Gene annotation
Transcriptome id Sobic.002G225300.1
Synonym AT-HSFB1, HSFB1, HSF4, ATHSF4, Sb02g026590
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
CPuORF39 - conserved peptide uORF-containing transcript, expressed
UniProt C5X2A9
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF166
NCBI CDD -
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G36990 : heat shock factor 4
RAP-DB (Rice) LOC_Os09g28354.1 : CPuORF39 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a014059 , Zm00025a047248
Brachypodium KQJ99265 , KQJ90514
Barley HORVU5Hr1G068320.4 , HORVU5Hr1G068320.1 , HORVU5Hr1G068320.2 , HORVU5Hr1G068320.3
Wheat TraesCS5A02G237900 , TraesCS5B02G236400 , TraesCS5D02G244800
Populus -


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cDNA sequences
Sobic.002G225300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G236550 - -
2 Sobic.004G155200 expressed protein -
3 Sobic.001G005700 acyl carrier protein, putative, expressed -
4 Sobic.003G289900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ENTH domain containing protein, expressed K12471: epsin
5 Sobic.007G025800 amino acid transporter, putative, expressed -
6 Sobic.007G131700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.001G037150 - -
8 Sobic.003G225900 expressed protein -
9 Sobic.003G332000 expressed protein -
10 Sobic.003G197300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AR791, putative, expressed -
11 Sobic.001G403600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
12 Sobic.002G185300 transporter, putative, expressed -
13 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
14 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G502700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
16 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
17 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
19 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
20 Sobic.003G291600 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G225300 Sobic002G225300 Sobic004G236550 Sobic004G236550 Sobic002G225300--Sobic004G236550 Sobic004G155200 Sobic004G155200 Sobic002G225300--Sobic004G155200 Sobic001G005700 Sobic001G005700 Sobic002G225300--Sobic001G005700 Sobic003G289900 Sobic003G289900 Sobic002G225300--Sobic003G289900 Sobic007G025800 Sobic007G025800 Sobic002G225300--Sobic007G025800 Sobic007G131700 Sobic007G131700 Sobic002G225300--Sobic007G131700 Sobic001G037150 Sobic001G037150 Sobic002G225300--Sobic001G037150 Sobic003G225900 Sobic003G225900 Sobic002G225300--Sobic003G225900 Sobic003G332000 Sobic003G332000 Sobic002G225300--Sobic003G332000 Sobic009G079300 Sobic009G079300 Sobic004G236550--Sobic009G079300 Sobic002G355200 Sobic002G355200 Sobic004G236550--Sobic002G355200 Sobic009G136100 Sobic009G136100 Sobic004G236550--Sobic009G136100 Sobic004G236550--Sobic003G332000 Sobic006G086100 Sobic006G086100 Sobic004G236550--Sobic006G086100 Sobic005G016800 Sobic005G016800 Sobic004G236550--Sobic005G016800 Sobic009G118600 Sobic009G118600 Sobic004G236550--Sobic009G118600 Sobic006G115300 Sobic006G115300 Sobic004G236550--Sobic006G115300 Sobic004G236550--Sobic002G225300 Sobic001G502700 Sobic001G502700 Sobic004G155200--Sobic001G502700 Sobic001G286000 Sobic001G286000 Sobic004G155200--Sobic001G286000 Sobic004G155200--Sobic002G225300 Sobic002G185300 Sobic002G185300 Sobic004G155200--Sobic002G185300 Sobic008G092400 