Gene annotation
Transcriptome id Sobic.001G034300.2,Sobic.001G034300.1,Sobic.001G034300.3
Synonym SbDof4, Sb01g003210, DNA binding with One Finger
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt C5WV12 , G3LI09 , E6PBL1 , R4N5V8
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G55370 : OBF-binding protein 3
RAP-DB (Rice) LOC_Os03g60630.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a008812 , Zm00025a017356 , Zm00025a037944 , Zm00025a032602 , Zm00025a006998 , Zm00025a040930 , Zm00025a016727 , Zm00025a038256 , Zm00025a044220 , Zm00025a016425 , Zm00025a008811 , Zm00025a008288 , Zm00025a017812 , Zm00025a027510 , Zm00025a040004
Brachypodium KQK22335 , KQK07701 , KQK11789 , PNT69485 , KQK09823 , KQJ86253 , KQJ96615
Barley HORVU5Hr1G097600.1 , HORVU1Hr1G076800.1 , HORVU3Hr1G116220.1 , HORVU5Hr1G097620.1 , HORVU5Hr1G021290.5 , HORVU5Hr1G113190.1 , HORVU5Hr1G021290.2 , HORVU5Hr1G021290.1 , HORVU5Hr1G113190.2 , HORVU3Hr1G116220.2 , HORVU5Hr1G113220.1 , HORVU5Hr1G113220.2 , HORVU5Hr1G113220.3 , HORVU5Hr1G113220.4 , HORVU5Hr1G113220.5 , HORVU5Hr1G113220.6 , HORVU1Hr1G005390.4 , HORVU1Hr1G005390.1 , HORVU1Hr1G005390.2 , HORVU1Hr1G005390.3 , HORVU3Hr1G116260.1 , HORVU3Hr1G116260.2
Wheat TraesCS2A02G402200 , TraesCS3D02G537400 , TraesCS1A02G035200 , TraesCS5A02G078100 , TraesCS5A02G078100 , TraesCS2D02G399500 , TraesCS3A02G403500 , TraesCS5D02G493000 , TraesCS5D02G093800 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS5B02G492600 , TraesCS5D02G093800 , TraesCS3A02G532000 , TraesCS1D02G036700 , TraesCS1D02G036700 , TraesCS6B02G270100 , TraesCS3B02G608800 , TraesCS2B02G420400 , TraesCS5A02G479400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
2 Sobic.004G004200 expressed protein -
3 Sobic.002G119700 ankyrin repeat domain containing protein, expressed -
4 Sobic.009G138200 inactive receptor kinase At1g27190 precursor, putative, expressed -
5 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
6 Sobic.001G312900 transporter family protein, putative, expressed -
7 Sobic.004G004300 expressed protein -
8 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
9 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
10 Sobic.004G233200 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
11 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
12 Sobic.001G262700 hhH-GPD superfamily base excision DNA repair protein, putative, expressed -
13 Sobic.010G072500 - -
14 Sobic.001G222250 - -
15 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
16 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
17 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
18 Sobic.001G001900 THION30 - Plant thionin family protein precursor, expressed -
19 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
20 Sobic.003G159600 auxilin, putative, expressed -


Gene co-expression network
sample Sobic001G034300 Sobic001G034300 Sobic001G251200 Sobic001G251200 Sobic001G034300--Sobic001G251200 Sobic004G004200 Sobic004G004200 Sobic001G034300--Sobic004G004200 Sobic002G119700 Sobic002G119700 Sobic001G034300--Sobic002G119700 Sobic009G138200 Sobic009G138200 Sobic001G034300--Sobic009G138200 Sobic003G126300 Sobic003G126300 Sobic001G034300--Sobic003G126300 Sobic001G312900 Sobic001G312900 Sobic001G034300--Sobic001G312900 Sobic004G004300 Sobic004G004300 Sobic001G034300--Sobic004G004300 Sobic003G036800 Sobic003G036800 Sobic001G034300--Sobic003G036800 Sobic002G134600 Sobic002G134600 Sobic001G034300--Sobic002G134600 Sobic003G362600 Sobic003G362600 Sobic001G251200--Sobic003G362600 