Gene annotation
Transcriptome id Sobic.001G140200.1
Synonym BP, KNAT1, Sb01g012200, BP1
Functional annotation Homeobox domain containing protein, expressed
UniProt C5WPQ5
Pfam PF03789 PF05920 PF03790 PF03791
Panther DB PTHR11850 PTHR11850:SF106
NCBI CDD KOG0773; Transcription factor MEIS1 and related HOX domain proteins
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT4G08150 : KNOTTED-like from Arabidopsis thaliana
RAP-DB (Rice) LOC_Os07g03770.1 : Homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007979 , Zm00025a008357 , Zm00025a024290 , Zm00025a038168 , Zm00025a044961 , Zm00025a007981 , Zm00025a000323 , Zm00025a007492 , Zm00025a040695 , Zm00025a017126 , Zm00025a016198
Brachypodium KQK04078 , KQK13818 , KQK13819 , KQK20926 , PNT74062 , PNT74065 , PNT74064 , PNT74063 , KQK07913 , KQK13423 , KQK13422
Barley HORVU7Hr1G114650.6 , HORVU7Hr1G114650.4 , HORVU7Hr1G114650.5 , HORVU7Hr1G114650.2 , HORVU7Hr1G114650.3 , HORVU7Hr1G114650.1 , HORVU5Hr1G098570.2 , HORVU5Hr1G098570.6 , HORVU5Hr1G098570.7 , HORVU5Hr1G098570.4 , HORVU5Hr1G098570.8 , HORVU5Hr1G098570.9 , HORVU4Hr1G003410.3 , HORVU4Hr1G009730.9 , HORVU4Hr1G009730.5 , HORVU4Hr1G003410.1 , HORVU4Hr1G003410.2 , HORVU4Hr1G003410.4 , HORVU4Hr1G003410.5 , HORVU4Hr1G003410.6 , HORVU4Hr1G003410.7 , HORVU4Hr1G003410.8 , HORVU4Hr1G009730.12 , HORVU4Hr1G009730.11 , HORVU4Hr1G009730.10 , HORVU5Hr1G098570.10 , HORVU5Hr1G098570.11 , HORVU1Hr1G015720.12 , HORVU1Hr1G015720.10 , HORVU1Hr1G015720.11 , HORVU4Hr1G009730.3 , HORVU4Hr1G009730.2 , HORVU1Hr1G015720.1 , HORVU1Hr1G015720.2 , HORVU1Hr1G015720.3 , HORVU1Hr1G015720.4 , HORVU1Hr1G015720.5 , HORVU1Hr1G015720.6 , HORVU1Hr1G015720.7 , HORVU1Hr1G015720.8 , HORVU1Hr1G015720.9 , HORVU5Hr1G098570.3 , HORVU5Hr1G098570.1 , HORVU5Hr1G098570.5 , HORVU4Hr1G009730.1 , HORVU4Hr1G003360.4 , HORVU4Hr1G003360.2 , HORVU4Hr1G003360.3 , HORVU4Hr1G003360.1
Wheat TraesCS7B02G423100 , TraesCS1A02G072800 , TraesCS5A02G405900 , TraesCS4A02G292200 , TraesCS4B02G057900 , TraesCS7D02G501000 , TraesCS7D02G501000 , TraesCS4D02G019800 , TraesCS5B02G410600 , TraesCS7B02G423100 , TraesCS7B02G423100 , TraesCS1B02G135600 , TraesCS1B02G135600 , TraesCS1D02G075700 , TraesCS4A02G291900 , TraesCS4D02G058000 , TraesCS4A02G292200 , TraesCS4D02G019600 , TraesCS4D02G019600 , TraesCS1B02G091700 , TraesCS4D02G019900 , TraesCS4A02G256700 , TraesCS5B02G454600 , TraesCS5D02G415900 , TraesCS4A02G292100 , TraesCS4B02G021900 , TraesCS4B02G021900 , TraesCS4B02G021900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
2 Sobic.008G052500 receptor-like kinase, putative, expressed -
3 Sobic.001G509400 - -
4 Sobic.008G044750 - -
5 Sobic.008G065400 - -
6 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
7 Sobic.001G075101 - -
8 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
9 Sobic.005G079700 expressed protein -
10 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.003G198150 - -
12 Sobic.002G331450 - -
13 Sobic.002G079801 - -
14 Sobic.009G128300 CUE domain containing protein, expressed -
15 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
16 Sobic.002G182800 expressed protein -
17 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
18 Sobic.005G016900 CRP11 - Cysteine-rich family protein precursor, expressed -
19 Sobic.001G278600 - -
20 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase


Gene co-expression network