Sobic008G092400 Sobic004G155200--Sobic008G092400 Sobic004G155200--Sobic001G037150 Sobic004G155150 Sobic004G155150 Sobic004G155200--Sobic004G155150 Sobic004G155200--Sobic001G005700 Sobic006G267900 Sobic006G267900 Sobic004G155200--Sobic006G267900 Sobic004G211301 Sobic004G211301 Sobic001G005700--Sobic004G211301 Sobic002G189000 Sobic002G189000 Sobic001G005700--Sobic002G189000 Sobic010G085400 Sobic010G085400 Sobic001G005700--Sobic010G085400 Sobic009G128300 Sobic009G128300 Sobic001G005700--Sobic009G128300 Sobic002G013900 Sobic002G013900 Sobic001G005700--Sobic002G013900 Sobic003G227600 Sobic003G227600 Sobic001G005700--Sobic003G227600 Sobic009G216900 Sobic009G216900 Sobic001G005700--Sobic009G216900 Sobic003G233900 Sobic003G233900 Sobic001G005700--Sobic003G233900 Sobic001G005700--Sobic003G225900 Sobic003G289900--Sobic002G225300 Sobic009G153000 Sobic009G153000 Sobic003G289900--Sobic009G153000 Sobic003G033000 Sobic003G033000 Sobic003G289900--Sobic003G033000 Sobic004G353600 Sobic004G353600 Sobic003G289900--Sobic004G353600 Sobic009G179600 Sobic009G179600 Sobic003G289900--Sobic009G179600 Sobic003G289900--Sobic003G332000 Sobic003G289900--Sobic009G118600 Sobic003G197300 Sobic003G197300 Sobic003G289900--Sobic003G197300 Sobic004G039300 Sobic004G039300 Sobic003G289900--Sobic004G039300 Sobic010G260300 Sobic010G260300 Sobic007G025800--Sobic010G260300 Sobic002G271100 Sobic002G271100 Sobic007G025800--Sobic002G271100 Sobic007G025800--Sobic003G225900 Sobic007G025800--Sobic009G079300 Sobic007G025800--Sobic002G189000 Sobic007G025800--Sobic007G131700 Sobic007G025800--Sobic006G267900 Sobic007G025800--Sobic004G236550 Sobic003G229000 Sobic003G229000 Sobic007G025800--Sobic003G229000 Sobic003G252400 Sobic003G252400 Sobic007G131700--Sobic003G252400 Sobic007G131700--Sobic006G115300 Sobic002G110200 Sobic002G110200 Sobic007G131700--Sobic002G110200 Sobic007G131700--Sobic003G229000 Sobic007G131700--Sobic002G189000 Sobic007G131700--Sobic007G025800 Sobic007G131700--Sobic010G260300 Sobic007G131700--Sobic002G013900 Sobic002G331450 Sobic002G331450 Sobic007G131700--Sobic002G331450 Sobic001G095500 Sobic001G095500 Sobic001G037150--Sobic001G095500 Sobic001G037150--Sobic010G260300 Sobic001G037150--Sobic007G131700 Sobic001G037150--Sobic003G252400 Sobic001G037150--Sobic002G225300 Sobic002G229600 Sobic002G229600 Sobic001G037150--Sobic002G229600 Sobic001G037150--Sobic004G155200 Sobic001G037150--Sobic001G005700 Sobic001G112000 Sobic001G112000 Sobic001G037150--Sobic001G112000 Sobic003G225900--Sobic006G267900 Sobic003G225900--Sobic002G189000 Sobic003G225900--Sobic002G271100 Sobic002G427400 Sobic002G427400 Sobic003G225900--Sobic002G427400 Sobic003G373150 Sobic003G373150 Sobic003G225900--Sobic003G373150 Sobic001G081600 Sobic001G081600 Sobic003G225900--Sobic001G081600 Sobic003G225900--Sobic010G260300 Sobic005G087800 Sobic005G087800 Sobic003G225900--Sobic005G087800 Sobic004G283201 Sobic004G283201 Sobic003G225900--Sobic004G283201 Sobic003G332000--Sobic004G236550 Sobic003G332000--Sobic004G353600 Sobic003G374700 Sobic003G374700 Sobic003G332000--Sobic003G374700 Sobic003G332000--Sobic009G118600 Sobic003G332000--Sobic001G005700 Sobic003G332000--Sobic009G136100 Sobic003G332000--Sobic002G225300 Sobic003G332000--Sobic009G079300 Sobic003G332000--Sobic007G131700
Octagon: transcription factors


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