Gene annotation
Transcriptome id Sobic.002G119700.1
Synonym Sb02g010220
Functional annotation ankyrin repeat domain containing protein, expressed
UniProt C5X501
Pfam PF13857 PF11904
Panther DB PTHR12447 PTHR12447:SF8
NCBI CDD KOG0522; Ankyrin repeat protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04780 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os07g25460.1 : ankyrin repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022551 , Zm00025a045777 , Zm00025a013585 , Zm00025a032837
Brachypodium KQK01283 , KQK16490
Barley HORVU2Hr1G052030.1 , HORVU2Hr1G052030.4
Wheat TraesCS2A02G237500 , TraesCS2A02G237500 , TraesCS2D02G236000 , TraesCSU02G145200 , TraesCSU02G145200 , TraesCSU02G145200
Populus -


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cDNA sequences
Sobic.002G119700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G034300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
2 Sobic.009G138200 inactive receptor kinase At1g27190 precursor, putative, expressed -
3 Sobic.010G072500 - -
4 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
5 Sobic.003G272400 DUF292 domain containing protein, expressed -
6 Sobic.001G262700 hhH-GPD superfamily base excision DNA repair protein, putative, expressed -
7 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
8 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
9 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
10 Sobic.001G312900 transporter family protein, putative, expressed -
11 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
12 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
13 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
14 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
15 Sobic.007G203300 CDK-activating kinase assembly factor MAT1 family protein, expressed K10842: CDK-activating kinase assembly factor MAT1
16 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
17 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
18 Sobic.001G095500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY121, expressed -
19 Sobic.001G538700 exostosin family domain containing protein, expressed -
20 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G119700 Sobic002G119700 Sobic001G034300 Sobic001G034300 Sobic002G119700--Sobic001G034300 Sobic009G138200 Sobic009G138200 Sobic002G119700--Sobic009G138200 Sobic010G072500 Sobic010G072500 Sobic002G119700--Sobic010G072500 Sobic006G033200 Sobic006G033200 Sobic002G119700--Sobic006G033200 Sobic003G272400 Sobic003G272400 Sobic002G119700--Sobic003G272400 Sobic001G262700 Sobic001G262700 Sobic002G119700--Sobic001G262700 Sobic003G126300 Sobic003G126300 Sobic002G119700--Sobic003G126300 Sobic003G309200 Sobic003G309200 Sobic002G119700--Sobic003G309200 Sobic009G079300 Sobic009G079300 Sobic002G119700--Sobic009G079300 Sobic001G251200 Sobic001G251200 Sobic001G034300--Sobic001G251200 Sobic004G004200 Sobic004G004200 Sobic001G034300--Sobic004G004200 Sobic001G034300--Sobic002G119700 Sobic001G034300--Sobic009G138200 Sobic001G034300--Sobic003G126300 Sobic001G312900 Sobic001G312900 Sobic001G034300--Sobic001G312900 Sobic004G004300 Sobic004G004300 Sobic001G034300--Sobic004G004300 Sobic003G036800 Sobic003G036800 Sobic001G034300--Sobic003G036800 Sobic002G134600 Sobic002G134600 Sobic001G034300--Sobic002G134600 Sobic010G130000 Sobic010G130000 Sobic009G138200--Sobic010G130000 Sobic009G138200--Sobic002G119700 Sobic009G138100 