Gene annotation
Transcriptome id Sobic.002G359000.1
Synonym FH6, ATFH6, Sb02g037970
Functional annotation formin, putative, expressed
UniProt C5XD41
Pfam PF02181
Panther DB PTHR23213 PTHR23213:SF257
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67470 : formin homolog 6
RAP-DB (Rice) LOC_Os07g39920.1 : formin, putative, expressed
MaizeGDB (Corn) Zm00025a048585
Brachypodium PNT74849 , PNT74850 , PNT74851 , KQK15463
Barley HORVU2Hr1G035230.4 , HORVU2Hr1G035230.2 , HORVU2Hr1G035230.5 , HORVU2Hr1G035230.3 , HORVU2Hr1G035230.1
Wheat TraesCS2A02G193700 , TraesCS2B02G213200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G045600 remorin, putative, expressed -
2 Sobic.001G342600 PDI, putative, expressed K17609: nucleoredoxin
3 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.006G220300 - -
5 Sobic.006G025300 white-brown complex homolog protein, putative, expressed -
6 Sobic.003G198150 - -
7 Sobic.010G092600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
8 Sobic.003G035100 no apical meristem protein, putative, expressed -
9 Sobic.007G152800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
10 Sobic.008G109100 expressed protein -
11 Sobic.001G312900 transporter family protein, putative, expressed -
12 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
13 Sobic.003G372800 expressed protein -
14 Sobic.006G102500 transporter family protein, putative, expressed -
15 Sobic.002G173800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
16 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
17 Sobic.002G281700 eukaryotic aspartyl protease domain containing protein, expressed -
18 Sobic.002G387200 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
19 Sobic.004G309600 ABA signaling component(PubMedID : 24151305)@"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice"(PubMedID : 30367619)@bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
20 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C


Gene co-expression network
sample Sobic002G359000 Sobic002G359000 Sobic001G045600 Sobic001G045600 Sobic002G359000--Sobic001G045600 Sobic001G342600 Sobic001G342600 Sobic002G359000--Sobic001G342600 Sobic001G110900 Sobic001G110900 Sobic002G359000--Sobic001G110900 Sobic006G220300 Sobic006G220300 Sobic002G359000--Sobic006G220300 Sobic006G025300 Sobic006G025300 Sobic002G359000--Sobic006G025300 Sobic003G198150 Sobic003G198150 Sobic002G359000--Sobic003G198150 Sobic010G092600 Sobic010G092600 Sobic002G359000--Sobic010G092600 Sobic003G035100 Sobic003G035100 Sobic002G359000--Sobic003G035100 Sobic007G152800 Sobic007G152800 Sobic002G359000--Sobic007G152800 Sobic001G045600--Sobic010G092600 Sobic001G045600--Sobic003G198150 Sobic002G189000 Sobic002G189000 Sobic001G045600--Sobic002G189000 Sobic001G045600--Sobic001G110900 Sobic010G260300 Sobic010G260300 Sobic001G045600--Sobic010G260300 Sobic001G045600--Sobic006G220300 Sobic002G271100 Sobic002G271100 Sobic001G045600--Sobic002G271100 Sobic003G066900 Sobic003G066900 Sobic001G045600--Sobic003G066900 Sobic001G045600--Sobic002G359000 Sobic001G342600--Sobic006G025300 Sobic007G178200 Sobic007G178200 Sobic001G342600--Sobic007G178200 Sobic006G191100 Sobic006G191100 Sobic001G342600--Sobic006G191100 Sobic003G056500 Sobic003G056500 Sobic001G342600--Sobic003G056500 