Gene annotation
Transcriptome id Sobic.008G031300.1
Synonym Sb08g002707
Functional annotation nucleotidyltransferase, putative, expressed
UniProt A0A1B6PBG1
Pfam PF01909
Panther DB PTHR23092 PTHR23092:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016779; nucleotidyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G51620 : PAP/OAS1 substrate-binding domain superfamily
RAP-DB (Rice) LOC_Os12g02260.1 : nucleotidyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a033303 , Zm00025a029021
Brachypodium KQJ92508 , KQJ89463
Barley HORVU5Hr1G046560.10 , HORVU5Hr1G046560.11 , HORVU5Hr1G046560.12 , HORVU5Hr1G046560.13 , HORVU5Hr1G046560.14 , HORVU5Hr1G046560.15 , HORVU5Hr1G046560.16 , HORVU5Hr1G046560.17 , HORVU5Hr1G046560.18 , HORVU5Hr1G046560.19 , HORVU4Hr1G022680.8 , HORVU4Hr1G022680.1 , HORVU4Hr1G022680.2 , HORVU4Hr1G022680.4 , HORVU5Hr1G046560.2 , HORVU5Hr1G046560.3 , HORVU5Hr1G046560.1 , HORVU5Hr1G046560.6 , HORVU5Hr1G046560.7 , HORVU5Hr1G046560.4 , HORVU5Hr1G046560.5 , HORVU5Hr1G046560.8 , HORVU5Hr1G046560.9 , HORVU5Hr1G046560.25 , HORVU5Hr1G046560.24 , HORVU5Hr1G046560.27 , HORVU5Hr1G046560.26 , HORVU5Hr1G046560.21 , HORVU5Hr1G046560.20 , HORVU5Hr1G046560.23 , HORVU5Hr1G046560.22 , HORVU4Hr1G022680.12 , HORVU4Hr1G022680.13 , HORVU4Hr1G022680.10 , HORVU4Hr1G022680.11 , HORVU4Hr1G022680.14 , HORVU4Hr1G022680.15
Wheat TraesCS4A02G194700 , TraesCS5A02G147600 , TraesCS5A02G147600 , TraesCS4B02G120600 , TraesCS4B02G120600 , TraesCS4B02G120600 , TraesCS4D02G118600 , TraesCS5A02G147600 , TraesCS5B02G146200 , TraesCS5B02G146200 , TraesCS5B02G146200 , TraesCS5D02G145000 , TraesCS5D02G145000 , TraesCS5D02G145000 , TraesCS5D02G145000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G509400 - -
2 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
3 Sobic.008G044750 - -
4 Sobic.004G211301 - -
5 Sobic.009G128300 CUE domain containing protein, expressed -
6 Sobic.002G331450 - -
7 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
8 Sobic.003G066900 expressed protein -
9 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
10 Sobic.003G397500 expressed protein -
11 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
12 Sobic.003G198150 - -
13 Sobic.003G252400 drought induced 19 protein, putative, expressed -
14 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
15 Sobic.003G233900 - -
16 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
18 Sobic.001G140200 Homeobox domain containing protein, expressed -
19 Sobic.002G182800 expressed protein -
20 Sobic.002G342100 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic008G031300 Sobic008G031300 Sobic001G509400 Sobic001G509400 Sobic008G031300--Sobic001G509400 Sobic001G112000 Sobic001G112000 Sobic008G031300--Sobic001G112000 Sobic008G044750 Sobic008G044750 Sobic008G031300--Sobic008G044750 Sobic004G211301 Sobic004G211301 Sobic008G031300--Sobic004G211301 Sobic009G128300 Sobic009G128300 Sobic008G031300--Sobic009G128300 Sobic002G331450 Sobic002G331450 Sobic008G031300--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic008G031300--Sobic002G325600 Sobic003G066900 Sobic003G066900 Sobic008G031300--Sobic003G066900 Sobic010G085400 Sobic010G085400 Sobic008G031300--Sobic010G085400 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic001G509400--Sobic002G182800 