Gene annotation
Transcriptome id Sobic.001G001900.1
Synonym Sb01g000300, LUH
Functional annotation THION30 - Plant thionin family protein precursor, expressed
UniProt A0A1B6QGQ1
Pfam PF08513 PF00400
Panther DB PTHR22847 PTHR22847:SF429
NCBI CDD KOG0266; WD40 repeat-containing protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G32700 : LEUNIG_homolog
RAP-DB (Rice) LOC_Os03g64300.1 : THION30 - Plant thionin family protein precursor, expressed
MaizeGDB (Corn) Zm00025a009147
Brachypodium KQK11946 , KQK11947
Barley HORVU5Hr1G125650.20 , HORVU5Hr1G125650.16 , HORVU5Hr1G125650.17 , HORVU5Hr1G125650.14 , HORVU5Hr1G125650.15 , HORVU5Hr1G125650.12 , HORVU5Hr1G125650.13 , HORVU5Hr1G125650.10 , HORVU5Hr1G125650.11 , HORVU5Hr1G125650.18 , HORVU5Hr1G125650.19 , HORVU5Hr1G125650.4 , HORVU5Hr1G125650.5 , HORVU5Hr1G125650.6 , HORVU5Hr1G125650.7 , HORVU5Hr1G125650.1 , HORVU5Hr1G125650.2 , HORVU5Hr1G125650.3 , HORVU5Hr1G125650.8 , HORVU5Hr1G125650.9
Wheat TraesCS7B02G003100 , TraesCS7B02G003100 , TraesCS7B02G003100 , TraesCS7B02G003100 , TraesCS5B02G568500 , TraesCS5B02G568500 , TraesCS5D02G560700 , TraesCS5D02G560700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
2 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
3 Sobic.003G422500 expressed protein -
4 Sobic.003G170900 - -
5 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
6 Sobic.004G182201 - -
7 Sobic.001G154900 "GL3.1/qGL3(Ortholog in rice:Qi et al., 2012, Zhang et al., 2012)"(PubMedID : 31659834)@serine/threonine protein phosphatase, putative, expressed -
8 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
9 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
10 Sobic.007G186900 PP2A regulatory subunit TAP46, putative, expressed -
11 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
12 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
13 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
14 Sobic.001G125200 HEAT repeat family protein, putative, expressed -
15 Sobic.008G087866 - -
16 Sobic.007G207000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL15 - SBP-box gene family member, expressed -
17 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
18 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
19 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
20 Sobic.009G191000 MATH domain containing protein, expressed -


Gene co-expression network
sample Sobic001G001900 Sobic001G001900 Sobic009G165700 Sobic009G165700 Sobic001G001900--Sobic009G165700 Sobic001G474600 Sobic001G474600 Sobic001G001900--Sobic001G474600 Sobic003G422500 Sobic003G422500 Sobic001G001900--Sobic003G422500 Sobic003G170900 Sobic003G170900 Sobic001G001900--Sobic003G170900 Sobic001G451400 Sobic001G451400 Sobic001G001900--Sobic001G451400 Sobic004G182201 Sobic004G182201 Sobic001G001900--Sobic004G182201 Sobic001G154900 Sobic001G154900 Sobic001G001900--Sobic001G154900 Sobic003G362600 Sobic003G362600 Sobic001G001900--Sobic003G362600 Sobic004G091100 Sobic004G091100 Sobic001G001900--Sobic004G091100 Sobic009G165700--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic009G165700--Sobic010G247800 Sobic010G206900 Sobic010G206900 Sobic009G165700--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic009G165700--Sobic001G451400 Sobic009G165700--Sobic003G170900 Sobic001G534700 Sobic001G534700 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic003G280800 Sobic003G280800 Sobic001G474600--Sobic003G280800 Sobic009G166300 Sobic009G166300 