Gene annotation
Transcriptome id Sobic.007G131700.2,Sobic.007G131700.1
Synonym Sb07g020750, CVP2
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt C5YL19
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF147
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05470 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os09g23140.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ98328
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G131700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G252400 drought induced 19 protein, putative, expressed -
2 Sobic.006G115300 amino acid transporter, putative, expressed -
3 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.003G229000 cytochrome P450 72A1, putative, expressed -
5 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
6 Sobic.007G025800 amino acid transporter, putative, expressed -
7 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
9 Sobic.002G331450 - -
10 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
11 Sobic.002G271100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
12 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
13 Sobic.001G005700 acyl carrier protein, putative, expressed -
14 Sobic.009G128300 CUE domain containing protein, expressed -
15 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
16 Sobic.004G211301 - -
17 Sobic.006G258800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
18 Sobic.001G037150 - -
19 Sobic.003G397500 expressed protein -
20 Sobic.002G225300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CPuORF39 - conserved peptide uORF-containing transcript, expressed K09419: heat shock transcription factor, other eukaryote


Gene co-expression network
sample Sobic007G131700 Sobic007G131700 Sobic003G252400 Sobic003G252400 Sobic007G131700--Sobic003G252400 Sobic006G115300 Sobic006G115300 Sobic007G131700--Sobic006G115300 Sobic002G110200 Sobic002G110200 Sobic007G131700--Sobic002G110200 Sobic003G229000 Sobic003G229000 Sobic007G131700--Sobic003G229000 Sobic002G189000 Sobic002G189000 Sobic007G131700--Sobic002G189000 Sobic007G025800 Sobic007G025800 Sobic007G131700--Sobic007G025800 Sobic010G260300 Sobic010G260300 Sobic007G131700--Sobic010G260300 Sobic002G013900 Sobic002G013900 Sobic007G131700--Sobic002G013900 Sobic002G331450 Sobic002G331450 Sobic007G131700--Sobic002G331450 Sobic003G252400--Sobic002G331450 Sobic004G211301 Sobic004G211301 Sobic003G252400--Sobic004G211301 Sobic003G397500 Sobic003G397500 Sobic003G252400--Sobic003G397500 Sobic003G252400--Sobic002G110200 Sobic010G085400 Sobic010G085400 Sobic003G252400--Sobic010G085400 Sobic005G060600 Sobic005G060600 Sobic003G252400--Sobic005G060600 Sobic003G252400--Sobic002G013900 Sobic002G325600 Sobic002G325600 Sobic003G252400--Sobic002G325600 Sobic003G252400--Sobic007G131700 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic006G115300--Sobic007G131700 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic003G252300 Sobic003G252300 Sobic006G115300--Sobic003G252300 Sobic004G236550 Sobic004G236550 Sobic006G115300--Sobic004G236550 Sobic003G272400 Sobic003G272400 Sobic006G115300--Sobic003G272400 Sobic001G521500 Sobic001G521500 Sobic006G115300--Sobic001G521500 Sobic003G126300 Sobic003G126300 Sobic006G115300--Sobic003G126300 Sobic002G110200--Sobic002G331450 Sobic001G075101 Sobic001G075101 Sobic002G110200--Sobic001G075101 Sobic006G203000 Sobic006G203000 Sobic002G110200--Sobic006G203000 Sobic007G169600 Sobic007G169600 Sobic002G110200--Sobic007G169600 Sobic009G128300 Sobic009G128300 Sobic002G110200--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic002G110200--Sobic002G182800 Sobic002G110200--Sobic002G013900 Sobic001G509400 Sobic001G509400 Sobic002G110200--Sobic001G509400 Sobic004G170032 Sobic004G170032 Sobic002G110200--Sobic004G170032 Sobic003G229000--Sobic010G260300 Sobic003G229000--Sobic002G189000 Sobic003G229000--Sobic003G252400 Sobic003G229000--Sobic002G110200 Sobic003G229000--Sobic007G131700 Sobic003G229000--Sobic002G013900 Sobic003G291600 Sobic003G291600 Sobic003G229000--Sobic003G291600 Sobic005G209500 Sobic005G209500 Sobic003G229000--Sobic005G209500 Sobic003G229000--Sobic009G128300 Sobic002G189000--Sobic002G013900 Sobic003G233900 Sobic003G233900 Sobic002G189000--Sobic003G233900 Sobic002G271100 Sobic002G271100 Sobic002G189000--Sobic002G271100 Sobic002G189000--Sobic010G260300 Sobic002G189000--Sobic009G128300 Sobic002G189000--Sobic002G110200 Sobic003G225900 Sobic003G225900 Sobic002G189000--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic002G189000--Sobic004G155150 Sobic004G285100 Sobic004G285100 Sobic002G189000--Sobic004G285100 Sobic007G025800--Sobic010G260300 Sobic007G025800--Sobic002G271100 Sobic007G025800--Sobic003G225900 Sobic009G079300 Sobic009G079300 Sobic007G025800--Sobic009G079300 Sobic007G025800--Sobic002G189000 Sobic007G025800--Sobic007G131700 Sobic006G267900 Sobic006G267900 Sobic007G025800--Sobic006G267900 Sobic007G025800--Sobic004G236550 Sobic007G025800--Sobic003G229000 Sobic010G260300--Sobic002G189000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic010G260300--Sobic007G025800 Sobic010G260300--Sobic002G271100 Sobic010G260300--Sobic003G225900 Sobic010G260300--Sobic004G155150 Sobic010G260300--Sobic003G233900 Sobic003G198150 Sobic003G198150 Sobic010G260300--Sobic003G198150 Sobic002G013900--Sobic003G233900 Sobic002G013900--Sobic009G128300 Sobic002G013900--Sobic002G110200 Sobic002G013900--Sobic002G189000 Sobic002G013900--Sobic002G182800 Sobic002G013900--Sobic002G331450 Sobic003G227600 Sobic003G227600 Sobic002G013900--Sobic003G227600 Sobic002G013900--Sobic010G085400 Sobic003G040800 Sobic003G040800 Sobic002G013900--Sobic003G040800 Sobic002G331450--Sobic007G169600 Sobic002G331450--Sobic001G075101 Sobic002G331450--Sobic002G325600 Sobic003G083000 Sobic003G083000 Sobic002G331450--Sobic003G083000 Sobic002G331450--Sobic002G110200 Sobic002G331450--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic002G331450--Sobic002G037400 Sobic002G331450--Sobic009G128300 Sobic002G331450--Sobic002G182800
Octagon: transcription factors


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