Gene annotation
Transcriptome id Sobic.009G000200.1
Synonym Sb09g000210
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phospholipid-transporting ATPase, putative, expressed
UniProt C5YXW9
Pfam PF00122 PF12710 PF16209 PF16212
Panther DB PTHR24092 PTHR24092:SF65
NCBI CDD -
KEGG Orthology K01530; phospholipid-translocating ATPase
Gene Ontology GO:0000166; nucleotide binding GO:0016021integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT1G68710 : ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
RAP-DB (Rice) LOC_Os05g01030.1 : phospholipid-transporting ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a041028 , Zm00025a042836
Brachypodium KQK08165 , KQJ98120 , KQJ98119
Barley HORVU1Hr1G000140.6 , HORVU1Hr1G000140.4 , HORVU1Hr1G000140.5 , HORVU1Hr1G000140.2 , HORVU1Hr1G000140.3 , HORVU0Hr1G026480.1 , HORVU0Hr1G026480.2 , HORVU0Hr1G026480.3 , HORVU0Hr1G026480.4 , HORVU1Hr1G000140.1 , HORVU7Hr1G087590.6 , HORVU7Hr1G087590.7 , HORVU7Hr1G087590.4 , HORVU7Hr1G087590.3 , HORVU7Hr1G087590.8 , HORVU7Hr1G087590.9 , HORVU7Hr1G087590.10
Wheat TraesCS1D02G004700 , TraesCS1D02G004700 , TraesCS1A02G002500 , TraesCS7A02G360700 , TraesCS1B02G001800 , TraesCS1B02G001800 , TraesCS7D02G362300 , TraesCS7D02G362300 , TraesCS7B02G267000 , TraesCS7B02G267000 , TraesCS7B02G267000 , TraesCS7B02G267000
Populus -


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cDNA sequences
Sobic.009G000200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
2 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
3 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
4 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.006G002600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
6 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.004G125900 ethylene-responsive protein related, putative, expressed -
8 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
9 Sobic.006G149600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@auxin response factor, putative, expressed -
10 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
11 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
12 Sobic.001G273500 leucine-rich repeat receptor-like protein kinase 1, putative, expressed -
13 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
14 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
15 Sobic.007G011700 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
16 Sobic.002G172900 OBP32pep, putative, expressed -
17 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
18 Sobic.002G031100 resistance protein LR10, putative, expressed -
19 Sobic.007G025800 amino acid transporter, putative, expressed -
20 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9