Sobic001G075101 Sobic001G075101 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic001G509400--Sobic002G325600 Sobic003G079800 Sobic003G079800 Sobic001G509400--Sobic003G079800 Sobic007G169600 Sobic007G169600 Sobic001G509400--Sobic007G169600 Sobic003G227600 Sobic003G227600 Sobic001G509400--Sobic003G227600 Sobic002G342100 Sobic002G342100 Sobic001G112000--Sobic002G342100 Sobic001G112000--Sobic009G128300 Sobic001G112000--Sobic008G031300 Sobic001G112000--Sobic003G227600 Sobic001G112000--Sobic004G211301 Sobic001G112000--Sobic001G509400 Sobic001G112000--Sobic002G331450 Sobic001G112000--Sobic002G182800 Sobic005G096700 Sobic005G096700 Sobic001G112000--Sobic005G096700 Sobic008G044750--Sobic001G509400 Sobic008G044750--Sobic009G128300 Sobic008G044750--Sobic003G079800 Sobic008G044750--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic008G044750--Sobic003G233900 Sobic008G044750--Sobic003G227600 Sobic003G198150 Sobic003G198150 Sobic008G044750--Sobic003G198150 Sobic008G044750--Sobic003G066900 Sobic008G044750--Sobic001G075101 Sobic004G211301--Sobic002G331450 Sobic004G211301--Sobic009G128300 Sobic003G252400 Sobic003G252400 Sobic004G211301--Sobic003G252400 Sobic004G211301--Sobic010G085400 Sobic005G060600 Sobic005G060600 Sobic004G211301--Sobic005G060600 Sobic004G211301--Sobic002G182800 Sobic004G211301--Sobic003G233900 Sobic002G110200 Sobic002G110200 Sobic004G211301--Sobic002G110200 Sobic002G013900 Sobic002G013900 Sobic004G211301--Sobic002G013900 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic009G128300--Sobic008G044750 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic002G331450--Sobic007G169600 Sobic002G331450--Sobic001G075101 Sobic002G331450--Sobic002G325600 Sobic003G083000 Sobic003G083000 Sobic002G331450--Sobic003G083000 Sobic002G331450--Sobic002G110200 Sobic006G203000 Sobic006G203000 Sobic002G331450--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic002G331450--Sobic002G037400 Sobic002G331450--Sobic009G128300 Sobic002G331450--Sobic002G182800 Sobic002G325600--Sobic007G169600 Sobic002G325600--Sobic002G331450 Sobic002G325600--Sobic001G075101 Sobic002G325600--Sobic003G083000 Sobic002G325600--Sobic006G203000 Sobic002G325600--Sobic002G037400 Sobic002G325600--Sobic001G509400 Sobic005G016900 Sobic005G016900 Sobic002G325600--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic002G325600--Sobic007G143100 Sobic003G066900--Sobic003G233900 Sobic003G066900--Sobic008G044750 Sobic003G066900--Sobic009G128300 Sobic009G000700 Sobic009G000700 Sobic003G066900--Sobic009G000700 Sobic004G310600 Sobic004G310600 Sobic003G066900--Sobic004G310600 Sobic004G285100 Sobic004G285100 Sobic003G066900--Sobic004G285100 Sobic003G066900--Sobic001G509400 Sobic004G155150 Sobic004G155150 Sobic003G066900--Sobic004G155150 Sobic004G257350 Sobic004G257350 Sobic003G066900--Sobic004G257350 Sobic010G085400--Sobic002G182800 Sobic010G085400--Sobic002G331450 Sobic010G085400--Sobic009G128300 Sobic003G040800 Sobic003G040800 Sobic010G085400--Sobic003G040800 Sobic010G085400--Sobic002G110200 Sobic010G085400--Sobic002G013900 Sobic010G085400--Sobic004G211301 Sobic010G085400--Sobic003G233900 Sobic010G085400--Sobic007G169600
Octagon: transcription factors


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