Gene annotation
Transcriptome id Sobic.001G273500.1
Synonym
Functional annotation leucine-rich repeat receptor-like protein kinase 1, putative, expressed
UniProt A0A1B6QM58
Pfam PF08263 PF00560 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF58
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G35710 : Protein kinase family protein with leucine-rich repeat domain
RAP-DB (Rice) LOC_Os10g33040.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G000660.10 , HORVU1Hr1G000660.20 , HORVU1Hr1G000660.21 , HORVU1Hr1G009600.1 , HORVU1Hr1G015210.1 , HORVU1Hr1G015210.2 , HORVU1Hr1G015210.3 , HORVU1Hr1G015210.4 , HORVU1Hr1G015210.5 , HORVU1Hr1G015210.6 , HORVU1Hr1G015210.7 , HORVU1Hr1G009080.1 , HORVU1Hr1G000660.7 , HORVU1Hr1G000660.6 , HORVU1Hr1G000660.5 , HORVU1Hr1G000660.4 , HORVU1Hr1G000660.3 , HORVU1Hr1G000660.9 , HORVU1Hr1G000660.8 , HORVU1Hr1G000660.12 , HORVU1Hr1G000660.11 , HORVU1Hr1G000660.19 , HORVU1Hr1G000660.18 , HORVU1Hr1G000660.17 , HORVU1Hr1G000660.16
Wheat TraesCS1A02G006000 , TraesCS1B02G009900 , TraesCS1A02G006500 , TraesCS1D02G002700 , TraesCS1A02G006800 , TraesCS1B02G007400 , TraesCS1B02G006500 , TraesCS1A02G007000 , TraesCS3D02G452300 , TraesCS1D02G003000 , TraesCS1B02G009200 , TraesCS1B02G008700 , TraesCS1B02G008700 , TraesCS1B02G009800 , TraesCS1A02G006200 , TraesCS1A02G006300 , TraesCS1D02G001700 , TraesCS1A02G005200 , TraesCS1B02G009000 , TraesCS1B02G009000 , TraesCS1D02G001500 , TraesCS1B02G009800 , TraesCS1D02G002900 , TraesCS1A02G007100 , TraesCS1B02G007100 , TraesCS1B02G008300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
2 Sobic.009G000200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
3 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
4 Sobic.006G149600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@auxin response factor, putative, expressed -
5 Sobic.003G332000 expressed protein -
6 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G025800 amino acid transporter, putative, expressed -
8 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
9 Sobic.009G200300 expressed protein -
10 Sobic.010G093100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
11 Sobic.002G031100 resistance protein LR10, putative, expressed -
12 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
13 Sobic.007G131700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
14 Sobic.004G125900 ethylene-responsive protein related, putative, expressed -
15 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
16 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
17 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
18 Sobic.007G092700 - -
19 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
20 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase


Gene co-expression network
sample Sobic001G273500 Sobic001G273500 Sobic003G316300 Sobic003G316300 Sobic001G273500--Sobic003G316300 Sobic009G000200 Sobic009G000200 Sobic001G273500--Sobic009G000200 Sobic009G079300 Sobic009G079300 Sobic001G273500--Sobic009G079300 Sobic006G149600 Sobic006G149600 Sobic001G273500--Sobic006G149600 Sobic003G332000 Sobic003G332000 Sobic001G273500--Sobic003G332000 Sobic001G298500 Sobic001G298500 Sobic001G273500--Sobic001G298500 Sobic007G025800 Sobic007G025800 Sobic001G273500--Sobic007G025800 Sobic004G162400 Sobic004G162400 Sobic001G273500--Sobic004G162400 Sobic009G200300 Sobic009G200300 Sobic001G273500--Sobic009G200300 Sobic003G316300--Sobic009G000200 Sobic001G386400 Sobic001G386400 Sobic003G316300--Sobic001G386400 Sobic003G316300--Sobic009G079300 Sobic006G119200 Sobic006G119200 Sobic003G316300--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic003G316300--Sobic009G167700 Sobic003G316300--Sobic001G273500 Sobic004G125900 Sobic004G125900 Sobic003G316300--Sobic004G125900 