Gene annotation
Transcriptome id Sobic.002G085300.1
Synonym Sb02g007100
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
UniProt C5X1W2
Pfam PF00201
Panther DB PTHR11926:SF252 PTHR11926
NCBI CDD KOG1192; UDP-glucuronosyl and UDP-glucosyl transferase
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0016758transferase activity, transferring hexosyl groups


Orthologs (automatic annotation)
TAIR AT3G55700 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os07g13770.1 : UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013354
Brachypodium KQJ92047 , KQK20282 , KQK20284 , KQK20287
Barley HORVU5Hr1G079670.4 , HORVU5Hr1G079670.1 , HORVU5Hr1G079670.2 , HORVU5Hr1G079670.3
Wheat TraesCS5D02G312000 , TraesCS3D02G514500 , TraesCS4A02G244300 , TraesCS3B02G575000 , TraesCS5B02G305400 , TraesCS3B02G574800 , TraesCS3A02G506700 , TraesCS4B02G070700 , TraesCS7A02G478000 , TraesCS3B02G574900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
2 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
3 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
4 Sobic.003G087200 nuclease PA3, putative, expressed -
5 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
6 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
7 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
8 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
9 Sobic.001G150650 - -
10 Sobic.004G071200 limonoid UDP-glucosyltransferase, putative, expressed -
11 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
12 Sobic.006G030700 receptor kinase, putative, expressed -
13 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
14 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
15 Sobic.003G203200 hypothetical protein -
16 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
18 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
19 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
20 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase


Gene co-expression network
sample Sobic002G085300 Sobic002G085300 Sobic006G091700 Sobic006G091700 Sobic002G085300--Sobic006G091700 Sobic009G114000 Sobic009G114000 Sobic002G085300--Sobic009G114000 Sobic002G420700 Sobic002G420700 Sobic002G085300--Sobic002G420700 Sobic003G087200 Sobic003G087200 Sobic002G085300--Sobic003G087200 Sobic001G015500 Sobic001G015500 Sobic002G085300--Sobic001G015500 Sobic001G150600 Sobic001G150600 Sobic002G085300--Sobic001G150600 Sobic008G153400 Sobic008G153400 Sobic002G085300--Sobic008G153400 Sobic001G069900 Sobic001G069900 Sobic002G085300--Sobic001G069900 Sobic001G150650 Sobic001G150650 Sobic002G085300--Sobic001G150650 Sobic006G091700--Sobic009G114000 Sobic006G091700--Sobic003G087200 Sobic006G091700--Sobic001G150600 Sobic006G091700--Sobic002G085300 Sobic006G091700--Sobic001G015500 Sobic006G091700--Sobic008G153400 Sobic006G030700 Sobic006G030700 Sobic006G091700--Sobic006G030700 Sobic006G199000 Sobic006G199000 Sobic006G091700--Sobic006G199000 Sobic006G091700--Sobic001G069900 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic006G226400 Sobic006G226400 Sobic009G114000--Sobic006G226400 Sobic006G181300 Sobic006G181300 Sobic009G114000--Sobic006G181300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic009G114000--Sobic001G069900 Sobic002G122800 Sobic002G122800 Sobic009G114000--Sobic002G122800 Sobic009G114000--Sobic006G030700 Sobic005G178100 Sobic005G178100 Sobic002G420700--Sobic005G178100 Sobic007G035000 Sobic007G035000 Sobic002G420700--Sobic007G035000 Sobic002G420700--Sobic008G153400 Sobic002G420700--Sobic003G087200 Sobic002G420700--Sobic009G114000 Sobic002G420700--Sobic001G150600 Sobic002G420700--Sobic006G091700 Sobic002G420700--Sobic006G226400 Sobic002G420700--Sobic001G015500 Sobic003G087200--Sobic001G150600 Sobic006G100332 Sobic006G100332 Sobic003G087200--Sobic006G100332 Sobic004G321800 Sobic004G321800 Sobic003G087200--Sobic004G321800 Sobic003G087200--Sobic006G030700 Sobic009G226300 Sobic009G226300 Sobic003G087200--Sobic009G226300 Sobic003G087200--Sobic006G091700 Sobic003G148800 Sobic003G148800 Sobic003G087200--Sobic003G148800 Sobic003G087200--Sobic008G153400 Sobic003G087200--Sobic009G114000 Sobic001G015500--Sobic001G069900 Sobic001G325200 Sobic001G325200 Sobic001G015500--Sobic001G325200 Sobic001G015500--Sobic006G091700 Sobic001G015500--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic001G015500--Sobic004G101900 Sobic001G015500--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic001G015500--Sobic004G124200 Sobic001G015500--Sobic001G150600 Sobic007G186200 Sobic007G186200 Sobic001G015500--Sobic007G186200 Sobic001G150600--Sobic003G087200 Sobic001G150600--Sobic006G100332 Sobic001G150600--Sobic008G153400 Sobic001G150600--Sobic006G030700 Sobic001G150600--Sobic009G226300 Sobic001G150600--Sobic003G148800 Sobic001G150600--Sobic001G325200 Sobic009G054500 Sobic009G054500 Sobic001G150600--Sobic009G054500 Sobic001G150600--Sobic004G321800 Sobic008G153400--Sobic001G150600 Sobic008G153400--Sobic006G199000 Sobic008G153400--Sobic006G030700 Sobic008G153400--Sobic001G325200 Sobic003G398100 Sobic003G398100 Sobic008G153400--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic008G153400--Sobic003G257100 Sobic008G153400--Sobic003G087200 Sobic008G153400--Sobic006G091700 Sobic008G153400--Sobic009G226300 Sobic001G069900--Sobic001G015500 Sobic001G069900--Sobic006G181300 Sobic001G069900--Sobic003G087200 Sobic001G069900--Sobic006G091700 Sobic001G069900--Sobic009G114000 Sobic001G069900--Sobic001G150600 Sobic001G069900--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic001G069900--Sobic009G034700 Sobic001G069900--Sobic001G325200 Sobic001G150650--Sobic001G150600 Sobic004G255000 Sobic004G255000 Sobic001G150650--Sobic004G255000 Sobic001G150650--Sobic003G087200 Sobic001G150650--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic001G150650--Sobic009G029600 Sobic001G150650--Sobic008G153400 Sobic001G150650--Sobic002G085300 Sobic001G162700 Sobic001G162700 Sobic001G150650--Sobic001G162700 Sobic003G259200 Sobic003G259200 Sobic001G150650--Sobic003G259200
Octagon: transcription factors


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