Gene annotation
Transcriptome id Sobic.005G216000.1
Synonym
Functional annotation BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
UniProt A0A1B6PTY0
Pfam -
Panther DB PTHR33479
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g60840.1 : BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
2 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
4 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
5 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
6 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
7 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
8 Sobic.003G105800 No apical meristem protein, putative, expressed -
9 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
10 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
11 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
12 Sobic.003G087200 nuclease PA3, putative, expressed -
13 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
15 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
16 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
18 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
20 Sobic.001G150200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK53b - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic005G216000 Sobic005G216000 Sobic004G162400 Sobic004G162400 Sobic005G216000--Sobic004G162400 Sobic007G035000 Sobic007G035000 Sobic005G216000--Sobic007G035000 Sobic002G420700 Sobic002G420700 Sobic005G216000--Sobic002G420700 Sobic005G215900 Sobic005G215900 Sobic005G216000--Sobic005G215900 Sobic002G304000 Sobic002G304000 Sobic005G216000--Sobic002G304000 Sobic005G231900 Sobic005G231900 Sobic005G216000--Sobic005G231900 Sobic003G244600 Sobic003G244600 Sobic005G216000--Sobic003G244600 Sobic003G105800 Sobic003G105800 Sobic005G216000--Sobic003G105800 Sobic005G178100 Sobic005G178100 Sobic005G216000--Sobic005G178100 Sobic004G162400--Sobic005G216000 Sobic004G162400--Sobic002G304000 Sobic004G162400--Sobic005G231900 Sobic004G101900 Sobic004G101900 Sobic004G162400--Sobic004G101900 Sobic009G161000 Sobic009G161000 Sobic004G162400--Sobic009G161000 Sobic004G162400--Sobic005G178100 Sobic003G355600 Sobic003G355600 Sobic004G162400--Sobic003G355600 Sobic009G126900 Sobic009G126900 Sobic004G162400--Sobic009G126900 Sobic001G015500 Sobic001G015500 Sobic004G162400--Sobic001G015500 Sobic007G035000--Sobic002G420700 Sobic007G035000--Sobic005G216000 Sobic007G035000--Sobic005G178100 Sobic007G035000--Sobic003G105800 Sobic003G087200 Sobic003G087200 Sobic007G035000--Sobic003G087200 Sobic004G071200 Sobic004G071200 Sobic007G035000--Sobic004G071200 Sobic007G035000--Sobic003G244600 Sobic009G114000 Sobic009G114000 Sobic007G035000--Sobic009G114000 Sobic009G034700 Sobic009G034700 Sobic007G035000--Sobic009G034700 Sobic002G420700--Sobic005G178100 Sobic002G420700--Sobic007G035000 Sobic008G153400 Sobic008G153400 Sobic002G420700--Sobic008G153400 Sobic002G420700--Sobic003G087200 Sobic002G420700--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic002G420700--Sobic001G150600 Sobic006G091700 Sobic006G091700 Sobic002G420700--Sobic006G091700 Sobic006G226400 Sobic006G226400 Sobic002G420700--Sobic006G226400 Sobic002G420700--Sobic001G015500 Sobic005G152100 Sobic005G152100 Sobic005G215900--Sobic005G152100 Sobic004G236600 Sobic004G236600 Sobic005G215900--Sobic004G236600 Sobic002G381300 Sobic002G381300 Sobic005G215900--Sobic002G381300 Sobic005G215900--Sobic005G216000 Sobic001G488500 Sobic001G488500 Sobic005G215900--Sobic001G488500 Sobic008G024400 Sobic008G024400 Sobic005G215900--Sobic008G024400 Sobic005G215900--Sobic002G304000 Sobic003G149200 Sobic003G149200 Sobic005G215900--Sobic003G149200 Sobic001G249300 Sobic001G249300 Sobic005G215900--Sobic001G249300 Sobic009G226300 Sobic009G226300 Sobic002G304000--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic002G304000--Sobic009G054500 Sobic002G304000--Sobic004G101900 Sobic003G148800 Sobic003G148800 Sobic002G304000--Sobic003G148800 Sobic002G215700 Sobic002G215700 Sobic002G304000--Sobic002G215700 Sobic008G062200 Sobic008G062200 Sobic002G304000--Sobic008G062200 Sobic001G325200 Sobic001G325200 Sobic002G304000--Sobic001G325200 Sobic002G304000--Sobic003G355600 Sobic002G304000--Sobic003G105800 Sobic005G231900--Sobic004G162400 Sobic005G231900--Sobic001G488500 Sobic005G079900 Sobic005G079900 Sobic005G231900--Sobic005G079900 Sobic005G231900--Sobic004G101900 Sobic005G231900--Sobic005G216000 Sobic005G231900--Sobic004G236600 Sobic005G231900--Sobic002G304000 Sobic002G322900 Sobic002G322900 Sobic005G231900--Sobic002G322900 Sobic006G271200 Sobic006G271200 Sobic005G231900--Sobic006G271200 Sobic008G189200 Sobic008G189200 Sobic003G244600--Sobic008G189200 Sobic006G030700 Sobic006G030700 Sobic003G244600--Sobic006G030700 Sobic003G244600--Sobic002G304000 Sobic003G244600--Sobic006G091700 Sobic003G244600--Sobic003G105800 Sobic003G244600--Sobic005G216000 Sobic007G186200 Sobic007G186200 Sobic003G244600--Sobic007G186200 Sobic003G244600--Sobic001G015500 Sobic003G244600--Sobic009G226300 Sobic003G184900 Sobic003G184900 Sobic003G105800--Sobic003G184900 Sobic008G079300 Sobic008G079300 Sobic003G105800--Sobic008G079300 Sobic004G321800 Sobic004G321800 Sobic003G105800--Sobic004G321800 Sobic003G105800--Sobic001G325200 Sobic003G105800--Sobic002G304000 Sobic007G225900 Sobic007G225900 Sobic003G105800--Sobic007G225900 Sobic006G100332 Sobic006G100332 Sobic003G105800--Sobic006G100332 Sobic003G105800--Sobic003G087200 Sobic003G105800--Sobic009G226300 Sobic005G178100--Sobic009G161000 Sobic001G305800 Sobic001G305800 Sobic005G178100--Sobic001G305800 Sobic005G178100--Sobic003G087200 Sobic005G178100--Sobic002G420700 Sobic005G178100--Sobic001G015500 Sobic005G178100--Sobic003G105800 Sobic005G178100--Sobic009G034700 Sobic005G178100--Sobic003G184900 Sobic005G178100--Sobic001G150600
Octagon: transcription factors


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