Gene annotation
Transcriptome id Sobic.003G031800.1
Synonym AtIDD7, Sb03g002960, IDD7
Functional annotation ZOS1-04 - C2H2 zinc finger protein, expressed
UniProt C5XLW5
Pfam -
Panther DB PTHR10593 PTHR10593:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13810 : indeterminate(ID)-domain 11
RAP-DB (Rice) LOC_Os01g09850.1 : ZOS1-04 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a010195 , Zm00025a036023 , Zm00025a023015 , Zm00025a056789 , Zm00025a005649 , Zm00025a026121 , Zm00025a028450 , Zm00025a021475 , Zm00025a047929 , Zm00025a035820 , Zm00025a038400 , Zm00025a001203
Brachypodium KQK08378 , KQJ91417 , KQJ91416 , KQK14738 , KQK14739 , KQK14737 , KQK23107 , PNT74594 , PNT74593 , PNT74592 , PNT74591 , KQJ91415 , KQJ84077 , KQJ84076 , KQK14747 , KQK14746 , KQK14745 , KQK14744 , KQK14743 , KQK14742 , KQK14741 , KQK14740 , KQK03537 , KQK14749 , KQK14748 , PNT68255 , KQK03154 , KQJ98590 , KQK00679
Barley HORVU4Hr1G070950.7 , HORVU4Hr1G070950.6 , HORVU4Hr1G070950.4 , HORVU4Hr1G070950.3 , HORVU4Hr1G070950.2 , HORVU4Hr1G070950.1 , HORVU4Hr1G070950.9 , HORVU4Hr1G070950.8 , HORVU3Hr1G049810.5 , HORVU3Hr1G049810.4 , HORVU3Hr1G049810.7 , HORVU3Hr1G049810.6 , HORVU3Hr1G049810.3 , HORVU3Hr1G049810.2 , HORVU4Hr1G070950.13 , HORVU4Hr1G070950.12 , HORVU4Hr1G070950.11 , HORVU4Hr1G070950.10
Wheat TraesCS3B02G237700 , TraesCS2B02G421100 , TraesCS5D02G364900 , TraesCS5D02G364900 , TraesCS4B02G262400 , TraesCS3D02G107300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS3A02G205800 , TraesCS3B02G497200 , TraesCS3A02G105100 , TraesCS3B02G123600 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS5A02G356100 , TraesCS6D02G116300 , TraesCS4A02G041400 , TraesCS2A02G403200 , TraesCS2A02G403200 , TraesCS3D02G449900 , TraesCS3A02G170700 , TraesCS6A02G254500 , TraesCS6D02G235800 , TraesCS5B02G358600 , TraesCS6D02G235800 , TraesCS4D02G262500 , TraesCS3D02G209800
Populus -


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cDNA sequences
Sobic.003G031800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G372800 expressed protein -
2 Sobic.006G220300 - -
3 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.004G257350 - -
5 Sobic.002G110300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@UBX domain-containing protein, putative, expressed -
6 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
7 Sobic.001G127200 zinc finger family protein, putative, expressed -
8 Sobic.010G072500 - -
9 Sobic.005G209500 expressed protein -
10 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G298600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
12 Sobic.001G083800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclic nucleotide-gated ion channel 2, putative, expressed K05391: cyclic nucleotide gated channel, plant
13 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
14 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
15 Sobic.003G149800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
16 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
17 Sobic.004G337500 GATA zinc finger domain containing protein, expressed -
18 Sobic.001G312900 transporter family protein, putative, expressed -
19 Sobic.002G229600 - -
20 Sobic.003G229000 cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic003G031800 Sobic003G031800 Sobic003G372800 Sobic003G372800 Sobic003G031800--Sobic003G372800 Sobic006G220300 Sobic006G220300 Sobic003G031800--Sobic006G220300 Sobic010G260300 Sobic010G260300 Sobic003G031800--Sobic010G260300 Sobic004G257350 Sobic004G257350 Sobic003G031800--Sobic004G257350 Sobic002G110300 Sobic002G110300 Sobic003G031800--Sobic002G110300 Sobic002G134600 Sobic002G134600 Sobic003G031800--Sobic002G134600 Sobic001G127200 Sobic001G127200 Sobic003G031800--Sobic001G127200 Sobic010G072500 Sobic010G072500 Sobic003G031800--Sobic010G072500 Sobic005G209500 Sobic005G209500 Sobic003G031800--Sobic005G209500 Sobic006G184500 Sobic006G184500 Sobic003G372800--Sobic006G184500 Sobic003G109700 Sobic003G109700 Sobic003G372800--Sobic003G109700 Sobic003G372800--Sobic002G134600 Sobic003G372800--Sobic003G031800 Sobic001G362200 Sobic001G362200 