Gene annotation
Transcriptome id Sobic.001G045600.1
Synonym Sb01g004200
Functional annotation remorin, putative, expressed
UniProt A0A1Z5S4D9
Pfam PF03763
Panther DB PTHR31471 PTHR31471:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41870 : Remorin family protein
RAP-DB (Rice) LOC_Os03g59360.1 : remorin, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK12538 , KQK20391
Barley HORVU5Hr1G111130.2 , HORVU5Hr1G111130.3 , HORVU5Hr1G111130.1 , HORVU5Hr1G111120.5 , HORVU5Hr1G111120.4 , HORVU5Hr1G111120.3 , HORVU5Hr1G111120.2 , HORVU7Hr1G100790.2 , HORVU7Hr1G100790.1
Wheat TraesCS5D02G477500 , TraesCS5A02G464900 , TraesCS7D02G432700 , TraesCS7B02G342300 , TraesCS5B02G476700
Populus -


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cDNA sequences
Sobic.001G045600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G092600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
2 Sobic.003G198150 - -
3 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
4 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G220300 - -
7 Sobic.002G271100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
8 Sobic.003G066900 expressed protein -
9 Sobic.002G359000 formin, putative, expressed -
10 Sobic.003G078501 - -
11 Sobic.003G229000 cytochrome P450 72A1, putative, expressed -
12 Sobic.004G155150 - -
13 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
14 Sobic.003G233900 - -
15 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
16 Sobic.004G245900 - -
17 Sobic.004G170032 - -
18 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
19 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
20 Sobic.004G331300 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G045600 Sobic001G045600 Sobic010G092600 Sobic010G092600 Sobic001G045600--Sobic010G092600 Sobic003G198150 Sobic003G198150 Sobic001G045600--Sobic003G198150 Sobic002G189000 Sobic002G189000 Sobic001G045600--Sobic002G189000 Sobic001G110900 Sobic001G110900 Sobic001G045600--Sobic001G110900 Sobic010G260300 Sobic010G260300 Sobic001G045600--Sobic010G260300 Sobic006G220300 Sobic006G220300 Sobic001G045600--Sobic006G220300 Sobic002G271100 Sobic002G271100 Sobic001G045600--Sobic002G271100 Sobic003G066900 Sobic003G066900 Sobic001G045600--Sobic003G066900 Sobic002G359000 Sobic002G359000 Sobic001G045600--Sobic002G359000 Sobic001G125100 Sobic001G125100 Sobic010G092600--Sobic001G125100 Sobic010G006700 Sobic010G006700 Sobic010G092600--Sobic010G006700 Sobic003G078501 Sobic003G078501 Sobic010G092600--Sobic003G078501 Sobic010G092600--Sobic001G045600 Sobic004G331300 Sobic004G331300 Sobic010G092600--Sobic004G331300 Sobic007G217300 Sobic007G217300 Sobic010G092600--Sobic007G217300 Sobic006G220200 Sobic006G220200 Sobic010G092600--Sobic006G220200 Sobic009G000700 Sobic009G000700 Sobic010G092600--Sobic009G000700 Sobic004G155150 Sobic004G155150 Sobic010G092600--Sobic004G155150 Sobic008G044750 Sobic008G044750 Sobic003G198150--Sobic008G044750 Sobic003G198200 Sobic003G198200 Sobic003G198150--Sobic003G198200 Sobic009G128300 Sobic009G128300 Sobic003G198150--Sobic009G128300 Sobic001G509400 Sobic001G509400 Sobic003G198150--Sobic001G509400 Sobic003G079800 Sobic003G079800 