Gene annotation
Transcriptome id Sobic.001G312900.1
Synonym Sb01g030430, TMT2
Functional annotation transporter family protein, putative, expressed
UniProt C5WTL2
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF8
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G35300 : tonoplast monosaccharide transporter2
RAP-DB (Rice) LOC_Os10g39440.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a003188
Brachypodium -
Barley HORVU1Hr1G052040.1
Wheat TraesCS1D02G204900 , TraesCS1B02G215800 , TraesCS1B02G215800 , TraesCS1A02G201600 , TraesCS1A02G201600 , TraesCS1A02G201600
Populus -


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cDNA sequences
Sobic.001G312900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
2 Sobic.003G109700 expressed protein -
3 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
4 Sobic.004G004300 expressed protein -
5 Sobic.002G350600 HEAT repeat family protein, putative, expressed -
6 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
7 Sobic.009G042700 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
8 Sobic.006G052500 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed K00164: OGDH, 2-oxoglutarate dehydrogenase E1 component
9 Sobic.003G331400 expressed protein -
10 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
11 Sobic.001G034300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
12 Sobic.007G196900 expressed protein -
13 Sobic.007G167200 OsSCP41 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
14 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.006G251000 STE_MEKK_ste11_MAP3K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
16 Sobic.002G067600 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
17 Sobic.003G372800 expressed protein -
18 Sobic.004G088450 - K17302: COPB2, coatomer subunit beta'
19 Sobic.002G119700 ankyrin repeat domain containing protein, expressed -
20 Sobic.003G328600 proline-rich family protein, putative, expressed -


Gene co-expression network
sample Sobic001G312900 Sobic001G312900 Sobic001G362200 Sobic001G362200 Sobic001G312900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic001G312900--Sobic003G109700 Sobic002G134600 Sobic002G134600 Sobic001G312900--Sobic002G134600 Sobic004G004300 Sobic004G004300 Sobic001G312900--Sobic004G004300 Sobic002G350600 Sobic002G350600 Sobic001G312900--Sobic002G350600 Sobic006G280000 Sobic006G280000 Sobic001G312900--Sobic006G280000 Sobic009G042700 Sobic009G042700 Sobic001G312900--Sobic009G042700 Sobic006G052500 Sobic006G052500 Sobic001G312900--Sobic006G052500 Sobic003G331400 Sobic003G331400 Sobic001G312900--Sobic003G331400 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic001G362200--Sobic003G109700 Sobic006G032900 Sobic006G032900 Sobic001G362200--Sobic006G032900 Sobic001G102700 Sobic001G102700 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic001G362200--Sobic002G134600 Sobic007G183900 Sobic007G183900 Sobic001G362200--Sobic007G183900 Sobic003G109700--Sobic001G362200 Sobic010G056000 Sobic010G056000 Sobic003G109700--Sobic010G056000 Sobic003G109700--Sobic006G032900 Sobic008G125501 Sobic008G125501 Sobic003G109700--Sobic008G125501 Sobic003G372800 Sobic003G372800 Sobic003G109700--Sobic003G372800 Sobic010G028800 Sobic010G028800 Sobic003G109700--Sobic010G028800 Sobic001G222250 Sobic001G222250 Sobic003G109700--Sobic001G222250 Sobic001G267900 Sobic001G267900 Sobic003G109700--Sobic001G267900 Sobic009G103600 Sobic009G103600 Sobic003G109700--Sobic009G103600 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic001G281100 Sobic001G281100 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic001G534800 Sobic001G534800 Sobic004G004300--Sobic001G534800 Sobic006G126100 Sobic006G126100 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic001G415300 Sobic001G415300 Sobic004G004300--Sobic001G415300 Sobic010G275500 Sobic010G275500 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic002G350600--Sobic006G280000 Sobic008G135200 Sobic008G135200 Sobic002G350600--Sobic008G135200 Sobic001G251100 Sobic001G251100 Sobic002G350600--Sobic001G251100 Sobic007G054800 Sobic007G054800 Sobic002G350600--Sobic007G054800 Sobic003G104000 Sobic003G104000 Sobic002G350600--Sobic003G104000 Sobic004G040900 Sobic004G040900 Sobic002G350600--Sobic004G040900 Sobic002G350600--Sobic001G312900 Sobic002G350600--Sobic002G294800 Sobic002G350600--Sobic001G362200 Sobic006G280000--Sobic007G054800 Sobic001G542500 Sobic001G542500 Sobic006G280000--Sobic001G542500 Sobic006G280000--Sobic004G004300 Sobic002G256700 Sobic002G256700 Sobic006G280000--Sobic002G256700 Sobic003G337300 Sobic003G337300 Sobic006G280000--Sobic003G337300 Sobic001G089600 Sobic001G089600 Sobic006G280000--Sobic001G089600 Sobic006G280000--Sobic003G104000 Sobic001G287500 Sobic001G287500 Sobic006G280000--Sobic001G287500 Sobic006G280000--Sobic001G117200 Sobic010G053800 Sobic010G053800 Sobic009G042700--Sobic010G053800 Sobic004G002400 Sobic004G002400 Sobic009G042700--Sobic004G002400 Sobic009G042700--Sobic009G219000 Sobic001G466700 Sobic001G466700 Sobic009G042700--Sobic001G466700 Sobic009G042700--Sobic004G004300 Sobic001G152280 Sobic001G152280 Sobic009G042700--Sobic001G152280 Sobic009G042700--Sobic001G281100 Sobic001G220300 Sobic001G220300 Sobic009G042700--Sobic001G220300 Sobic009G042700--Sobic006G052500 Sobic002G310200 Sobic002G310200 Sobic006G052500--Sobic002G310200 Sobic006G052500--Sobic009G219000 Sobic006G052500--Sobic009G042700 Sobic002G067600 Sobic002G067600 Sobic006G052500--Sobic002G067600 Sobic007G203500 Sobic007G203500 Sobic006G052500--Sobic007G203500 Sobic006G052800 Sobic006G052800 Sobic006G052500--Sobic006G052800 Sobic006G052500--Sobic010G053800 Sobic007G134600 Sobic007G134600 Sobic006G052500--Sobic007G134600 Sobic006G052500--Sobic010G056000 Sobic004G344901 Sobic004G344901 Sobic003G331400--Sobic004G344901 Sobic002G137400 Sobic002G137400 Sobic003G331400--Sobic002G137400 Sobic003G331400--Sobic001G415300 Sobic004G358400 Sobic004G358400 Sobic003G331400--Sobic004G358400 Sobic003G331400--Sobic004G004300 Sobic002G031100 Sobic002G031100 Sobic003G331400--Sobic002G031100 Sobic003G331400--Sobic005G026200 Sobic010G004100 Sobic010G004100 Sobic003G331400--Sobic010G004100 Sobic001G163400 Sobic001G163400 Sobic003G331400--Sobic001G163400
Octagon: transcription factors


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