001G474700--Sobic007G024700 Sobic002G132000 Sobic002G132000 Sobic001G474700--Sobic002G132000 Sobic003G312200 Sobic003G312200 Sobic006G034000--Sobic003G312200 Sobic006G034000--Sobic001G323000 Sobic003G436300 Sobic003G436300 Sobic006G034000--Sobic003G436300 Sobic006G148200 Sobic006G148200 Sobic006G034000--Sobic006G148200 Sobic006G034000--Sobic001G180900 Sobic006G034000--Sobic010G130000 Sobic006G034000--Sobic001G091300 Sobic006G034000--Sobic008G110600 Sobic009G228700 Sobic009G228700 Sobic006G034000--Sobic009G228700 Sobic003G005600--Sobic009G126900 Sobic002G304000 Sobic002G304000 Sobic003G005600--Sobic002G304000 Sobic003G005600--Sobic001G003000 Sobic003G005600--Sobic003G329400 Sobic003G005600--Sobic006G271200 Sobic003G005600--Sobic004G101900 Sobic008G062200 Sobic008G062200 Sobic003G005600--Sobic008G062200 Sobic003G005600--Sobic010G043400 Sobic010G064700 Sobic010G064700 Sobic003G005600--Sobic010G064700
Octagon: transcription factors


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