Gene annotation
Transcriptome id Sobic.003G372800.1
Synonym Sb03g041340
Functional annotation expressed protein
UniProt C5XRA9
Pfam PF11961 PF05003
Panther DB PTHR31730 PTHR31730:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34320 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os01g65330.1 : expressed protein
MaizeGDB (Corn) Zm00025a026629 , Zm00025a039544
Brachypodium KQK06090 , KQK06091 , KQK10834
Barley HORVU3Hr1G082170.3 , HORVU3Hr1G082170.2 , HORVU3Hr1G082170.13 , HORVU3Hr1G082170.12 , HORVU3Hr1G082170.11 , HORVU3Hr1G082170.17 , HORVU3Hr1G082170.16 , HORVU3Hr1G082170.15 , HORVU3Hr1G082170.14 , HORVU3Hr1G082170.19 , HORVU3Hr1G082170.18 , HORVU3Hr1G082170.9 , HORVU3Hr1G082170.8 , HORVU3Hr1G082170.10 , HORVU3Hr1G082170.22 , HORVU3Hr1G082170.23 , HORVU3Hr1G082170.20 , HORVU3Hr1G082170.21 , HORVU3Hr1G082170.1 , HORVU3Hr1G082170.5 , HORVU3Hr1G082170.4 , HORVU3Hr1G082170.24 , HORVU3Hr1G082170.25 , HORVU3Hr1G082170.7 , HORVU3Hr1G082170.6
Wheat TraesCS1A02G269100 , TraesCS1A02G269100 , TraesCS1A02G269100 , TraesCS3A02G384200 , TraesCS3A02G384200 , TraesCS1D02G269200 , TraesCS1D02G269200 , TraesCS1D02G269200 , TraesCS1D02G269200 , TraesCS1D02G269200 , TraesCS3D02G377100 , TraesCS3D02G377100 , TraesCS3B02G416200 , TraesCS3B02G416200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G184500 RING-H2 finger protein, putative, expressed -
2 Sobic.003G109700 expressed protein -
3 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
4 Sobic.003G031800 ZOS1-04 - C2H2 zinc finger protein, expressed -
5 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
6 Sobic.001G312900 transporter family protein, putative, expressed -
7 Sobic.003G035100 no apical meristem protein, putative, expressed -
8 Sobic.002G350600 HEAT repeat family protein, putative, expressed -
9 Sobic.002G110300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@UBX domain-containing protein, putative, expressed -
10 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
11 Sobic.004G246900 ankyrin repeat-containing protein, putative, expressed -
12 Sobic.004G192200 choline transporter-related, putative, expressed -
13 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
14 Sobic.010G076300 - -
15 Sobic.008G080200 leucine-rich repeat family protein, putative, expressed -
16 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
17 Sobic.001G102700 metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed K01404: leishmanolysin
18 Sobic.007G186900 PP2A regulatory subunit TAP46, putative, expressed -
19 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
20 Sobic.010G072500 - -


Gene co-expression network
sample Sobic003G372800 Sobic003G372800 Sobic006G184500 Sobic006G184500 Sobic003G372800--Sobic006G184500 Sobic003G109700 Sobic003G109700 Sobic003G372800--Sobic003G109700 Sobic002G134600 Sobic002G134600 Sobic003G372800--Sobic002G134600 Sobic003G031800 Sobic003G031800 Sobic003G372800--Sobic003G031800 Sobic001G362200 Sobic001G362200 Sobic003G372800--Sobic001G362200 Sobic001G312900 Sobic001G312900 Sobic003G372800--Sobic001G312900 Sobic003G035100 Sobic003G035100 Sobic003G372800--Sobic003G035100 Sobic002G350600 Sobic002G350600 Sobic003G372800--Sobic002G350600 Sobic002G110300 Sobic002G110300 Sobic003G372800--Sobic002G110300 Sobic006G184500--Sobic003G372800 Sobic006G184500--Sobic002G134600 Sobic001G191600 Sobic001G191600 Sobic006G184500--Sobic001G191600 Sobic006G184500--Sobic003G109700 Sobic007G186900 Sobic007G186900 Sobic006G184500--Sobic007G186900 Sobic006G142775 Sobic006G142775 