Gene annotation
Transcriptome id Sobic.010G140500.1
Synonym Sb10g015690
Functional annotation bg55, putative, expressed
UniProt A0A194YJ63
Pfam PF04564
Panther DB PTHR22849 PTHR22849:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G24330 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os06g28590.3 : bg55, putative, expressed
MaizeGDB (Corn) Zm00025a050732
Brachypodium -
Barley -
Wheat TraesCS7D02G233400 , TraesCS7D02G233400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G331400 expressed protein -
2 Sobic.002G306000 calmodulin-binding transcription activator 5, putative, expressed -
3 Sobic.005G209500 expressed protein -
4 Sobic.010G165300 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
5 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
7 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
8 Sobic.003G272400 DUF292 domain containing protein, expressed -
9 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
10 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
11 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
12 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
13 Sobic.002G031100 resistance protein LR10, putative, expressed -
14 Sobic.001G312900 transporter family protein, putative, expressed -
15 Sobic.004G344901 - K10357: myosin V
16 Sobic.003G035100 no apical meristem protein, putative, expressed -
17 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
18 Sobic.003G407200 calmodulin-binding transcription activator, putative, expressed -
19 Sobic.010G228400 zinc finger, C3HC4 type, domain containing protein, expressed -
20 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -


Gene co-expression network
sample Sobic010G140500 Sobic010G140500 Sobic003G331400 Sobic003G331400 Sobic010G140500--Sobic003G331400 Sobic002G306000 Sobic002G306000 Sobic010G140500--Sobic002G306000 Sobic005G209500 Sobic005G209500 Sobic010G140500--Sobic005G209500 Sobic010G165300 Sobic010G165300 Sobic010G140500--Sobic010G165300 Sobic003G367300 Sobic003G367300 Sobic010G140500--Sobic003G367300 Sobic003G126300 Sobic003G126300 Sobic010G140500--Sobic003G126300 Sobic009G079300 Sobic009G079300 Sobic010G140500--Sobic009G079300 Sobic003G272400 Sobic003G272400 Sobic010G140500--Sobic003G272400 Sobic003G309200 Sobic003G309200 Sobic010G140500--Sobic003G309200 Sobic004G344901 Sobic004G344901 Sobic003G331400--Sobic004G344901 Sobic002G137400 Sobic002G137400 Sobic003G331400--Sobic002G137400 Sobic001G415300 Sobic001G415300 Sobic003G331400--Sobic001G415300 Sobic004G358400 Sobic004G358400 Sobic003G331400--Sobic004G358400 Sobic004G004300 Sobic004G004300 Sobic003G331400--Sobic004G004300 Sobic002G031100 Sobic002G031100 Sobic003G331400--Sobic002G031100 Sobic005G026200 Sobic005G026200 Sobic003G331400--Sobic005G026200 Sobic010G004100 Sobic010G004100 Sobic003G331400--Sobic010G004100 Sobic001G163400 Sobic001G163400 Sobic003G331400--Sobic001G163400 Sobic004G353600 Sobic004G353600 Sobic002G306000--Sobic004G353600 Sobic002G306000--Sobic003G272400 Sobic003G281900 Sobic003G281900 Sobic002G306000--Sobic003G281900 Sobic003G407200 Sobic003G407200 Sobic002G306000--Sobic003G407200 Sobic007G196900 Sobic007G196900 Sobic002G306000--Sobic007G196900 Sobic002G306000--Sobic010G140500 Sobic001G015800 Sobic001G015800 Sobic002G306000--Sobic001G015800 Sobic001G096000 Sobic001G096000 Sobic002G306000--Sobic001G096000 Sobic009G219000 Sobic009G219000 Sobic002G306000--Sobic009G219000 Sobic003G229000 Sobic003G229000 Sobic005G209500--Sobic003G229000 Sobic010G260300 Sobic010G260300 Sobic005G209500--Sobic010G260300 Sobic001G110900 Sobic001G110900 Sobic005G209500--Sobic001G110900 Sobic005G209500--Sobic003G272400 Sobic005G209500--Sobic010G140500 Sobic002G189000 Sobic002G189000 Sobic005G209500--Sobic002G189000 Sobic007G025800 Sobic007G025800 Sobic005G209500--Sobic007G025800 Sobic001G236400 Sobic001G236400 Sobic005G209500--Sobic001G236400 Sobic003G252400 Sobic003G252400 Sobic005G209500--Sobic003G252400 Sobic010G165300--Sobic010G140500 Sobic002G028700 Sobic002G028700 Sobic010G165300--Sobic002G028700 Sobic003G397500 Sobic003G397500 Sobic010G165300--Sobic003G397500 Sobic006G175900 Sobic006G175900 Sobic010G165300--Sobic006G175900 Sobic003G336100 Sobic003G336100 Sobic010G165300--Sobic003G336100 Sobic003G036600 Sobic003G036600 Sobic010G165300--Sobic003G036600 Sobic001G426800 Sobic001G426800 Sobic010G165300--Sobic001G426800 Sobic010G165300--Sobic003G126300 Sobic001G409300 Sobic001G409300 Sobic010G165300--Sobic001G409300 Sobic002G293300 Sobic002G293300 Sobic003G367300--Sobic002G293300 Sobic001G516100 Sobic001G516100 Sobic003G367300--Sobic001G516100 Sobic001G434900 Sobic001G434900 Sobic003G367300--Sobic001G434900 Sobic007G006600 Sobic007G006600 Sobic003G367300--Sobic007G006600 Sobic004G271700 Sobic004G271700 Sobic003G367300--Sobic004G271700 Sobic003G367300--Sobic009G079300 Sobic001G436000 Sobic001G436000 Sobic003G367300--Sobic001G436000 Sobic003G002400 Sobic003G002400 Sobic003G367300--Sobic003G002400 Sobic001G162100 Sobic001G162100 Sobic003G367300--Sobic001G162100 Sobic004G228800 Sobic004G228800 Sobic003G126300--Sobic004G228800 Sobic003G126300--Sobic009G079300 Sobic004G004200 Sobic004G004200 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic006G034000 Sobic006G034000 Sobic003G126300--Sobic006G034000 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic009G000200 Sobic009G000200 Sobic009G079300--Sobic009G000200 Sobic004G236550 Sobic004G236550 Sobic009G079300--Sobic004G236550 Sobic009G079300--Sobic003G126300 Sobic003G316300 Sobic003G316300 Sobic009G079300--Sobic003G316300 Sobic009G079300--Sobic007G025800 Sobic001G180900 Sobic001G180900 Sobic009G079300--Sobic001G180900 Sobic009G079300--Sobic003G272400 Sobic009G136100 Sobic009G136100 Sobic009G079300--Sobic009G136100 Sobic009G079300--Sobic003G367300 Sobic003G272400--Sobic004G353600 Sobic003G272400--Sobic003G281900 Sobic003G272400--Sobic003G252400 Sobic003G272400--Sobic002G306000 Sobic003G272400--Sobic010G260300 Sobic003G272400--Sobic003G126300 Sobic006G207900 Sobic006G207900 Sobic003G272400--Sobic006G207900 Sobic003G272400--Sobic001G110900 Sobic004G309600 Sobic004G309600 Sobic003G272400--Sobic004G309600 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic002G134600 Sobic002G134600 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic008G124900 Sobic008G124900 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100
Octagon: transcription factors


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