Gene annotation
Transcriptome id Sobic.002G306000.2,Sobic.002G306000.3
Synonym Sb02g033620
Functional annotation calmodulin-binding transcription activator 5, putative, expressed
UniProt A0A1B6QE93
Pfam PF00612 PF12796 PF03859
Panther DB PTHR23335 PTHR23335:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0005634nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G16940 : calmodulin binding;transcription regulators
RAP-DB (Rice) LOC_Os07g30774.1 : calmodulin-binding transcription activator 5, putative, expressed
MaizeGDB (Corn) Zm00025a048082
Brachypodium KQK16165
Barley HORVU2Hr1G051690.8 , HORVU2Hr1G051690.3 , HORVU2Hr1G051690.2 , HORVU2Hr1G051690.1 , HORVU2Hr1G051690.7 , HORVU2Hr1G051690.5 , HORVU2Hr1G051690.4 , HORVU2Hr1G051690.6
Wheat TraesCS2A02G229400 , TraesCS2A02G229400 , TraesCS2A02G229400 , TraesCS2A02G229400 , TraesCS2A02G229400 , TraesCS2B02G254000 , TraesCS2B02G254000 , TraesCS2D02G237300 , TraesCS2D02G237300 , TraesCS2D02G237300 , TraesCS2D02G237300 , TraesCS2D02G237300 , TraesCS2D02G237300 , TraesCS2B02G254100 , TraesCS2B02G254100
Populus -


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cDNA sequences
Sobic.002G306000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
2 Sobic.003G272400 DUF292 domain containing protein, expressed -
3 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
4 Sobic.003G407200 calmodulin-binding transcription activator, putative, expressed -
5 Sobic.007G196900 expressed protein -
6 Sobic.010G140500 bg55, putative, expressed -
7 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
9 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
10 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
11 Sobic.001G420800 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
12 Sobic.003G331400 expressed protein -
13 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
14 Sobic.001G163400 roothairless 1, putative, expressed -
15 Sobic.002G076866 - -
16 Sobic.003G328600 proline-rich family protein, putative, expressed -
17 Sobic.009G101300 phox domain-containing protein, putative, expressed -
18 Sobic.006G251000 STE_MEKK_ste11_MAP3K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
19 Sobic.004G344901 - K10357: myosin V
20 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic002G306000 Sobic002G306000 Sobic004G353600 Sobic004G353600 Sobic002G306000--Sobic004G353600 Sobic003G272400 Sobic003G272400 Sobic002G306000--Sobic003G272400 Sobic003G281900 Sobic003G281900 Sobic002G306000--Sobic003G281900 Sobic003G407200 Sobic003G407200 Sobic002G306000--Sobic003G407200 Sobic007G196900 Sobic007G196900 Sobic002G306000--Sobic007G196900 Sobic010G140500 Sobic010G140500 Sobic002G306000--Sobic010G140500 Sobic001G015800 Sobic001G015800 Sobic002G306000--Sobic001G015800 Sobic001G096000 Sobic001G096000 Sobic002G306000--Sobic001G096000 Sobic009G219000 Sobic009G219000 Sobic002G306000--Sobic009G219000 Sobic004G353600--Sobic003G272400 Sobic004G353600--Sobic002G306000 Sobic006G078300 Sobic006G078300 Sobic004G353600--Sobic006G078300 Sobic003G087100 Sobic003G087100 Sobic004G353600--Sobic003G087100 Sobic003G378000 Sobic003G378000 Sobic004G353600--Sobic003G378000 Sobic001G157400 Sobic001G157400 Sobic004G353600--Sobic001G157400 Sobic003G332000 Sobic003G332000 Sobic004G353600--Sobic003G332000 Sobic001G075800 Sobic001G075800 Sobic004G353600--Sobic001G075800 Sobic006G203000 Sobic006G203000 Sobic004G353600--Sobic006G203000 Sobic003G272400--Sobic004G353600 Sobic003G272400--Sobic003G281900 Sobic003G252400 Sobic003G252400 Sobic003G272400--Sobic003G252400 Sobic003G272400--Sobic002G306000 Sobic010G260300 Sobic010G260300 Sobic003G272400--Sobic010G260300 Sobic003G126300 Sobic003G126300 Sobic003G272400--Sobic003G126300 Sobic006G207900 