Sobic001G128300 Sobic001G128300 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic001G251200--Sobic004G004300 Sobic004G261600 Sobic004G261600 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic006G131000 Sobic006G131000 Sobic001G251200--Sobic006G131000 Sobic001G281100 Sobic001G281100 Sobic001G251200--Sobic001G281100 Sobic004G004200--Sobic004G004300 Sobic004G004200--Sobic001G281100 Sobic002G430000 Sobic002G430000 Sobic004G004200--Sobic002G430000 Sobic004G269200 Sobic004G269200 Sobic004G004200--Sobic004G269200 Sobic001G101100 Sobic001G101100 Sobic004G004200--Sobic001G101100 Sobic004G004200--Sobic001G251200 Sobic004G004200--Sobic004G261600 Sobic002G270500 Sobic002G270500 Sobic004G004200--Sobic002G270500 Sobic004G004200--Sobic003G126300 Sobic002G119700--Sobic001G034300 Sobic002G119700--Sobic009G138200 Sobic010G072500 Sobic010G072500 Sobic002G119700--Sobic010G072500 Sobic006G033200 Sobic006G033200 Sobic002G119700--Sobic006G033200 Sobic003G272400 Sobic003G272400 Sobic002G119700--Sobic003G272400 Sobic001G262700 Sobic001G262700 Sobic002G119700--Sobic001G262700 Sobic002G119700--Sobic003G126300 Sobic003G309200 Sobic003G309200 Sobic002G119700--Sobic003G309200 Sobic009G079300 Sobic009G079300 Sobic002G119700--Sobic009G079300 Sobic010G130000 Sobic010G130000 Sobic009G138200--Sobic010G130000 Sobic009G138200--Sobic002G119700 Sobic009G138100 Sobic009G138100 Sobic009G138200--Sobic009G138100 Sobic009G138200--Sobic001G034300 Sobic001G180900 Sobic001G180900 Sobic009G138200--Sobic001G180900 Sobic001G503300 Sobic001G503300 Sobic009G138200--Sobic001G503300 Sobic009G138200--Sobic002G134600 Sobic006G034000 Sobic006G034000 Sobic009G138200--Sobic006G034000 Sobic002G301800 Sobic002G301800 Sobic009G138200--Sobic002G301800 Sobic004G228800 Sobic004G228800 Sobic003G126300--Sobic004G228800 Sobic003G126300--Sobic009G079300 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic003G126300--Sobic004G261600 Sobic003G126300--Sobic006G034000 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic003G126300--Sobic006G033200 Sobic001G362200 Sobic001G362200 Sobic001G312900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic001G312900--Sobic003G109700 Sobic001G312900--Sobic002G134600 Sobic001G312900--Sobic004G004300 Sobic002G350600 Sobic002G350600 Sobic001G312900--Sobic002G350600 Sobic006G280000 Sobic006G280000 Sobic001G312900--Sobic006G280000 Sobic009G042700 Sobic009G042700 Sobic001G312900--Sobic009G042700 Sobic006G052500 Sobic006G052500 Sobic001G312900--Sobic006G052500 Sobic003G331400 Sobic003G331400 Sobic001G312900--Sobic003G331400 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic001G534800 Sobic001G534800 Sobic004G004300--Sobic001G534800 Sobic006G126100 Sobic006G126100 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004300--Sobic004G004200 Sobic001G415300 Sobic001G415300 Sobic004G004300--Sobic001G415300 Sobic010G275500 Sobic010G275500 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic003G036800--Sobic001G281100 Sobic003G036800--Sobic004G269200 Sobic003G036800--Sobic004G261600 Sobic004G002400 Sobic004G002400 Sobic003G036800--Sobic004G002400 Sobic003G036800--Sobic004G004200 Sobic007G060201 Sobic007G060201 Sobic003G036800--Sobic007G060201 Sobic003G195500 Sobic003G195500 Sobic003G036800--Sobic003G195500 Sobic010G072800 Sobic010G072800 Sobic003G036800--Sobic010G072800 Sobic003G036800--Sobic001G251200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300
Octagon: transcription factors


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