Sobic001G474600--Sobic009G166300 Sobic001G125200 Sobic001G125200 Sobic001G474600--Sobic001G125200 Sobic003G372700 Sobic003G372700 Sobic001G474600--Sobic003G372700 Sobic007G217000 Sobic007G217000 Sobic001G474600--Sobic007G217000 Sobic007G096000 Sobic007G096000 Sobic001G474600--Sobic007G096000 Sobic007G207000 Sobic007G207000 Sobic001G474600--Sobic007G207000 Sobic009G191000 Sobic009G191000 Sobic001G474600--Sobic009G191000 Sobic001G241200 Sobic001G241200 Sobic001G474600--Sobic001G241200 Sobic002G411600 Sobic002G411600 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic003G422500--Sobic009G165700 Sobic002G008900 Sobic002G008900 Sobic003G422500--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic003G170900--Sobic009G165700 Sobic010G123600 Sobic010G123600 Sobic003G170900--Sobic010G123600 Sobic005G112300 Sobic005G112300 Sobic003G170900--Sobic005G112300 Sobic003G170900--Sobic010G206900 Sobic010G139000 Sobic010G139000 Sobic003G170900--Sobic010G139000 Sobic003G170900--Sobic003G422500 Sobic003G170900--Sobic003G166750 Sobic003G170900--Sobic010G247800 Sobic001G194200 Sobic001G194200 Sobic003G170900--Sobic001G194200 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic001G451400--Sobic009G165700 Sobic001G441400 Sobic001G441400 Sobic001G451400--Sobic001G441400 Sobic001G389100 Sobic001G389100 Sobic001G451400--Sobic001G389100 Sobic001G451400--Sobic010G247800 Sobic003G404500 Sobic003G404500 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic005G027400 Sobic005G027400 Sobic001G451400--Sobic005G027400 Sobic001G451400--Sobic003G422500 Sobic004G182201--Sobic001G241200 Sobic006G131500 Sobic006G131500 Sobic004G182201--Sobic006G131500 Sobic003G225700 Sobic003G225700 Sobic004G182201--Sobic003G225700 Sobic006G222300 Sobic006G222300 Sobic004G182201--Sobic006G222300 Sobic004G204200 Sobic004G204200 Sobic004G182201--Sobic004G204200 Sobic005G008800 Sobic005G008800 Sobic004G182201--Sobic005G008800 Sobic004G182201--Sobic001G154900 Sobic004G182201--Sobic001G474600 Sobic010G136600 Sobic010G136600 Sobic004G182201--Sobic010G136600 Sobic002G309600 Sobic002G309600 Sobic001G154900--Sobic002G309600 Sobic001G154900--Sobic001G289600 Sobic001G154900--Sobic001G241200 Sobic010G069100 Sobic010G069100 Sobic001G154900--Sobic010G069100 Sobic001G154900--Sobic005G008800 Sobic007G117400 Sobic007G117400 Sobic001G154900--Sobic007G117400 Sobic004G065100 Sobic004G065100 Sobic001G154900--Sobic004G065100 Sobic004G009600 Sobic004G009600 Sobic001G154900--Sobic004G009600 Sobic007G105100 Sobic007G105100 Sobic001G154900--Sobic007G105100 Sobic003G362600--Sobic009G165700 Sobic001G251200 Sobic001G251200 Sobic003G362600--Sobic001G251200 Sobic003G362600--Sobic003G166750 Sobic002G211800 Sobic002G211800 Sobic003G362600--Sobic002G211800 Sobic003G362600--Sobic008G087866 Sobic004G023000 Sobic004G023000 Sobic003G362600--Sobic004G023000 Sobic003G093800 Sobic003G093800 Sobic003G362600--Sobic003G093800 Sobic003G362600--Sobic004G091100 Sobic003G362600--Sobic001G441400 Sobic004G091100--Sobic009G165700 Sobic004G091100--Sobic001G451400 Sobic010G118950 Sobic010G118950 Sobic004G091100--Sobic010G118950 Sobic004G091100--Sobic009G191000 Sobic004G091100--Sobic008G087866 Sobic001G128300 Sobic001G128300 Sobic004G091100--Sobic001G128300 Sobic004G091100--Sobic001G534700 Sobic004G091100--Sobic003G422500 Sobic001G050200 Sobic001G050200 Sobic004G091100--Sobic001G050200
Octagon: transcription factors


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