sample Sobic001G140200 Sobic001G140200 Sobic010G054500 Sobic010G054500 Sobic001G140200--Sobic010G054500 Sobic008G052500 Sobic008G052500 Sobic001G140200--Sobic008G052500 Sobic001G509400 Sobic001G509400 Sobic001G140200--Sobic001G509400 Sobic008G044750 Sobic008G044750 Sobic001G140200--Sobic008G044750 Sobic008G065400 Sobic008G065400 Sobic001G140200--Sobic008G065400 Sobic002G325600 Sobic002G325600 Sobic001G140200--Sobic002G325600 Sobic001G075101 Sobic001G075101 Sobic001G140200--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic001G140200--Sobic007G169600 Sobic005G079700 Sobic005G079700 Sobic001G140200--Sobic005G079700 Sobic010G054500--Sobic008G052500 Sobic010G054500--Sobic001G140200 Sobic005G016900 Sobic005G016900 Sobic010G054500--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic010G054500--Sobic007G143100 Sobic007G073750 Sobic007G073750 Sobic010G054500--Sobic007G073750 Sobic007G143200 Sobic007G143200 Sobic010G054500--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic010G054500--Sobic009G076700 Sobic010G054500--Sobic007G169600 Sobic010G054500--Sobic002G325600 Sobic008G052500--Sobic010G054500 Sobic008G052500--Sobic001G140200 Sobic008G052500--Sobic002G325600 Sobic008G052500--Sobic005G016900 Sobic008G052500--Sobic007G143100 Sobic008G052500--Sobic001G509400 Sobic008G052500--Sobic007G169600 Sobic008G052500--Sobic001G075101 Sobic008G052500--Sobic007G143200 Sobic001G509400--Sobic008G044750 Sobic009G128300 Sobic009G128300 Sobic001G509400--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic001G509400--Sobic002G331450 Sobic001G509400--Sobic002G325600 Sobic003G079800 Sobic003G079800 Sobic001G509400--Sobic003G079800 Sobic001G509400--Sobic007G169600 Sobic003G227600 Sobic003G227600 Sobic001G509400--Sobic003G227600 Sobic008G044750--Sobic001G509400 Sobic008G044750--Sobic009G128300 Sobic008G044750--Sobic003G079800 Sobic008G044750--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic008G044750--Sobic003G233900 Sobic008G044750--Sobic003G227600 Sobic003G198150 Sobic003G198150 Sobic008G044750--Sobic003G198150 Sobic003G066900 Sobic003G066900 Sobic008G044750--Sobic003G066900 Sobic008G044750--Sobic001G075101 Sobic001G278600 Sobic001G278600 Sobic008G065400--Sobic001G278600 Sobic002G431200 Sobic002G431200 Sobic008G065400--Sobic002G431200 Sobic003G366850 Sobic003G366850 Sobic008G065400--Sobic003G366850 Sobic003G374500 Sobic003G374500 Sobic008G065400--Sobic003G374500 Sobic008G065400--Sobic005G079700 Sobic003G266700 Sobic003G266700 Sobic008G065400--Sobic003G266700 Sobic008G106400 Sobic008G106400 Sobic008G065400--Sobic008G106400 Sobic002G171400 Sobic002G171400 Sobic008G065400--Sobic002G171400 Sobic003G429500 Sobic003G429500 Sobic008G065400--Sobic003G429500 Sobic002G325600--Sobic007G169600 Sobic002G325600--Sobic002G331450 Sobic002G325600--Sobic001G075101 Sobic003G083000 Sobic003G083000 Sobic002G325600--Sobic003G083000 Sobic006G203000 Sobic006G203000 Sobic002G325600--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic002G325600--Sobic002G037400 Sobic002G325600--Sobic001G509400 Sobic002G325600--Sobic005G016900 Sobic002G325600--Sobic007G143100 Sobic001G075101--Sobic007G169600 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G075101--Sobic001G509400 Sobic001G075101--Sobic002G182800 Sobic007G169600--Sobic001G075101 Sobic007G169600--Sobic003G083000 Sobic007G169600--Sobic002G331450 Sobic007G169600--Sobic002G037400 Sobic007G169600--Sobic006G203000 Sobic007G169600--Sobic005G016900 Sobic007G169600--Sobic007G143100 Sobic007G169600--Sobic002G325600 Sobic007G169600--Sobic007G143200 Sobic005G079700--Sobic008G065400 Sobic005G079700--Sobic008G106400 Sobic006G249200 Sobic006G249200 Sobic005G079700--Sobic006G249200 Sobic005G079700--Sobic002G431200 Sobic005G079700--Sobic001G140200 Sobic005G079700--Sobic003G374500 Sobic009G159300 Sobic009G159300 Sobic005G079700--Sobic009G159300 Sobic009G121750 Sobic009G121750 Sobic005G079700--Sobic009G121750 Sobic005G079700--Sobic008G044750
Octagon: transcription factors


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