Gene annotation
Transcriptome id Sobic.006G220300.1
Synonym
Functional annotation -
UniProt A0A1B6PNA4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.006G220300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
2 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.009G155700 - -
4 Sobic.002G216400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.001G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
6 Sobic.004G332100 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G470900 sulfate transporter, putative, expressed K17469: sulfate transporter 2, low-affinity
8 Sobic.001G045600 remorin, putative, expressed -
9 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G083800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclic nucleotide-gated ion channel 2, putative, expressed K05391: cyclic nucleotide gated channel, plant
11 Sobic.001G095750 - -
12 Sobic.003G031800 ZOS1-04 - C2H2 zinc finger protein, expressed -
13 Sobic.002G086800 expressed protein -
14 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
15 Sobic.005G209500 expressed protein -
16 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
17 Sobic.001G391300 "Expressed in drought, cold and heat"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
18 Sobic.010G092600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
19 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
20 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase


Gene co-expression network
sample Sobic006G220300 Sobic006G220300 Sobic006G220200 Sobic006G220200 Sobic006G220300--Sobic006G220200 Sobic001G110900 Sobic001G110900 Sobic006G220300--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220300--Sobic009G155700 Sobic002G216400 Sobic002G216400 Sobic006G220300--Sobic002G216400 Sobic001G087700 Sobic001G087700 Sobic006G220300--Sobic001G087700 Sobic004G332100 Sobic004G332100 Sobic006G220300--Sobic004G332100 Sobic001G470900 Sobic001G470900 Sobic006G220300--Sobic001G470900 Sobic001G045600 Sobic001G045600 Sobic006G220300--Sobic001G045600 Sobic010G260300 Sobic010G260300 Sobic006G220300--Sobic010G260300 Sobic006G220200--Sobic006G220300 Sobic010G092600 Sobic010G092600 Sobic006G220200--Sobic010G092600 Sobic001G391300 Sobic001G391300 Sobic006G220200--Sobic001G391300 Sobic002G148700 Sobic002G148700 Sobic006G220200--Sobic002G148700 Sobic006G220200--Sobic002G216400 Sobic001G496300 Sobic001G496300 Sobic006G220200--Sobic001G496300 Sobic003G238000 Sobic003G238000 Sobic006G220200--Sobic003G238000 Sobic006G220200--Sobic001G110900 Sobic006G220200--Sobic009G155700 Sobic001G110900--Sobic006G220300 Sobic003G272400 Sobic003G272400 Sobic001G110900--Sobic003G272400 Sobic001G140200 Sobic001G140200 Sobic001G110900--Sobic001G140200 Sobic003G198150 Sobic003G198150 Sobic001G110900--Sobic003G198150 Sobic010G233450 Sobic010G233450 Sobic001G110900--Sobic010G233450 Sobic002G110200 Sobic002G110200 Sobic001G110900--Sobic002G110200 Sobic001G509400 Sobic001G509400 Sobic001G110900--Sobic001G509400 Sobic002G013900 Sobic002G013900 Sobic001G110900--Sobic002G013900 Sobic005G209500 Sobic005G209500 Sobic001G110900--Sobic005G209500 Sobic009G155700--Sobic006G220300 Sobic009G155700--Sobic010G092600 Sobic009G155700--Sobic006G220200 Sobic009G155700--Sobic001G087700 Sobic009G155700--Sobic001G391300 Sobic009G155700--Sobic001G045600 Sobic009G155700--Sobic001G110900 Sobic002G387200 Sobic002G387200 Sobic009G155700--Sobic002G387200 Sobic008G171000 Sobic008G171000 Sobic009G155700--Sobic008G171000 Sobic002G216400--Sobic001G110900 Sobic001G095750 Sobic001G095750 Sobic002G216400--Sobic001G095750 Sobic002G216400--Sobic006G220300 Sobic002G216400--Sobic002G013900 Sobic003G131500 Sobic003G131500 Sobic002G216400--Sobic003G131500 Sobic006G114200 Sobic006G114200 Sobic002G216400--Sobic006G114200 Sobic006G203000 Sobic006G203000 Sobic002G216400--Sobic006G203000 Sobic002G216400--Sobic002G110200 Sobic003G234800 Sobic003G234800 Sobic002G216400--Sobic003G234800 Sobic001G087700--Sobic001G470900 Sobic002G086800 Sobic002G086800 Sobic001G087700--Sobic002G086800 Sobic001G087700--Sobic001G110900 Sobic001G087700--Sobic001G391300 Sobic001G087700--Sobic006G220300 Sobic007G160200 Sobic007G160200 Sobic001G087700--Sobic007G160200 Sobic003G389700 Sobic003G389700 Sobic001G087700--Sobic003G389700 Sobic001G087700--Sobic010G092600 Sobic001G087700--Sobic004G332100 Sobic004G332100--Sobic001G391300 Sobic004G332100--Sobic007G160200 Sobic004G332100--Sobic006G220300 Sobic003G339700 Sobic003G339700 Sobic004G332100--Sobic003G339700 Sobic004G332100--Sobic001G110900 Sobic004G332100--Sobic002G086800 Sobic009G069300 Sobic009G069300 Sobic004G332100--Sobic009G069300 Sobic004G332100--Sobic001G470900 Sobic004G332100--Sobic001G087700 Sobic001G470900--Sobic001G087700 Sobic001G470900--Sobic002G086800 Sobic001G470900--Sobic001G496300 Sobic001G470900--Sobic006G220300 Sobic001G470900--Sobic001G110900 Sobic004G058700 Sobic004G058700 Sobic001G470900--Sobic004G058700 Sobic001G470900--Sobic003G389700 Sobic001G498000 Sobic001G498000 Sobic001G470900--Sobic001G498000 Sobic001G470900--Sobic004G332100 Sobic001G045600--Sobic010G092600 Sobic001G045600--Sobic003G198150 Sobic002G189000 Sobic002G189000 Sobic001G045600--Sobic002G189000 Sobic001G045600--Sobic001G110900 Sobic001G045600--Sobic010G260300 Sobic001G045600--Sobic006G220300 Sobic002G271100 Sobic002G271100 Sobic001G045600--Sobic002G271100 Sobic003G066900 Sobic003G066900 Sobic001G045600--Sobic003G066900 Sobic002G359000 Sobic002G359000 Sobic001G045600--Sobic002G359000 Sobic010G260300--Sobic002G189000 Sobic003G229000 Sobic003G229000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic007G025800 Sobic007G025800 Sobic010G260300--Sobic007G025800 Sobic010G260300--Sobic002G271100 Sobic003G225900 Sobic003G225900 Sobic010G260300--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic010G260300--Sobic004G155150 Sobic003G233900 Sobic003G233900 Sobic010G260300--Sobic003G233900 Sobic010G260300--Sobic003G198150
Octagon: transcription factors


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