Sobic003G316300--Sobic001G298500 Sobic003G316300--Sobic009G200300 Sobic009G000200--Sobic009G079300 Sobic009G000200--Sobic003G316300 Sobic009G000200--Sobic001G386400 Sobic009G000200--Sobic001G298500 Sobic006G002600 Sobic006G002600 Sobic009G000200--Sobic006G002600 Sobic008G189200 Sobic008G189200 Sobic009G000200--Sobic008G189200 Sobic009G000200--Sobic004G125900 Sobic001G180900 Sobic001G180900 Sobic009G000200--Sobic001G180900 Sobic009G000200--Sobic006G149600 Sobic009G079300--Sobic009G000200 Sobic004G236550 Sobic004G236550 Sobic009G079300--Sobic004G236550 Sobic003G126300 Sobic003G126300 Sobic009G079300--Sobic003G126300 Sobic009G079300--Sobic003G316300 Sobic009G079300--Sobic007G025800 Sobic009G079300--Sobic001G180900 Sobic003G272400 Sobic003G272400 Sobic009G079300--Sobic003G272400 Sobic009G136100 Sobic009G136100 Sobic009G079300--Sobic009G136100 Sobic003G367300 Sobic003G367300 Sobic009G079300--Sobic003G367300 Sobic006G149600--Sobic009G000200 Sobic006G149600--Sobic004G162400 Sobic006G149600--Sobic001G273500 Sobic004G071200 Sobic004G071200 Sobic006G149600--Sobic004G071200 Sobic005G231900 Sobic005G231900 Sobic006G149600--Sobic005G231900 Sobic001G015500 Sobic001G015500 Sobic006G149600--Sobic001G015500 Sobic006G149600--Sobic009G079300 Sobic006G149600--Sobic001G298500 Sobic005G178100 Sobic005G178100 Sobic006G149600--Sobic005G178100 Sobic003G332000--Sobic004G236550 Sobic004G353600 Sobic004G353600 Sobic003G332000--Sobic004G353600 Sobic003G374700 Sobic003G374700 Sobic003G332000--Sobic003G374700 Sobic009G118600 Sobic009G118600 Sobic003G332000--Sobic009G118600 Sobic001G005700 Sobic001G005700 Sobic003G332000--Sobic001G005700 Sobic003G332000--Sobic009G136100 Sobic002G225300 Sobic002G225300 Sobic003G332000--Sobic002G225300 Sobic003G332000--Sobic009G079300 Sobic007G131700 Sobic007G131700 Sobic003G332000--Sobic007G131700 Sobic001G298500--Sobic009G000200 Sobic001G298500--Sobic009G079300 Sobic006G271200 Sobic006G271200 Sobic001G298500--Sobic006G271200 Sobic001G350700 Sobic001G350700 Sobic001G298500--Sobic001G350700 Sobic001G298500--Sobic008G189200 Sobic004G004200 Sobic004G004200 Sobic001G298500--Sobic004G004200 Sobic010G107000 Sobic010G107000 Sobic001G298500--Sobic010G107000 Sobic007G092700 Sobic007G092700 Sobic001G298500--Sobic007G092700 Sobic006G125400 Sobic006G125400 Sobic001G298500--Sobic006G125400 Sobic010G260300 Sobic010G260300 Sobic007G025800--Sobic010G260300 Sobic002G271100 Sobic002G271100 Sobic007G025800--Sobic002G271100 Sobic003G225900 Sobic003G225900 Sobic007G025800--Sobic003G225900 Sobic007G025800--Sobic009G079300 Sobic002G189000 Sobic002G189000 Sobic007G025800--Sobic002G189000 Sobic007G025800--Sobic007G131700 Sobic006G267900 Sobic006G267900 Sobic007G025800--Sobic006G267900 Sobic007G025800--Sobic004G236550 Sobic003G229000 Sobic003G229000 Sobic007G025800--Sobic003G229000 Sobic005G216000 Sobic005G216000 Sobic004G162400--Sobic005G216000 Sobic002G304000 Sobic002G304000 Sobic004G162400--Sobic002G304000 Sobic004G162400--Sobic005G231900 Sobic004G101900 Sobic004G101900 Sobic004G162400--Sobic004G101900 Sobic009G161000 Sobic009G161000 Sobic004G162400--Sobic009G161000 Sobic004G162400--Sobic005G178100 Sobic003G355600 Sobic003G355600 Sobic004G162400--Sobic003G355600 Sobic009G126900 Sobic009G126900 Sobic004G162400--Sobic009G126900 Sobic004G162400--Sobic001G015500 Sobic004G236600 Sobic004G236600 Sobic009G200300--Sobic004G236600 Sobic009G200300--Sobic009G136100 Sobic009G135100 Sobic009G135100 Sobic009G200300--Sobic009G135100 Sobic009G200300--Sobic003G316300 Sobic009G200300--Sobic005G231900 Sobic002G322900 Sobic002G322900 Sobic009G200300--Sobic002G322900 Sobic009G200300--Sobic004G236550 Sobic009G200300--Sobic009G000200 Sobic009G200300--Sobic007G025800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.