Gene annotation
Transcriptome id Sobic.002G229600.1
Synonym
Functional annotation -
UniProt A0A1B6QCZ5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G229600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G252400 drought induced 19 protein, putative, expressed -
2 Sobic.004G211301 - -
3 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
4 Sobic.003G397500 expressed protein -
5 Sobic.003G066900 expressed protein -
6 Sobic.004G257350 - -
7 Sobic.003G233900 - -
8 Sobic.002G331450 - -
9 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
10 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
12 Sobic.005G087900 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
13 Sobic.008G031300 nucleotidyltransferase, putative, expressed -
14 Sobic.009G128300 CUE domain containing protein, expressed -
15 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.003G229000 cytochrome P450 72A1, putative, expressed -
17 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
18 Sobic.009G195800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
19 Sobic.004G155150 - -
20 Sobic.005G060600 - -


Gene co-expression network
sample Sobic002G229600 Sobic002G229600 Sobic003G252400 Sobic003G252400 Sobic002G229600--Sobic003G252400 Sobic004G211301 Sobic004G211301 Sobic002G229600--Sobic004G211301 Sobic002G013900 Sobic002G013900 Sobic002G229600--Sobic002G013900 Sobic003G397500 Sobic003G397500 Sobic002G229600--Sobic003G397500 Sobic003G066900 Sobic003G066900 Sobic002G229600--Sobic003G066900 Sobic004G257350 Sobic004G257350 Sobic002G229600--Sobic004G257350 Sobic003G233900 Sobic003G233900 Sobic002G229600--Sobic003G233900 Sobic002G331450 Sobic002G331450 Sobic002G229600--Sobic002G331450 Sobic002G189000 Sobic002G189000 Sobic002G229600--Sobic002G189000 Sobic003G252400--Sobic002G331450 Sobic003G252400--Sobic004G211301 Sobic003G252400--Sobic003G397500 Sobic002G110200 Sobic002G110200 Sobic003G252400--Sobic002G110200 Sobic010G085400 Sobic010G085400 Sobic003G252400--Sobic010G085400 Sobic005G060600 Sobic005G060600 Sobic003G252400--Sobic005G060600 Sobic003G252400--Sobic002G013900 Sobic002G325600 Sobic002G325600 Sobic003G252400--Sobic002G325600 Sobic007G131700 Sobic007G131700 Sobic003G252400--Sobic007G131700 Sobic004G211301--Sobic002G331450 Sobic009G128300 Sobic009G128300 Sobic004G211301--Sobic009G128300 Sobic004G211301--Sobic003G252400 Sobic004G211301--Sobic010G085400 Sobic004G211301--Sobic005G060600 Sobic002G182800 Sobic002G182800 Sobic004G211301--Sobic002G182800 Sobic004G211301--Sobic003G233900 Sobic004G211301--Sobic002G110200 Sobic004G211301--Sobic002G013900 Sobic002G013900--Sobic003G233900 Sobic002G013900--Sobic009G128300 Sobic002G013900--Sobic002G110200 Sobic002G013900--Sobic002G189000 Sobic002G013900--Sobic002G182800 Sobic002G013900--Sobic002G331450 Sobic003G227600 Sobic003G227600 Sobic002G013900--Sobic003G227600 Sobic002G013900--Sobic010G085400 Sobic003G040800 Sobic003G040800 Sobic002G013900--Sobic003G040800 Sobic003G397500--Sobic003G252400 Sobic008G075600 Sobic008G075600 Sobic003G397500--Sobic008G075600 Sobic003G397500--Sobic004G211301 Sobic003G397500--Sobic002G331450 Sobic010G026500 Sobic010G026500 Sobic003G397500--Sobic010G026500 Sobic003G397500--Sobic002G110200 Sobic003G397500--Sobic002G229600 Sobic008G031300 Sobic008G031300 Sobic003G397500--Sobic008G031300 Sobic003G397500--Sobic010G085400 Sobic003G066900--Sobic003G233900 Sobic008G044750 Sobic008G044750 Sobic003G066900--Sobic008G044750 Sobic003G066900--Sobic009G128300 Sobic009G000700 Sobic009G000700 Sobic003G066900--Sobic009G000700 Sobic004G310600 Sobic004G310600 Sobic003G066900--Sobic004G310600 Sobic004G285100 Sobic004G285100 Sobic003G066900--Sobic004G285100 Sobic001G509400 Sobic001G509400 Sobic003G066900--Sobic001G509400 Sobic004G155150 Sobic004G155150 Sobic003G066900--Sobic004G155150 Sobic003G066900--Sobic004G257350 Sobic004G257350--Sobic003G233900 Sobic004G257350--Sobic004G310600 Sobic004G257350--Sobic009G000700 Sobic004G257350--Sobic004G155150 Sobic004G257350--Sobic003G040800 Sobic004G257350--Sobic003G227600 Sobic004G257350--Sobic009G128300 Sobic004G257350--Sobic003G066900 Sobic003G078501 Sobic003G078501 Sobic004G257350--Sobic003G078501 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic003G233900--Sobic009G000700 Sobic009G216900 Sobic009G216900 Sobic003G233900--Sobic009G216900 Sobic003G233900--Sobic004G257350 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic007G169600 Sobic007G169600 Sobic002G331450--Sobic007G169600 Sobic001G075101 Sobic001G075101 Sobic002G331450--Sobic001G075101 Sobic002G331450--Sobic002G325600 Sobic003G083000 Sobic003G083000 Sobic002G331450--Sobic003G083000 Sobic002G331450--Sobic002G110200 Sobic006G203000 Sobic006G203000 Sobic002G331450--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic002G331450--Sobic002G037400 Sobic002G331450--Sobic009G128300 Sobic002G331450--Sobic002G182800 Sobic002G189000--Sobic002G013900 Sobic002G189000--Sobic003G233900 Sobic002G271100 Sobic002G271100 Sobic002G189000--Sobic002G271100 Sobic010G260300 Sobic010G260300 Sobic002G189000--Sobic010G260300 Sobic002G189000--Sobic009G128300 Sobic002G189000--Sobic002G110200 Sobic003G225900 Sobic003G225900 Sobic002G189000--Sobic003G225900 Sobic002G189000--Sobic004G155150 Sobic002G189000--Sobic004G285100
Octagon: transcription factors


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