Gene co-expression network
sample Sobic009G000200 Sobic009G000200 Sobic009G079300 Sobic009G079300 Sobic009G000200--Sobic009G079300 Sobic003G316300 Sobic003G316300 Sobic009G000200--Sobic003G316300 Sobic001G386400 Sobic001G386400 Sobic009G000200--Sobic001G386400 Sobic001G298500 Sobic001G298500 Sobic009G000200--Sobic001G298500 Sobic006G002600 Sobic006G002600 Sobic009G000200--Sobic006G002600 Sobic008G189200 Sobic008G189200 Sobic009G000200--Sobic008G189200 Sobic004G125900 Sobic004G125900 Sobic009G000200--Sobic004G125900 Sobic001G180900 Sobic001G180900 Sobic009G000200--Sobic001G180900 Sobic006G149600 Sobic006G149600 Sobic009G000200--Sobic006G149600 Sobic009G079300--Sobic009G000200 Sobic004G236550 Sobic004G236550 Sobic009G079300--Sobic004G236550 Sobic003G126300 Sobic003G126300 Sobic009G079300--Sobic003G126300 Sobic009G079300--Sobic003G316300 Sobic007G025800 Sobic007G025800 Sobic009G079300--Sobic007G025800 Sobic009G079300--Sobic001G180900 Sobic003G272400 Sobic003G272400 Sobic009G079300--Sobic003G272400 Sobic009G136100 Sobic009G136100 Sobic009G079300--Sobic009G136100 Sobic003G367300 Sobic003G367300 Sobic009G079300--Sobic003G367300 Sobic003G316300--Sobic009G000200 Sobic003G316300--Sobic001G386400 Sobic003G316300--Sobic009G079300 Sobic006G119200 Sobic006G119200 Sobic003G316300--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic003G316300--Sobic009G167700 Sobic001G273500 Sobic001G273500 Sobic003G316300--Sobic001G273500 Sobic003G316300--Sobic004G125900 Sobic003G316300--Sobic001G298500 Sobic009G200300 Sobic009G200300 Sobic003G316300--Sobic009G200300 Sobic001G386400--Sobic006G119200 Sobic001G386400--Sobic009G167700 Sobic001G386400--Sobic009G000200 Sobic001G386400--Sobic003G316300 Sobic002G155400 Sobic002G155400 Sobic001G386400--Sobic002G155400 Sobic010G161450 Sobic010G161450 Sobic001G386400--Sobic010G161450 Sobic004G106900 Sobic004G106900 Sobic001G386400--Sobic004G106900 Sobic002G024100 Sobic002G024100 Sobic001G386400--Sobic002G024100 Sobic004G341200 Sobic004G341200 Sobic001G386400--Sobic004G341200 Sobic001G298500--Sobic009G000200 Sobic001G298500--Sobic009G079300 Sobic006G271200 Sobic006G271200 Sobic001G298500--Sobic006G271200 Sobic001G350700 Sobic001G350700 Sobic001G298500--Sobic001G350700 Sobic001G298500--Sobic008G189200 Sobic004G004200 Sobic004G004200 Sobic001G298500--Sobic004G004200 Sobic010G107000 Sobic010G107000 Sobic001G298500--Sobic010G107000 Sobic007G092700 Sobic007G092700 Sobic001G298500--Sobic007G092700 Sobic006G125400 Sobic006G125400 Sobic001G298500--Sobic006G125400 Sobic007G125900 Sobic007G125900 Sobic006G002600--Sobic007G125900 Sobic006G002600--Sobic009G079300 Sobic006G002600--Sobic009G000200 Sobic005G016800 Sobic005G016800 Sobic006G002600--Sobic005G016800 Sobic009G135100 Sobic009G135100 Sobic006G002600--Sobic009G135100 Sobic006G002600--Sobic009G167700 Sobic009G236200 Sobic009G236200 Sobic006G002600--Sobic009G236200 Sobic006G002600--Sobic001G386400 Sobic002G172900 Sobic002G172900 Sobic006G002600--Sobic002G172900 Sobic003G244600 Sobic003G244600 Sobic008G189200--Sobic003G244600 Sobic008G190900 Sobic008G190900 Sobic008G189200--Sobic008G190900 Sobic005G217200 Sobic005G217200 Sobic008G189200--Sobic005G217200 Sobic010G043400 Sobic010G043400 Sobic008G189200--Sobic010G043400 Sobic009G126900 Sobic009G126900 Sobic008G189200--Sobic009G126900 Sobic002G274800 Sobic002G274800 Sobic008G189200--Sobic002G274800 Sobic008G189200--Sobic007G092700 Sobic003G105800 Sobic003G105800 Sobic008G189200--Sobic003G105800 Sobic001G150200 Sobic001G150200 Sobic008G189200--Sobic001G150200 Sobic001G415300 Sobic001G415300 Sobic004G125900--Sobic001G415300 Sobic002G270500 Sobic002G270500 Sobic004G125900--Sobic002G270500 Sobic004G125900--Sobic009G126900 Sobic004G125900--Sobic006G271200 Sobic003G331400 Sobic003G331400 Sobic004G125900--Sobic003G331400 Sobic004G125900--Sobic009G000200 Sobic001G107600 Sobic001G107600 Sobic004G125900--Sobic001G107600 Sobic002G031100 Sobic002G031100 Sobic004G125900--Sobic002G031100 Sobic006G034000 Sobic006G034000 Sobic004G125900--Sobic006G034000 Sobic001G180900--Sobic006G034000 Sobic004G234900 Sobic004G234900 Sobic001G180900--Sobic004G234900 Sobic002G378800 Sobic002G378800 Sobic001G180900--Sobic002G378800 Sobic001G180900--Sobic009G079300 Sobic001G180900--Sobic009G126900 Sobic004G274400 Sobic004G274400 Sobic001G180900--Sobic004G274400 Sobic006G225600 Sobic006G225600 Sobic001G180900--Sobic006G225600 Sobic008G110600 Sobic008G110600 Sobic001G180900--Sobic008G110600 Sobic001G180900--Sobic003G126300 Sobic006G149600--Sobic009G000200 Sobic004G162400 Sobic004G162400 Sobic006G149600--Sobic004G162400 Sobic006G149600--Sobic001G273500 Sobic004G071200 Sobic004G071200 Sobic006G149600--Sobic004G071200 Sobic005G231900 Sobic005G231900 Sobic006G149600--Sobic005G231900 Sobic001G015500 Sobic001G015500 Sobic006G149600--Sobic001G015500 Sobic006G149600--Sobic009G079300 Sobic006G149600--Sobic001G298500 Sobic005G178100 Sobic005G178100 Sobic006G149600--Sobic005G178100
Octagon: transcription factors


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