Gene annotation
Transcriptome id Sobic.001G271500.3,Sobic.001G271500.2,Sobic.001G271500.1
Synonym Sb01g026660
Functional annotation expressed protein
UniProt A0A1Z5S7U4 , A0A1Z5S831 , A0A1Z5S7S4
Pfam -
Panther DB PTHR23155 PTHR23155:SF509
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g04540.1 : expressed protein
MaizeGDB (Corn) Zm00025a017989
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G271500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G352700 VQ domain containing protein, putative, expressed -
2 Sobic.007G131700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.006G115300 amino acid transporter, putative, expressed -
4 Sobic.003G137900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
6 Sobic.009G097300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.004G236550 - -
8 Sobic.004G219700 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.006G086100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
10 Sobic.003G252400 drought induced 19 protein, putative, expressed -
11 Sobic.009G118600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
12 Sobic.003G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
13 Sobic.010G124800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase 7, putative, expressed -
14 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
16 Sobic.009G236300 lectin-like receptor kinase, putative, expressed -
17 Sobic.002G331450 - -
18 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
19 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
20 Sobic.010G245900 - -


Gene co-expression network
sample Sobic001G271500 Sobic001G271500 Sobic001G352700 Sobic001G352700 Sobic001G271500--Sobic001G352700 Sobic007G131700 Sobic007G131700 Sobic001G271500--Sobic007G131700 Sobic006G115300 Sobic006G115300 Sobic001G271500--Sobic006G115300 Sobic003G137900 Sobic003G137900 Sobic001G271500--Sobic003G137900 Sobic003G252300 Sobic003G252300 Sobic001G271500--Sobic003G252300 Sobic009G097300 Sobic009G097300 Sobic001G271500--Sobic009G097300 Sobic004G236550 Sobic004G236550 Sobic001G271500--Sobic004G236550 Sobic004G219700 Sobic004G219700 Sobic001G271500--Sobic004G219700 Sobic006G086100 Sobic006G086100 Sobic001G271500--Sobic006G086100 Sobic001G352700--Sobic001G271500 Sobic001G352700--Sobic007G131700 Sobic001G352700--Sobic003G252300 Sobic001G352700--Sobic006G115300 Sobic008G190900 Sobic008G190900 Sobic001G352700--Sobic008G190900 Sobic001G352700--Sobic004G236550 Sobic009G136100 Sobic009G136100 Sobic001G352700--Sobic009G136100 Sobic002G055400 Sobic002G055400 Sobic001G352700--Sobic002G055400 Sobic003G252400 Sobic003G252400 Sobic001G352700--Sobic003G252400 Sobic007G131700--Sobic003G252400 Sobic007G131700--Sobic006G115300 Sobic002G110200 Sobic002G110200 Sobic007G131700--Sobic002G110200 Sobic003G229000 Sobic003G229000 Sobic007G131700--Sobic003G229000 Sobic002G189000 Sobic002G189000 Sobic007G131700--Sobic002G189000 Sobic007G025800 Sobic007G025800 Sobic007G131700--Sobic007G025800 Sobic010G260300 Sobic010G260300 Sobic007G131700--Sobic010G260300 Sobic002G013900 Sobic002G013900 Sobic007G131700--Sobic002G013900 Sobic002G331450 Sobic002G331450 Sobic007G131700--Sobic002G331450 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic006G115300--Sobic007G131700 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic006G115300--Sobic003G252300 Sobic006G115300--Sobic004G236550 Sobic003G272400 Sobic003G272400 Sobic006G115300--Sobic003G272400 Sobic001G521500 Sobic001G521500 Sobic006G115300--Sobic001G521500 Sobic003G126300 Sobic003G126300 Sobic006G115300--Sobic003G126300 Sobic003G397400 Sobic003G397400 Sobic003G137900--Sobic003G397400 Sobic007G073750 Sobic007G073750 Sobic003G137900--Sobic007G073750 Sobic005G016900 Sobic005G016900 Sobic003G137900--Sobic005G016900 Sobic003G137900--Sobic009G097300 Sobic008G052500 Sobic008G052500 Sobic003G137900--Sobic008G052500 Sobic002G325600 Sobic002G325600 Sobic003G137900--Sobic002G325600 Sobic007G143100 Sobic007G143100 Sobic003G137900--Sobic007G143100 Sobic007G143200 Sobic007G143200 Sobic003G137900--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic003G137900--Sobic009G076700 Sobic002G274800 Sobic002G274800 Sobic003G252300--Sobic002G274800 Sobic005G216000 Sobic005G216000 Sobic003G252300--Sobic005G216000 Sobic003G105800 Sobic003G105800 Sobic003G252300--Sobic003G105800 Sobic003G252300--Sobic006G115300 Sobic003G252300--Sobic008G190900 Sobic004G162400 Sobic004G162400 Sobic003G252300--Sobic004G162400 Sobic008G189200 Sobic008G189200 Sobic003G252300--Sobic008G189200 Sobic007G225900 Sobic007G225900 Sobic003G252300--Sobic007G225900 Sobic001G092000 Sobic001G092000 Sobic003G252300--Sobic001G092000 Sobic009G097300--Sobic003G137900 Sobic005G215766 Sobic005G215766 Sobic009G097300--Sobic005G215766 Sobic009G097300--Sobic003G397400 Sobic006G272700 Sobic006G272700 Sobic009G097300--Sobic006G272700 Sobic003G281900 Sobic003G281900 Sobic009G097300--Sobic003G281900 Sobic003G064300 Sobic003G064300 Sobic009G097300--Sobic003G064300 Sobic009G097300--Sobic009G076700 Sobic009G097300--Sobic007G073750 Sobic009G097300--Sobic007G143200 Sobic009G079300 Sobic009G079300 Sobic004G236550--Sobic009G079300 Sobic002G355200 Sobic002G355200 Sobic004G236550--Sobic002G355200 Sobic004G236550--Sobic009G136100 Sobic003G332000 Sobic003G332000 Sobic004G236550--Sobic003G332000 Sobic004G236550--Sobic006G086100 Sobic005G016800 Sobic005G016800 Sobic004G236550--Sobic005G016800 Sobic004G236550--Sobic009G118600 Sobic004G236550--Sobic006G115300 Sobic002G225300 Sobic002G225300 Sobic004G236550--Sobic002G225300 Sobic010G245900 Sobic010G245900 Sobic004G219700--Sobic010G245900 Sobic004G219700--Sobic003G397400 Sobic004G219700--Sobic007G073750 Sobic004G219700--Sobic003G137900 Sobic004G219700--Sobic006G272700 Sobic010G253500 Sobic010G253500 Sobic004G219700--Sobic010G253500 Sobic001G210250 Sobic001G210250 Sobic004G219700--Sobic001G210250 Sobic003G083000 Sobic003G083000 Sobic004G219700--Sobic003G083000 Sobic004G219700--Sobic005G016900 Sobic003G000600 Sobic003G000600 Sobic006G086100--Sobic003G000600 Sobic006G086100--Sobic004G236550 Sobic006G086100--Sobic009G118600 Sobic008G144500 Sobic008G144500 Sobic006G086100--Sobic008G144500 Sobic006G086100--Sobic008G190900 Sobic006G086100--Sobic001G235500 Sobic006G086100--Sobic006G115300 Sobic006G086100--Sobic003G281900 Sobic009G236300 Sobic009G236300 Sobic006G086100--Sobic009G236300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.