Sobic006G184500--Sobic006G142775 Sobic009G233300 Sobic009G233300 Sobic006G184500--Sobic009G233300 Sobic001G387600 Sobic001G387600 Sobic006G184500--Sobic001G387600 Sobic001G226700 Sobic001G226700 Sobic006G184500--Sobic001G226700 Sobic003G109700--Sobic001G362200 Sobic010G056000 Sobic010G056000 Sobic003G109700--Sobic010G056000 Sobic006G032900 Sobic006G032900 Sobic003G109700--Sobic006G032900 Sobic008G125501 Sobic008G125501 Sobic003G109700--Sobic008G125501 Sobic003G109700--Sobic003G372800 Sobic010G028800 Sobic010G028800 Sobic003G109700--Sobic010G028800 Sobic001G222250 Sobic001G222250 Sobic003G109700--Sobic001G222250 Sobic001G267900 Sobic001G267900 Sobic003G109700--Sobic001G267900 Sobic009G103600 Sobic009G103600 Sobic003G109700--Sobic009G103600 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic003G031800--Sobic003G372800 Sobic006G220300 Sobic006G220300 Sobic003G031800--Sobic006G220300 Sobic010G260300 Sobic010G260300 Sobic003G031800--Sobic010G260300 Sobic004G257350 Sobic004G257350 Sobic003G031800--Sobic004G257350 Sobic003G031800--Sobic002G110300 Sobic003G031800--Sobic002G134600 Sobic001G127200 Sobic001G127200 Sobic003G031800--Sobic001G127200 Sobic010G072500 Sobic010G072500 Sobic003G031800--Sobic010G072500 Sobic005G209500 Sobic005G209500 Sobic003G031800--Sobic005G209500 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic001G362200--Sobic003G109700 Sobic001G362200--Sobic006G032900 Sobic001G102700 Sobic001G102700 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic001G362200--Sobic002G134600 Sobic007G183900 Sobic007G183900 Sobic001G362200--Sobic007G183900 Sobic001G312900--Sobic001G362200 Sobic001G312900--Sobic003G109700 Sobic001G312900--Sobic002G134600 Sobic004G004300 Sobic004G004300 Sobic001G312900--Sobic004G004300 Sobic001G312900--Sobic002G350600 Sobic006G280000 Sobic006G280000 Sobic001G312900--Sobic006G280000 Sobic009G042700 Sobic009G042700 Sobic001G312900--Sobic009G042700 Sobic006G052500 Sobic006G052500 Sobic001G312900--Sobic006G052500 Sobic003G331400 Sobic003G331400 Sobic001G312900--Sobic003G331400 Sobic003G035100--Sobic003G309200 Sobic003G035100--Sobic002G134600 Sobic003G035100--Sobic003G372800 Sobic010G068500 Sobic010G068500 Sobic003G035100--Sobic010G068500 Sobic001G154500 Sobic001G154500 Sobic003G035100--Sobic001G154500 Sobic001G110900 Sobic001G110900 Sobic003G035100--Sobic001G110900 Sobic003G035100--Sobic009G233300 Sobic001G262700 Sobic001G262700 Sobic003G035100--Sobic001G262700 Sobic003G035100--Sobic001G387600 Sobic002G350600--Sobic006G280000 Sobic008G135200 Sobic008G135200 Sobic002G350600--Sobic008G135200 Sobic001G251100 Sobic001G251100 Sobic002G350600--Sobic001G251100 Sobic007G054800 Sobic007G054800 Sobic002G350600--Sobic007G054800 Sobic003G104000 Sobic003G104000 Sobic002G350600--Sobic003G104000 Sobic004G040900 Sobic004G040900 Sobic002G350600--Sobic004G040900 Sobic002G350600--Sobic001G312900 Sobic002G350600--Sobic002G294800 Sobic002G350600--Sobic001G362200 Sobic007G037301 Sobic007G037301 Sobic002G110300--Sobic007G037301 Sobic001G095500 Sobic001G095500 Sobic002G110300--Sobic001G095500 Sobic009G183000 Sobic009G183000 Sobic002G110300--Sobic009G183000 Sobic010G089100 Sobic010G089100 Sobic002G110300--Sobic010G089100 Sobic001G083800 Sobic001G083800 Sobic002G110300--Sobic001G083800 Sobic004G226600 Sobic004G226600 Sobic002G110300--Sobic004G226600 Sobic003G119800 Sobic003G119800 Sobic002G110300--Sobic003G119800 Sobic002G110300--Sobic007G006900 Sobic002G110300--Sobic002G134600
Octagon: transcription factors


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