Sobic006G207900 Sobic003G272400--Sobic006G207900 Sobic001G110900 Sobic001G110900 Sobic003G272400--Sobic001G110900 Sobic004G309600 Sobic004G309600 Sobic003G272400--Sobic004G309600 Sobic003G281900--Sobic003G272400 Sobic009G097300 Sobic009G097300 Sobic003G281900--Sobic009G097300 Sobic003G281900--Sobic002G306000 Sobic003G281900--Sobic003G126300 Sobic003G281900--Sobic004G353600 Sobic003G397500 Sobic003G397500 Sobic003G281900--Sobic003G397500 Sobic009G213000 Sobic009G213000 Sobic003G281900--Sobic009G213000 Sobic009G079300 Sobic009G079300 Sobic003G281900--Sobic009G079300 Sobic007G047700 Sobic007G047700 Sobic003G281900--Sobic007G047700 Sobic004G031600 Sobic004G031600 Sobic003G407200--Sobic004G031600 Sobic001G162100 Sobic001G162100 Sobic003G407200--Sobic001G162100 Sobic003G407200--Sobic002G306000 Sobic008G016900 Sobic008G016900 Sobic003G407200--Sobic008G016900 Sobic001G516100 Sobic001G516100 Sobic003G407200--Sobic001G516100 Sobic003G407200--Sobic003G272400 Sobic010G068500 Sobic010G068500 Sobic003G407200--Sobic010G068500 Sobic007G178200 Sobic007G178200 Sobic003G407200--Sobic007G178200 Sobic009G134600 Sobic009G134600 Sobic003G407200--Sobic009G134600 Sobic001G477700 Sobic001G477700 Sobic007G196900--Sobic001G477700 Sobic008G123500 Sobic008G123500 Sobic007G196900--Sobic008G123500 Sobic001G095500 Sobic001G095500 Sobic007G196900--Sobic001G095500 Sobic010G093100 Sobic010G093100 Sobic007G196900--Sobic010G093100 Sobic007G196900--Sobic002G306000 Sobic001G538700 Sobic001G538700 Sobic007G196900--Sobic001G538700 Sobic007G196900--Sobic004G353600 Sobic001G251200 Sobic001G251200 Sobic007G196900--Sobic001G251200 Sobic007G196900--Sobic001G096000 Sobic003G331400 Sobic003G331400 Sobic010G140500--Sobic003G331400 Sobic010G140500--Sobic002G306000 Sobic005G209500 Sobic005G209500 Sobic010G140500--Sobic005G209500 Sobic010G165300 Sobic010G165300 Sobic010G140500--Sobic010G165300 Sobic003G367300 Sobic003G367300 Sobic010G140500--Sobic003G367300 Sobic010G140500--Sobic003G126300 Sobic010G140500--Sobic009G079300 Sobic010G140500--Sobic003G272400 Sobic003G309200 Sobic003G309200 Sobic010G140500--Sobic003G309200 Sobic001G163400 Sobic001G163400 Sobic001G015800--Sobic001G163400 Sobic008G124900 Sobic008G124900 Sobic001G015800--Sobic008G124900 Sobic003G104000 Sobic003G104000 Sobic001G015800--Sobic003G104000 Sobic001G015800--Sobic003G331400 Sobic006G033200 Sobic006G033200 Sobic001G015800--Sobic006G033200 Sobic004G286500 Sobic004G286500 Sobic001G015800--Sobic004G286500 Sobic002G134600 Sobic002G134600 Sobic001G015800--Sobic002G134600 Sobic001G015800--Sobic001G096000 Sobic003G337300 Sobic003G337300 Sobic001G015800--Sobic003G337300 Sobic006G131000 Sobic006G131000 Sobic001G096000--Sobic006G131000 Sobic001G096000--Sobic008G124900 Sobic006G126100 Sobic006G126100 Sobic001G096000--Sobic006G126100 Sobic003G332500 Sobic003G332500 Sobic001G096000--Sobic003G332500 Sobic001G096000--Sobic003G104000 Sobic001G096000--Sobic003G337300 Sobic001G096000--Sobic001G477700 Sobic001G096000--Sobic001G163400 Sobic001G362200 Sobic001G362200 Sobic001G096000--Sobic001G362200 Sobic001G541100 Sobic001G541100 Sobic009G219000--Sobic001G541100 Sobic001G323000 Sobic001G323000 Sobic009G219000--Sobic001G323000 Sobic001G261456 Sobic001G261456 Sobic009G219000--Sobic001G261456 Sobic008G046500 Sobic008G046500 Sobic009G219000--Sobic008G046500 Sobic001G466700 Sobic001G466700 Sobic009G219000--Sobic001G466700 Sobic004G274400 Sobic004G274400 Sobic009G219000--Sobic004G274400 Sobic009G138100 Sobic009G138100 Sobic009G219000--Sobic009G138100 Sobic001G105500 Sobic001G105500 Sobic009G219000--Sobic001G105500 Sobic001G371200 Sobic001G371200 Sobic009G219000--Sobic001G371200
Octagon: transcription factors


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