Gene annotation
Transcriptome id Sobic.004G353600.1
Synonym Sb04g038030, ATSUC3, SbSUT2;SUT2;SbSUT4, SUT2, ATSUT2, SUC3
Functional annotation sucrose transporters (PubMedID : 23805151)
Sucrose transporter genes (PubMedID : 24456189)
Sugar transporter (PubMedID : 27330561)
transporter, major facilitator family, putative, expressed
UniProt A0A1P8SGQ8 , C5XWM9
Pfam PF13347
Panther DB PTHR19432 PTHR19432:SF27
NCBI CDD KOG0637; Sucrose transporter and related proteins
KEGG Orthology K15378; solute carrier family 45, member 1/2/4
Gene Ontology GO:0015770; sucrose transport GO:0008515sucrose transmembrane transporter activity GO:0005887integral component of plasma membrane


Orthologs (automatic annotation)
TAIR AT2G02860 : sucrose transporter 2
RAP-DB (Rice) LOC_Os02g58080.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a022659
Brachypodium KQK01567 , KQK01566 , KQK01568
Barley HORVU5Hr1G045190.1 , HORVU6Hr1G093600.10 , HORVU6Hr1G093600.11 , HORVU6Hr1G093600.12 , HORVU6Hr1G093600.13 , HORVU6Hr1G093600.14 , HORVU6Hr1G093600.15 , HORVU6Hr1G093600.16 , HORVU6Hr1G093600.17 , HORVU6Hr1G093600.8 , HORVU6Hr1G093600.9 , HORVU6Hr1G093600.2 , HORVU6Hr1G093600.3 , HORVU6Hr1G093600.1 , HORVU6Hr1G093600.6 , HORVU6Hr1G093600.7 , HORVU6Hr1G093600.4 , HORVU6Hr1G093600.5
Wheat TraesCS6D02G393600 , TraesCS6A02G410700 , TraesCS6A02G410700 , TraesCS6B02G456500 , TraesCS6B02G456500 , TraesCS6B02G456500 , TraesCS6B02G456500
Populus -


