Gene annotation
Transcriptome id Sobic.007G092700.1
Synonym
Functional annotation -
UniProt A0A1B6PGL7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G034000 expressed protein -
2 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
3 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
4 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
5 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
8 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
9 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
10 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
11 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
12 Sobic.003G105800 No apical meristem protein, putative, expressed -
13 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
14 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
15 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
16 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
18 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
20 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin


Gene co-expression network
sample Sobic007G092700 Sobic007G092700 Sobic007G034000 Sobic007G034000 Sobic007G092700--Sobic007G034000 Sobic001G015500 Sobic001G015500 Sobic007G092700--Sobic001G015500 Sobic001G069900 Sobic001G069900 Sobic007G092700--Sobic001G069900 Sobic007G186200 Sobic007G186200 Sobic007G092700--Sobic007G186200 Sobic008G189200 Sobic008G189200 Sobic007G092700--Sobic008G189200 Sobic008G079300 Sobic008G079300 Sobic007G092700--Sobic008G079300 Sobic001G207400 Sobic001G207400 Sobic007G092700--Sobic001G207400 Sobic003G428400 Sobic003G428400 Sobic007G092700--Sobic003G428400 Sobic006G181300 Sobic006G181300 Sobic007G092700--Sobic006G181300 Sobic007G034000--Sobic007G092700 Sobic007G034000--Sobic006G181300 Sobic002G210800 Sobic002G210800 Sobic007G034000--Sobic002G210800 Sobic001G359500 Sobic001G359500 Sobic007G034000--Sobic001G359500 Sobic007G034000--Sobic001G069900 Sobic006G082000 Sobic006G082000 Sobic007G034000--Sobic006G082000 Sobic005G221000 Sobic005G221000 Sobic007G034000--Sobic005G221000 Sobic007G034000--Sobic001G015500 Sobic001G504900 Sobic001G504900 Sobic007G034000--Sobic001G504900 Sobic001G015500--Sobic001G069900 Sobic001G325200 Sobic001G325200 Sobic001G015500--Sobic001G325200 Sobic006G091700 Sobic006G091700 Sobic001G015500--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic001G015500--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic001G015500--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic001G015500--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic001G015500--Sobic004G124200 Sobic001G150600 Sobic001G150600 Sobic001G015500--Sobic001G150600 Sobic001G015500--Sobic007G186200 Sobic001G069900--Sobic001G015500 Sobic001G069900--Sobic006G181300 Sobic001G069900--Sobic003G087200 Sobic001G069900--Sobic006G091700 Sobic009G114000 Sobic009G114000 Sobic001G069900--Sobic009G114000 Sobic001G069900--Sobic001G150600 Sobic001G069900--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic001G069900--Sobic009G034700 Sobic001G069900--Sobic001G325200 Sobic007G186200--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic007G186200--Sobic002G304000 Sobic009G226300 Sobic009G226300 Sobic007G186200--Sobic009G226300 Sobic007G186200--Sobic001G015500 Sobic007G068100 Sobic007G068100 Sobic007G186200--Sobic007G068100 Sobic003G355600 Sobic003G355600 Sobic007G186200--Sobic003G355600 Sobic007G186200--Sobic001G150600 Sobic007G186200--Sobic004G101900 Sobic009G054500 Sobic009G054500 Sobic007G186200--Sobic009G054500 Sobic003G244600 Sobic003G244600 Sobic008G189200--Sobic003G244600 Sobic008G190900 Sobic008G190900 Sobic008G189200--Sobic008G190900 Sobic005G217200 Sobic005G217200 Sobic008G189200--Sobic005G217200 Sobic010G043400 Sobic010G043400 Sobic008G189200--Sobic010G043400 Sobic009G126900 Sobic009G126900 Sobic008G189200--Sobic009G126900 Sobic002G274800 Sobic002G274800 Sobic008G189200--Sobic002G274800 Sobic008G189200--Sobic007G092700 Sobic003G105800 Sobic003G105800 Sobic008G189200--Sobic003G105800 Sobic001G150200 Sobic001G150200 Sobic008G189200--Sobic001G150200 Sobic003G184900 Sobic003G184900 Sobic008G079300--Sobic003G184900 Sobic008G079300--Sobic003G105800 Sobic007G225900 Sobic007G225900 Sobic008G079300--Sobic007G225900 Sobic004G321800 Sobic004G321800 Sobic008G079300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic008G079300--Sobic009G207600 Sobic008G079300--Sobic005G178100 Sobic008G079300--Sobic009G034700 Sobic001G474500 Sobic001G474500 Sobic008G079300--Sobic001G474500 Sobic008G079300--Sobic001G325200 Sobic004G355000 Sobic004G355000 Sobic001G207400--Sobic004G355000 Sobic002G430000 Sobic002G430000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic003G428400--Sobic007G068100 Sobic003G428400--Sobic001G474500 Sobic003G428400--Sobic001G325200 Sobic003G428400--Sobic001G015500 Sobic010G205200 Sobic010G205200 Sobic003G428400--Sobic010G205200 Sobic003G428400--Sobic001G069900 Sobic009G057300 Sobic009G057300 Sobic003G428400--Sobic009G057300 Sobic001G438600 Sobic001G438600 Sobic003G428400--Sobic001G438600 Sobic010G112300 Sobic010G112300 Sobic003G428400--Sobic010G112300 Sobic006G181300--Sobic001G069900 Sobic006G181300--Sobic003G087200 Sobic006G181300--Sobic009G114000 Sobic006G181300--Sobic006G091700 Sobic006G181300--Sobic004G321800 Sobic006G181300--Sobic009G207600 Sobic006G181300--Sobic001G015500 Sobic006G181300--Sobic008G079300 Sobic006G181300--Sobic001G150600
Octagon: transcription factors


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