Sobic009G138100 Sobic009G138200--Sobic009G138100 Sobic009G138200--Sobic001G034300 Sobic001G180900 Sobic001G180900 Sobic009G138200--Sobic001G180900 Sobic001G503300 Sobic001G503300 Sobic009G138200--Sobic001G503300 Sobic009G138200--Sobic002G134600 Sobic006G034000 Sobic006G034000 Sobic009G138200--Sobic006G034000 Sobic002G301800 Sobic002G301800 Sobic009G138200--Sobic002G301800 Sobic010G072500--Sobic002G119700 Sobic010G072500--Sobic001G034300 Sobic010G072500--Sobic001G251200 Sobic005G087900 Sobic005G087900 Sobic010G072500--Sobic005G087900 Sobic010G072500--Sobic004G004300 Sobic001G128300 Sobic001G128300 Sobic010G072500--Sobic001G128300 Sobic010G072500--Sobic001G312900 Sobic007G203300 Sobic007G203300 Sobic010G072500--Sobic007G203300 Sobic007G056600 Sobic007G056600 Sobic010G072500--Sobic007G056600 Sobic006G033200--Sobic010G130000 Sobic008G124900 Sobic008G124900 Sobic006G033200--Sobic008G124900 Sobic010G278200 Sobic010G278200 Sobic006G033200--Sobic010G278200 Sobic006G033200--Sobic009G138100 Sobic007G093800 Sobic007G093800 Sobic006G033200--Sobic007G093800 Sobic004G202500 Sobic004G202500 Sobic006G033200--Sobic004G202500 Sobic007G179800 Sobic007G179800 Sobic006G033200--Sobic007G179800 Sobic003G302900 Sobic003G302900 Sobic006G033200--Sobic003G302900 Sobic003G312200 Sobic003G312200 Sobic006G033200--Sobic003G312200 Sobic004G353600 Sobic004G353600 Sobic003G272400--Sobic004G353600 Sobic003G281900 Sobic003G281900 Sobic003G272400--Sobic003G281900 Sobic003G252400 Sobic003G252400 Sobic003G272400--Sobic003G252400 Sobic002G306000 Sobic002G306000 Sobic003G272400--Sobic002G306000 Sobic010G260300 Sobic010G260300 Sobic003G272400--Sobic010G260300 Sobic003G272400--Sobic003G126300 Sobic006G207900 Sobic006G207900 Sobic003G272400--Sobic006G207900 Sobic001G110900 Sobic001G110900 Sobic003G272400--Sobic001G110900 Sobic004G309600 Sobic004G309600 Sobic003G272400--Sobic004G309600 Sobic001G262700--Sobic003G309200 Sobic005G104400 Sobic005G104400 Sobic001G262700--Sobic005G104400 Sobic003G372500 Sobic003G372500 Sobic001G262700--Sobic003G372500 Sobic005G182000 Sobic005G182000 Sobic001G262700--Sobic005G182000 Sobic007G207000 Sobic007G207000 Sobic001G262700--Sobic007G207000 Sobic001G262700--Sobic002G134600 Sobic009G161550 Sobic009G161550 Sobic001G262700--Sobic009G161550 Sobic010G223700 Sobic010G223700 Sobic001G262700--Sobic010G223700 Sobic002G400200 Sobic002G400200 Sobic001G262700--Sobic002G400200 Sobic004G228800 Sobic004G228800 Sobic003G126300--Sobic004G228800 Sobic003G126300--Sobic009G079300 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic003G126300--Sobic006G034000 Sobic003G126300--Sobic003G272400 Sobic003G126300--Sobic007G056600 Sobic003G126300--Sobic006G033200 Sobic003G309200--Sobic010G223700 Sobic003G309200--Sobic002G134600 Sobic003G309200--Sobic001G262700 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100 Sobic009G000200 Sobic009G000200 Sobic009G079300--Sobic009G000200 Sobic004G236550 Sobic004G236550 Sobic009G079300--Sobic004G236550 Sobic009G079300--Sobic003G126300 Sobic003G316300 Sobic003G316300 Sobic009G079300--Sobic003G316300 Sobic007G025800 Sobic007G025800 Sobic009G079300--Sobic007G025800 Sobic009G079300--Sobic001G180900 Sobic009G079300--Sobic003G272400 Sobic009G136100 Sobic009G136100 Sobic009G079300--Sobic009G136100 Sobic003G367300 Sobic003G367300 Sobic009G079300--Sobic003G367300
Octagon: transcription factors


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