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cDNA sequences
Sobic.004G353600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G272400 DUF292 domain containing protein, expressed -
2 Sobic.002G306000 calmodulin-binding transcription activator 5, putative, expressed -
3 Sobic.006G078300 - -
4 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G378000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/LRR-repeat protein 2, putative, expressed K03875: SKP2, F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
6 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
7 Sobic.003G332000 expressed protein -
8 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
9 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
10 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
11 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
12 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
13 Sobic.002G331450 - -
14 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
15 Sobic.009G128300 CUE domain containing protein, expressed -
16 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
17 Sobic.004G211301 - -
18 Sobic.007G196900 expressed protein -
19 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
20 Sobic.003G144200 Homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic004G353600 Sobic004G353600 Sobic003G272400 Sobic003G272400 Sobic004G353600--Sobic003G272400 Sobic002G306000 Sobic002G306000 Sobic004G353600--Sobic002G306000 Sobic006G078300 Sobic006G078300 Sobic004G353600--Sobic006G078300 Sobic003G087100 Sobic003G087100 Sobic004G353600--Sobic003G087100 Sobic003G378000 Sobic003G378000 Sobic004G353600--Sobic003G378000 Sobic001G157400 Sobic001G157400 Sobic004G353600--Sobic001G157400 Sobic003G332000 Sobic003G332000 Sobic004G353600--Sobic003G332000 Sobic001G075800 Sobic001G075800 Sobic004G353600--Sobic001G075800 Sobic006G203000 Sobic006G203000 Sobic004G353600--Sobic006G203000 Sobic003G272400--Sobic004G353600 Sobic003G281900 Sobic003G281900 Sobic003G272400--Sobic003G281900 Sobic003G252400 Sobic003G252400 Sobic003G272400--Sobic003G252400 Sobic003G272400--Sobic002G306000 Sobic010G260300 Sobic010G260300 Sobic003G272400--Sobic010G260300 Sobic003G126300 Sobic003G126300 Sobic003G272400--Sobic003G126300 Sobic006G207900 Sobic006G207900 Sobic003G272400--Sobic006G207900 Sobic001G110900 Sobic001G110900 Sobic003G272400--Sobic001G110900 Sobic004G309600 Sobic004G309600 Sobic003G272400--Sobic004G309600 Sobic002G306000--Sobic004G353600 Sobic002G306000--Sobic003G272400 Sobic002G306000--Sobic003G281900 Sobic003G407200 Sobic003G407200 Sobic002G306000--Sobic003G407200 Sobic007G196900 Sobic007G196900 Sobic002G306000--Sobic007G196900 Sobic010G140500 Sobic010G140500 Sobic002G306000--Sobic010G140500 Sobic001G015800 Sobic001G015800 Sobic002G306000--Sobic001G015800 Sobic001G096000 Sobic001G096000 Sobic002G306000--Sobic001G096000 Sobic009G219000 Sobic009G219000 Sobic002G306000--Sobic009G219000 Sobic010G016500 Sobic010G016500 Sobic006G078300--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic006G078300--Sobic004G244300 Sobic006G078300--Sobic006G203000 Sobic001G075101 Sobic001G075101 Sobic006G078300--Sobic001G075101 Sobic004G281200 Sobic004G281200 Sobic006G078300--Sobic004G281200 Sobic006G194600 Sobic006G194600 Sobic006G078300--Sobic006G194600 Sobic001G509400 Sobic001G509400 Sobic006G078300--Sobic001G509400 Sobic006G078350 Sobic006G078350 Sobic006G078300--Sobic006G078350 Sobic006G078300--Sobic001G157400 Sobic003G087100--Sobic004G281200 Sobic002G037400 Sobic002G037400 Sobic003G087100--Sobic002G037400 Sobic003G087100--Sobic006G203000 Sobic008G059000 Sobic008G059000 Sobic003G087100--Sobic008G059000 Sobic002G110200 Sobic002G110200 Sobic003G087100--Sobic002G110200 Sobic003G087100--Sobic004G309600 Sobic003G424500 Sobic003G424500 Sobic003G087100--Sobic003G424500 Sobic001G081600 Sobic001G081600 Sobic003G087100--Sobic001G081600 Sobic003G087100--Sobic001G075101 Sobic001G155300 Sobic001G155300 Sobic003G378000--Sobic001G155300 Sobic004G170032 Sobic004G170032 Sobic003G378000--Sobic004G170032 Sobic003G378000--Sobic002G110200 Sobic003G378000--Sobic004G353600 Sobic003G378000--Sobic006G078350 Sobic007G143200 Sobic007G143200 Sobic003G378000--Sobic007G143200 Sobic002G023900 Sobic002G023900 Sobic003G378000--Sobic002G023900 Sobic007G143100 Sobic007G143100 Sobic003G378000--Sobic007G143100 Sobic007G169600 Sobic007G169600 Sobic003G378000--Sobic007G169600 Sobic001G050800 Sobic001G050800 Sobic001G157400--Sobic001G050800 Sobic001G157400--Sobic002G023900 Sobic006G026400 Sobic006G026400 Sobic001G157400--Sobic006G026400 Sobic002G068800 Sobic002G068800 Sobic001G157400--Sobic002G068800 Sobic003G278700 Sobic003G278700 Sobic001G157400--Sobic003G278700 Sobic003G227600 Sobic003G227600 Sobic001G157400--Sobic003G227600 Sobic006G032200 Sobic006G032200 Sobic001G157400--Sobic006G032200 Sobic001G157400--Sobic006G078300 Sobic009G170100 Sobic009G170100 Sobic001G157400--Sobic009G170100 Sobic004G236550 Sobic004G236550 Sobic003G332000--Sobic004G236550 Sobic003G332000--Sobic004G353600 Sobic003G374700 Sobic003G374700 Sobic003G332000--Sobic003G374700 Sobic009G118600 Sobic009G118600 Sobic003G332000--Sobic009G118600 Sobic001G005700 Sobic001G005700 Sobic003G332000--Sobic001G005700 Sobic009G136100 Sobic009G136100 Sobic003G332000--Sobic009G136100 Sobic002G225300 Sobic002G225300 Sobic003G332000--Sobic002G225300 Sobic009G079300 Sobic009G079300 Sobic003G332000--Sobic009G079300 Sobic007G131700 Sobic007G131700 Sobic003G332000--Sobic007G131700 Sobic001G075800--Sobic002G037400 Sobic001G075800--Sobic006G203000 Sobic004G244100 Sobic004G244100 Sobic001G075800--Sobic004G244100 Sobic001G075800--Sobic001G075101 Sobic009G167000 Sobic009G167000 Sobic001G075800--Sobic009G167000 Sobic001G075800--Sobic004G244300 Sobic001G075800--Sobic001G050800 Sobic001G075800--Sobic006G026400 Sobic001G075800--Sobic004G281200 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic006G203000--Sobic007G169600 Sobic002G331450 Sobic002G331450 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G203000--Sobic006G026400 Sobic006G203000--Sobic002G023900 Sobic006G203000--Sobic002G110200
Octagon: transcription factors


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