Gene annotation
Transcriptome id Sobic.007G034000.1
Synonym Sb07g002930
Functional annotation expressed protein
UniProt C5YN14
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21310 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os07g36110.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7A02G307500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G092700 - -
2 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
3 Sobic.002G210800 hypothetical protein -
4 Sobic.001G359500 cytochrome P450, putative, expressed -
5 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
6 Sobic.006G082000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSub41 - Putative Subtilisin homologue, expressed -
7 Sobic.005G221000 hypothetical protein -
8 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
9 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
10 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
11 Sobic.001G190300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@loricrin, putative, expressed -
12 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
13 Sobic.002G130000 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
14 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
17 Sobic.003G087200 nuclease PA3, putative, expressed -
18 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
19 Sobic.003G105800 No apical meristem protein, putative, expressed -
20 Sobic.009G203700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA


Gene co-expression network
sample Sobic007G034000 Sobic007G034000 Sobic007G092700 Sobic007G092700 Sobic007G034000--Sobic007G092700 Sobic006G181300 Sobic006G181300 Sobic007G034000--Sobic006G181300 Sobic002G210800 Sobic002G210800 Sobic007G034000--Sobic002G210800 Sobic001G359500 Sobic001G359500 Sobic007G034000--Sobic001G359500 Sobic001G069900 Sobic001G069900 Sobic007G034000--Sobic001G069900 Sobic006G082000 Sobic006G082000 Sobic007G034000--Sobic006G082000 Sobic005G221000 Sobic005G221000 Sobic007G034000--Sobic005G221000 Sobic001G015500 Sobic001G015500 Sobic007G034000--Sobic001G015500 Sobic001G504900 Sobic001G504900 Sobic007G034000--Sobic001G504900 Sobic007G092700--Sobic007G034000 Sobic007G092700--Sobic001G015500 Sobic007G092700--Sobic001G069900 Sobic007G186200 Sobic007G186200 Sobic007G092700--Sobic007G186200 Sobic008G189200 Sobic008G189200 Sobic007G092700--Sobic008G189200 Sobic008G079300 Sobic008G079300 Sobic007G092700--Sobic008G079300 Sobic001G207400 Sobic001G207400 Sobic007G092700--Sobic001G207400 Sobic003G428400 Sobic003G428400 Sobic007G092700--Sobic003G428400 Sobic007G092700--Sobic006G181300 Sobic006G181300--Sobic001G069900 Sobic003G087200 Sobic003G087200 Sobic006G181300--Sobic003G087200 Sobic009G114000 Sobic009G114000 Sobic006G181300--Sobic009G114000 Sobic006G091700 Sobic006G091700 Sobic006G181300--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G181300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic006G181300--Sobic009G207600 Sobic006G181300--Sobic001G015500 Sobic006G181300--Sobic008G079300 Sobic001G150600 Sobic001G150600 Sobic006G181300--Sobic001G150600 Sobic002G210800--Sobic005G221000 Sobic002G210800--Sobic007G034000 Sobic010G212350 Sobic010G212350 Sobic002G210800--Sobic010G212350 Sobic003G315500 Sobic003G315500 Sobic002G210800--Sobic003G315500 Sobic002G210800--Sobic001G069900 Sobic004G162400 Sobic004G162400 Sobic002G210800--Sobic004G162400 Sobic009G120200 Sobic009G120200 Sobic002G210800--Sobic009G120200 Sobic009G161000 Sobic009G161000 Sobic002G210800--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic002G210800--Sobic005G178100 Sobic001G359500--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic001G359500--Sobic002G338100 Sobic001G359500--Sobic001G504900 Sobic001G359500--Sobic009G207600 Sobic001G176600 Sobic001G176600 Sobic001G359500--Sobic001G176600 Sobic009G226600 Sobic009G226600 Sobic001G359500--Sobic009G226600 Sobic001G359500--Sobic007G034000 Sobic008G074400 Sobic008G074400 Sobic001G359500--Sobic008G074400 Sobic010G205200 Sobic010G205200 Sobic001G359500--Sobic010G205200 Sobic001G069900--Sobic001G015500 Sobic001G069900--Sobic006G181300 Sobic001G069900--Sobic003G087200 Sobic001G069900--Sobic006G091700 Sobic001G069900--Sobic009G114000 Sobic001G069900--Sobic001G150600 Sobic001G069900--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic001G069900--Sobic009G034700 Sobic001G325200 Sobic001G325200 Sobic001G069900--Sobic001G325200 Sobic006G082000--Sobic007G034000 Sobic006G082000--Sobic010G212350 Sobic006G082000--Sobic006G181300 Sobic001G190300 Sobic001G190300 Sobic006G082000--Sobic001G190300 Sobic006G082000--Sobic005G221000 Sobic001G316400 Sobic001G316400 Sobic006G082000--Sobic001G316400 Sobic006G082000--Sobic002G210800 Sobic006G082000--Sobic007G092700 Sobic006G082000--Sobic008G074400 Sobic005G221000--Sobic002G210800 Sobic005G221000--Sobic010G212350 Sobic005G221000--Sobic007G034000 Sobic005G221000--Sobic001G069900 Sobic005G221000--Sobic006G181300 Sobic005G221000--Sobic003G315500 Sobic005G221000--Sobic009G120200 Sobic005G221000--Sobic001G316400 Sobic001G150650 Sobic001G150650 Sobic005G221000--Sobic001G150650 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic001G015500--Sobic006G091700 Sobic001G015500--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic001G015500--Sobic004G101900 Sobic001G015500--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic001G015500--Sobic004G124200 Sobic001G015500--Sobic001G150600 Sobic001G015500--Sobic007G186200 Sobic001G504900--Sobic009G207600 Sobic003G398100 Sobic003G398100 Sobic001G504900--Sobic003G398100 Sobic004G261900 Sobic004G261900 Sobic001G504900--Sobic004G261900 Sobic005G149700 Sobic005G149700 Sobic001G504900--Sobic005G149700 Sobic002G266000 Sobic002G266000 Sobic001G504900--Sobic002G266000 Sobic001G504900--Sobic002G338100 Sobic001G504900--Sobic001G069900 Sobic001G504900--Sobic006G181300 Sobic001G504900--Sobic001G015500
Octagon: transcription factors


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