Sobic003G372800--Sobic001G362200 Sobic001G312900 Sobic001G312900 Sobic003G372800--Sobic001G312900 Sobic003G035100 Sobic003G035100 Sobic003G372800--Sobic003G035100 Sobic002G350600 Sobic002G350600 Sobic003G372800--Sobic002G350600 Sobic003G372800--Sobic002G110300 Sobic006G220200 Sobic006G220200 Sobic006G220300--Sobic006G220200 Sobic001G110900 Sobic001G110900 Sobic006G220300--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220300--Sobic009G155700 Sobic002G216400 Sobic002G216400 Sobic006G220300--Sobic002G216400 Sobic001G087700 Sobic001G087700 Sobic006G220300--Sobic001G087700 Sobic004G332100 Sobic004G332100 Sobic006G220300--Sobic004G332100 Sobic001G470900 Sobic001G470900 Sobic006G220300--Sobic001G470900 Sobic001G045600 Sobic001G045600 Sobic006G220300--Sobic001G045600 Sobic006G220300--Sobic010G260300 Sobic002G189000 Sobic002G189000 Sobic010G260300--Sobic002G189000 Sobic003G229000 Sobic003G229000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic007G025800 Sobic007G025800 Sobic010G260300--Sobic007G025800 Sobic002G271100 Sobic002G271100 Sobic010G260300--Sobic002G271100 Sobic003G225900 Sobic003G225900 Sobic010G260300--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic010G260300--Sobic004G155150 Sobic003G233900 Sobic003G233900 Sobic010G260300--Sobic003G233900 Sobic003G198150 Sobic003G198150 Sobic010G260300--Sobic003G198150 Sobic004G257350--Sobic003G233900 Sobic004G310600 Sobic004G310600 Sobic004G257350--Sobic004G310600 Sobic009G000700 Sobic009G000700 Sobic004G257350--Sobic009G000700 Sobic004G257350--Sobic004G155150 Sobic003G040800 Sobic003G040800 Sobic004G257350--Sobic003G040800 Sobic003G227600 Sobic003G227600 Sobic004G257350--Sobic003G227600 Sobic009G128300 Sobic009G128300 Sobic004G257350--Sobic009G128300 Sobic003G066900 Sobic003G066900 Sobic004G257350--Sobic003G066900 Sobic003G078501 Sobic003G078501 Sobic004G257350--Sobic003G078501 Sobic007G037301 Sobic007G037301 Sobic002G110300--Sobic007G037301 Sobic001G095500 Sobic001G095500 Sobic002G110300--Sobic001G095500 Sobic002G110300--Sobic009G183000 Sobic010G089100 Sobic010G089100 Sobic002G110300--Sobic010G089100 Sobic001G083800 Sobic001G083800 Sobic002G110300--Sobic001G083800 Sobic004G226600 Sobic004G226600 Sobic002G110300--Sobic004G226600 Sobic003G119800 Sobic003G119800 Sobic002G110300--Sobic003G119800 Sobic007G006900 Sobic007G006900 Sobic002G110300--Sobic007G006900 Sobic002G110300--Sobic002G134600 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic004G261600 Sobic004G261600 Sobic001G127200--Sobic004G261600 Sobic003G104000 Sobic003G104000 Sobic001G127200--Sobic003G104000 Sobic001G415300 Sobic001G415300 Sobic001G127200--Sobic001G415300 Sobic010G004100 Sobic010G004100 Sobic001G127200--Sobic010G004100 Sobic002G031100 Sobic002G031100 Sobic001G127200--Sobic002G031100 Sobic002G137400 Sobic002G137400 Sobic001G127200--Sobic002G137400 Sobic004G344901 Sobic004G344901 Sobic001G127200--Sobic004G344901 Sobic004G358400 Sobic004G358400 Sobic001G127200--Sobic004G358400 Sobic003G227100 Sobic003G227100 Sobic001G127200--Sobic003G227100 Sobic002G119700 Sobic002G119700 Sobic010G072500--Sobic002G119700 Sobic001G034300 Sobic001G034300 Sobic010G072500--Sobic001G034300 Sobic001G251200 Sobic001G251200 Sobic010G072500--Sobic001G251200 Sobic005G087900 Sobic005G087900 Sobic010G072500--Sobic005G087900 Sobic004G004300 Sobic004G004300 Sobic010G072500--Sobic004G004300 Sobic001G128300 Sobic001G128300 Sobic010G072500--Sobic001G128300 Sobic010G072500--Sobic001G312900 Sobic007G203300 Sobic007G203300 Sobic010G072500--Sobic007G203300 Sobic007G056600 Sobic007G056600 Sobic010G072500--Sobic007G056600 Sobic005G209500--Sobic003G229000 Sobic005G209500--Sobic010G260300 Sobic005G209500--Sobic001G110900 Sobic003G272400 Sobic003G272400 Sobic005G209500--Sobic003G272400 Sobic010G140500 Sobic010G140500 Sobic005G209500--Sobic010G140500 Sobic005G209500--Sobic002G189000 Sobic005G209500--Sobic007G025800 Sobic001G236400 Sobic001G236400 Sobic005G209500--Sobic001G236400 Sobic003G252400 Sobic003G252400 Sobic005G209500--Sobic003G252400
Octagon: transcription factors


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