Gene annotation
Transcriptome id Sobic.001G112000.1
Synonym
Functional annotation 3,4-dihydroxy-2-butanone kinase, putative, expressed
UniProt A0A1B6QIE5
Pfam PF02734 PF02733
Panther DB PTHR28629 PTHR28629:SF4
NCBI CDD -
KEGG Orthology K00863; DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
Gene Ontology GO:0006071; glycerol metabolic process GO:0004371glycerone kinase activity


Orthologs (automatic annotation)
TAIR AT3G17770 : Dihydroxyacetone kinase
RAP-DB (Rice) LOC_Os03g51000.2 : 3,4-dihydroxy-2-butanone kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G342100 no apical meristem protein, putative, expressed -
2 Sobic.009G128300 CUE domain containing protein, expressed -
3 Sobic.008G031300 nucleotidyltransferase, putative, expressed -
4 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
5 Sobic.004G211301 - -
6 Sobic.001G509400 - -
7 Sobic.002G331450 - -
8 Sobic.002G182800 expressed protein -
9 Sobic.005G096700 - -
10 Sobic.008G044750 - -
11 Sobic.003G233900 - -
12 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
14 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
15 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
16 Sobic.001G075101 - -
17 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
18 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
19 Sobic.003G066900 expressed protein -
20 Sobic.005G060600 - -


Gene co-expression network
sample Sobic001G112000 Sobic001G112000 Sobic002G342100 Sobic002G342100 Sobic001G112000--Sobic002G342100 Sobic009G128300 Sobic009G128300 Sobic001G112000--Sobic009G128300 Sobic008G031300 Sobic008G031300 Sobic001G112000--Sobic008G031300 Sobic003G227600 Sobic003G227600 Sobic001G112000--Sobic003G227600 Sobic004G211301 Sobic004G211301 Sobic001G112000--Sobic004G211301 Sobic001G509400 Sobic001G509400 Sobic001G112000--Sobic001G509400 Sobic002G331450 Sobic002G331450 Sobic001G112000--Sobic002G331450 Sobic002G182800 Sobic002G182800 Sobic001G112000--Sobic002G182800 Sobic005G096700 Sobic005G096700 Sobic001G112000--Sobic005G096700 Sobic002G342100--Sobic009G128300 Sobic001G075101 Sobic001G075101 Sobic002G342100--Sobic001G075101 Sobic002G342100--Sobic002G182800 Sobic002G342100--Sobic003G227600 Sobic002G342100--Sobic002G331450 Sobic007G169600 Sobic007G169600 Sobic002G342100--Sobic007G169600 Sobic003G083000 Sobic003G083000 Sobic002G342100--Sobic003G083000 Sobic007G153001 Sobic007G153001 Sobic002G342100--Sobic007G153001 Sobic002G037400 Sobic002G037400 Sobic002G342100--Sobic002G037400 Sobic009G128300--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic003G079800 Sobic003G079800 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic008G031300--Sobic001G509400 Sobic008G031300--Sobic001G112000 Sobic008G031300--Sobic008G044750 Sobic008G031300--Sobic004G211301 Sobic008G031300--Sobic009G128300 Sobic008G031300--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic008G031300--Sobic002G325600 Sobic003G066900 Sobic003G066900 Sobic008G031300--Sobic003G066900 Sobic010G085400 Sobic010G085400 Sobic008G031300--Sobic010G085400 Sobic003G227600--Sobic009G128300 Sobic009G216900 Sobic009G216900 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G040800 Sobic003G040800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic003G227600--Sobic001G075101 Sobic003G227600--Sobic002G331450 Sobic004G211301--Sobic002G331450 Sobic004G211301--Sobic009G128300 Sobic003G252400 Sobic003G252400 Sobic004G211301--Sobic003G252400 Sobic004G211301--Sobic010G085400 Sobic005G060600 Sobic005G060600 Sobic004G211301--Sobic005G060600 Sobic004G211301--Sobic002G182800 Sobic004G211301--Sobic003G233900 Sobic002G110200 Sobic002G110200 Sobic004G211301--Sobic002G110200 Sobic002G013900 Sobic002G013900 Sobic004G211301--Sobic002G013900 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic001G509400--Sobic002G325600 Sobic001G509400--Sobic003G079800 Sobic001G509400--Sobic007G169600 Sobic001G509400--Sobic003G227600 Sobic002G331450--Sobic007G169600 Sobic002G331450--Sobic001G075101 Sobic002G331450--Sobic002G325600 Sobic002G331450--Sobic003G083000 Sobic002G331450--Sobic002G110200 Sobic006G203000 Sobic006G203000 Sobic002G331450--Sobic006G203000 Sobic002G331450--Sobic002G037400 Sobic002G331450--Sobic009G128300 Sobic002G331450--Sobic002G182800 Sobic002G182800--Sobic009G128300 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic002G182800--Sobic001G075101 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic002G182800--Sobic003G040800 Sobic002G182800--Sobic010G085400 Sobic002G182800--Sobic002G342100 Sobic005G096700--Sobic001G112000 Sobic009G183000 Sobic009G183000 Sobic005G096700--Sobic009G183000 Sobic002G110300 Sobic002G110300 Sobic005G096700--Sobic002G110300 Sobic005G096700--Sobic008G031300 Sobic002G079801 Sobic002G079801 Sobic005G096700--Sobic002G079801 Sobic006G199700 Sobic006G199700 Sobic005G096700--Sobic006G199700 Sobic006G251000 Sobic006G251000 Sobic005G096700--Sobic006G251000 Sobic001G095500 Sobic001G095500 Sobic005G096700--Sobic001G095500 Sobic006G174975 Sobic006G174975 Sobic005G096700--Sobic006G174975
Octagon: transcription factors


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