Gene annotation
Transcriptome id Sobic.003G252300.2,Sobic.003G252300.1
Synonym
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt A0A1B6Q593
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT1G68300 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os01g32780.1 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G252300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G274800 "senescence-inducible chloroplast stay-green protein, GenBank annotation:AY850140"(PubMedID : 17513504)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@senescence-inducible chloroplast stay-green protein 1, putative, expressed -
2 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
3 Sobic.003G105800 No apical meristem protein, putative, expressed -
4 Sobic.006G115300 amino acid transporter, putative, expressed -
5 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
6 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
7 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.001G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
12 Sobic.006G086100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
13 Sobic.001G271500 expressed protein -
14 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
15 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
16 Sobic.001G150200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK53b - OsWAK receptor-like protein kinase, expressed -
17 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.002G249200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin efflux carrier component, putative, expressed -
20 Sobic.007G092700 - -


Gene co-expression network
sample Sobic003G252300 Sobic003G252300 Sobic002G274800 Sobic002G274800 Sobic003G252300--Sobic002G274800 Sobic005G216000 Sobic005G216000 Sobic003G252300--Sobic005G216000 Sobic003G105800 Sobic003G105800 Sobic003G252300--Sobic003G105800 Sobic006G115300 Sobic006G115300 Sobic003G252300--Sobic006G115300 Sobic008G190900 Sobic008G190900 Sobic003G252300--Sobic008G190900 Sobic004G162400 Sobic004G162400 Sobic003G252300--Sobic004G162400 Sobic008G189200 Sobic008G189200 Sobic003G252300--Sobic008G189200 Sobic007G225900 Sobic007G225900 Sobic003G252300--Sobic007G225900 Sobic001G092000 Sobic001G092000 Sobic003G252300--Sobic001G092000 Sobic010G043400 Sobic010G043400 Sobic002G274800--Sobic010G043400 Sobic002G274800--Sobic007G225900 Sobic002G274800--Sobic003G252300 Sobic002G274800--Sobic003G105800 Sobic002G249200 Sobic002G249200 Sobic002G274800--Sobic002G249200 Sobic002G274800--Sobic008G189200 Sobic009G161000 Sobic009G161000 Sobic002G274800--Sobic009G161000 Sobic004G124200 Sobic004G124200 Sobic002G274800--Sobic004G124200 Sobic001G282600 Sobic001G282600 Sobic002G274800--Sobic001G282600 Sobic005G216000--Sobic004G162400 Sobic007G035000 Sobic007G035000 Sobic005G216000--Sobic007G035000 Sobic002G420700 Sobic002G420700 Sobic005G216000--Sobic002G420700 Sobic005G215900 Sobic005G215900 Sobic005G216000--Sobic005G215900 Sobic002G304000 Sobic002G304000 Sobic005G216000--Sobic002G304000 Sobic005G231900 Sobic005G231900 Sobic005G216000--Sobic005G231900 Sobic003G244600 Sobic003G244600 Sobic005G216000--Sobic003G244600 Sobic005G216000--Sobic003G105800 Sobic005G178100 Sobic005G178100 Sobic005G216000--Sobic005G178100 Sobic003G184900 Sobic003G184900 Sobic003G105800--Sobic003G184900 Sobic008G079300 Sobic008G079300 Sobic003G105800--Sobic008G079300 Sobic004G321800 Sobic004G321800 Sobic003G105800--Sobic004G321800 Sobic001G325200 Sobic001G325200 Sobic003G105800--Sobic001G325200 Sobic003G105800--Sobic002G304000 Sobic003G105800--Sobic007G225900 Sobic006G100332 Sobic006G100332 Sobic003G105800--Sobic006G100332 Sobic003G087200 Sobic003G087200 Sobic003G105800--Sobic003G087200 Sobic009G226300 Sobic009G226300 Sobic003G105800--Sobic009G226300 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic007G131700 Sobic007G131700 Sobic006G115300--Sobic007G131700 Sobic003G252400 Sobic003G252400 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic006G115300--Sobic003G252300 Sobic004G236550 Sobic004G236550 Sobic006G115300--Sobic004G236550 Sobic003G272400 Sobic003G272400 Sobic006G115300--Sobic003G272400 Sobic001G521500 Sobic001G521500 Sobic006G115300--Sobic001G521500 Sobic003G126300 Sobic003G126300 Sobic006G115300--Sobic003G126300 Sobic008G190900--Sobic008G189200 Sobic008G190900--Sobic003G105800 Sobic008G190900--Sobic003G252300 Sobic008G190900--Sobic002G274800 Sobic006G086100 Sobic006G086100 Sobic008G190900--Sobic006G086100 Sobic008G190900--Sobic004G162400 Sobic002G172900 Sobic002G172900 Sobic008G190900--Sobic002G172900 Sobic009G126900 Sobic009G126900 Sobic008G190900--Sobic009G126900 Sobic008G190900--Sobic007G225900 Sobic004G162400--Sobic005G216000 Sobic004G162400--Sobic002G304000 Sobic004G162400--Sobic005G231900 Sobic004G101900 Sobic004G101900 Sobic004G162400--Sobic004G101900 Sobic004G162400--Sobic009G161000 Sobic004G162400--Sobic005G178100 Sobic003G355600 Sobic003G355600 Sobic004G162400--Sobic003G355600 Sobic004G162400--Sobic009G126900 Sobic001G015500 Sobic001G015500 Sobic004G162400--Sobic001G015500 Sobic008G189200--Sobic003G244600 Sobic008G189200--Sobic008G190900 Sobic005G217200 Sobic005G217200 Sobic008G189200--Sobic005G217200 Sobic008G189200--Sobic010G043400 Sobic008G189200--Sobic009G126900 Sobic008G189200--Sobic002G274800 Sobic007G092700 Sobic007G092700 Sobic008G189200--Sobic007G092700 Sobic008G189200--Sobic003G105800 Sobic001G150200 Sobic001G150200 Sobic008G189200--Sobic001G150200 Sobic007G225900--Sobic003G105800 Sobic007G225900--Sobic003G184900 Sobic007G225900--Sobic008G079300 Sobic007G225900--Sobic005G178100 Sobic007G225900--Sobic009G161000 Sobic007G225900--Sobic002G274800 Sobic004G320600 Sobic004G320600 Sobic007G225900--Sobic004G320600 Sobic009G034700 Sobic009G034700 Sobic007G225900--Sobic009G034700 Sobic007G225900--Sobic003G087200 Sobic001G092000--Sobic002G274800 Sobic001G409300 Sobic001G409300 Sobic001G092000--Sobic001G409300 Sobic001G092000--Sobic003G252300 Sobic001G092000--Sobic001G235500 Sobic006G146100 Sobic006G146100 Sobic001G092000--Sobic006G146100 Sobic006G125400 Sobic006G125400 Sobic001G092000--Sobic006G125400 Sobic003G281900 Sobic003G281900 Sobic001G092000--Sobic003G281900 Sobic001G217400 Sobic001G217400 Sobic001G092000--Sobic001G217400 Sobic003G269800 Sobic003G269800 Sobic001G092000--Sobic003G269800
Octagon: transcription factors


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