Sobic003G198150--Sobic003G079800 Sobic003G227600 Sobic003G227600 Sobic003G198150--Sobic003G227600 Sobic004G170032 Sobic004G170032 Sobic003G198150--Sobic004G170032 Sobic003G233900 Sobic003G233900 Sobic003G198150--Sobic003G233900 Sobic001G450800 Sobic001G450800 Sobic003G198150--Sobic001G450800 Sobic002G013900 Sobic002G013900 Sobic002G189000--Sobic002G013900 Sobic002G189000--Sobic003G233900 Sobic002G189000--Sobic002G271100 Sobic002G189000--Sobic010G260300 Sobic002G189000--Sobic009G128300 Sobic002G110200 Sobic002G110200 Sobic002G189000--Sobic002G110200 Sobic003G225900 Sobic003G225900 Sobic002G189000--Sobic003G225900 Sobic002G189000--Sobic004G155150 Sobic004G285100 Sobic004G285100 Sobic002G189000--Sobic004G285100 Sobic001G110900--Sobic006G220300 Sobic003G272400 Sobic003G272400 Sobic001G110900--Sobic003G272400 Sobic001G140200 Sobic001G140200 Sobic001G110900--Sobic001G140200 Sobic001G110900--Sobic003G198150 Sobic010G233450 Sobic010G233450 Sobic001G110900--Sobic010G233450 Sobic001G110900--Sobic002G110200 Sobic001G110900--Sobic001G509400 Sobic001G110900--Sobic002G013900 Sobic005G209500 Sobic005G209500 Sobic001G110900--Sobic005G209500 Sobic010G260300--Sobic002G189000 Sobic003G229000 Sobic003G229000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic007G025800 Sobic007G025800 Sobic010G260300--Sobic007G025800 Sobic010G260300--Sobic002G271100 Sobic010G260300--Sobic003G225900 Sobic010G260300--Sobic004G155150 Sobic010G260300--Sobic003G233900 Sobic010G260300--Sobic003G198150 Sobic006G220300--Sobic006G220200 Sobic006G220300--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220300--Sobic009G155700 Sobic002G216400 Sobic002G216400 Sobic006G220300--Sobic002G216400 Sobic001G087700 Sobic001G087700 Sobic006G220300--Sobic001G087700 Sobic004G332100 Sobic004G332100 Sobic006G220300--Sobic004G332100 Sobic001G470900 Sobic001G470900 Sobic006G220300--Sobic001G470900 Sobic006G220300--Sobic001G045600 Sobic006G220300--Sobic010G260300 Sobic002G271100--Sobic002G189000 Sobic006G267900 Sobic006G267900 Sobic002G271100--Sobic006G267900 Sobic003G373150 Sobic003G373150 Sobic002G271100--Sobic003G373150 Sobic002G271100--Sobic003G225900 Sobic002G271100--Sobic004G155150 Sobic002G271100--Sobic002G013900 Sobic002G271100--Sobic003G233900 Sobic002G271100--Sobic010G260300 Sobic002G271100--Sobic009G000700 Sobic003G066900--Sobic003G233900 Sobic003G066900--Sobic008G044750 Sobic003G066900--Sobic009G128300 Sobic003G066900--Sobic009G000700 Sobic004G310600 Sobic004G310600 Sobic003G066900--Sobic004G310600 Sobic003G066900--Sobic004G285100 Sobic003G066900--Sobic001G509400 Sobic003G066900--Sobic004G155150 Sobic004G257350 Sobic004G257350 Sobic003G066900--Sobic004G257350 Sobic002G359000--Sobic001G045600 Sobic001G342600 Sobic001G342600 Sobic002G359000--Sobic001G342600 Sobic002G359000--Sobic001G110900 Sobic002G359000--Sobic006G220300 Sobic006G025300 Sobic006G025300 Sobic002G359000--Sobic006G025300 Sobic002G359000--Sobic003G198150 Sobic002G359000--Sobic010G092600 Sobic003G035100 Sobic003G035100 Sobic002G359000--Sobic003G035100 Sobic007G152800 Sobic007G152800 Sobic002G359000--Sobic007G152800
Octagon: transcription factors


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