Sobic003G278700 Sobic003G278700 Sobic001G342600--Sobic003G278700 Sobic005G094200 Sobic005G094200 Sobic001G342600--Sobic005G094200 Sobic006G267700 Sobic006G267700 Sobic001G342600--Sobic006G267700 Sobic001G342600--Sobic002G359000 Sobic002G306000 Sobic002G306000 Sobic001G342600--Sobic002G306000 Sobic001G110900--Sobic006G220300 Sobic003G272400 Sobic003G272400 Sobic001G110900--Sobic003G272400 Sobic001G140200 Sobic001G140200 Sobic001G110900--Sobic001G140200 Sobic001G110900--Sobic003G198150 Sobic010G233450 Sobic010G233450 Sobic001G110900--Sobic010G233450 Sobic002G110200 Sobic002G110200 Sobic001G110900--Sobic002G110200 Sobic001G509400 Sobic001G509400 Sobic001G110900--Sobic001G509400 Sobic002G013900 Sobic002G013900 Sobic001G110900--Sobic002G013900 Sobic005G209500 Sobic005G209500 Sobic001G110900--Sobic005G209500 Sobic006G220200 Sobic006G220200 Sobic006G220300--Sobic006G220200 Sobic006G220300--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220300--Sobic009G155700 Sobic002G216400 Sobic002G216400 Sobic006G220300--Sobic002G216400 Sobic001G087700 Sobic001G087700 Sobic006G220300--Sobic001G087700 Sobic004G332100 Sobic004G332100 Sobic006G220300--Sobic004G332100 Sobic001G470900 Sobic001G470900 Sobic006G220300--Sobic001G470900 Sobic006G220300--Sobic001G045600 Sobic006G220300--Sobic010G260300 Sobic006G025300--Sobic001G342600 Sobic009G195300 Sobic009G195300 Sobic006G025300--Sobic009G195300 Sobic003G424400 Sobic003G424400 Sobic006G025300--Sobic003G424400 Sobic010G068500 Sobic010G068500 Sobic006G025300--Sobic010G068500 Sobic001G312900 Sobic001G312900 Sobic006G025300--Sobic001G312900 Sobic006G052500 Sobic006G052500 Sobic006G025300--Sobic006G052500 Sobic006G025300--Sobic001G110900 Sobic003G422700 Sobic003G422700 Sobic006G025300--Sobic003G422700 Sobic006G025300--Sobic003G272400 Sobic008G044750 Sobic008G044750 Sobic003G198150--Sobic008G044750 Sobic003G198200 Sobic003G198200 Sobic003G198150--Sobic003G198200 Sobic009G128300 Sobic009G128300 Sobic003G198150--Sobic009G128300 Sobic003G198150--Sobic001G509400 Sobic003G079800 Sobic003G079800 Sobic003G198150--Sobic003G079800 Sobic003G227600 Sobic003G227600 Sobic003G198150--Sobic003G227600 Sobic004G170032 Sobic004G170032 Sobic003G198150--Sobic004G170032 Sobic003G233900 Sobic003G233900 Sobic003G198150--Sobic003G233900 Sobic001G450800 Sobic001G450800 Sobic003G198150--Sobic001G450800 Sobic001G125100 Sobic001G125100 Sobic010G092600--Sobic001G125100 Sobic010G006700 Sobic010G006700 Sobic010G092600--Sobic010G006700 Sobic003G078501 Sobic003G078501 Sobic010G092600--Sobic003G078501 Sobic010G092600--Sobic001G045600 Sobic004G331300 Sobic004G331300 Sobic010G092600--Sobic004G331300 Sobic007G217300 Sobic007G217300 Sobic010G092600--Sobic007G217300 Sobic010G092600--Sobic006G220200 Sobic009G000700 Sobic009G000700 Sobic010G092600--Sobic009G000700 Sobic004G155150 Sobic004G155150 Sobic010G092600--Sobic004G155150 Sobic003G309200 Sobic003G309200 Sobic003G035100--Sobic003G309200 Sobic002G134600 Sobic002G134600 Sobic003G035100--Sobic002G134600 Sobic003G372800 Sobic003G372800 Sobic003G035100--Sobic003G372800 Sobic003G035100--Sobic010G068500 Sobic001G154500 Sobic001G154500 Sobic003G035100--Sobic001G154500 Sobic003G035100--Sobic001G110900 Sobic009G233300 Sobic009G233300 Sobic003G035100--Sobic009G233300 Sobic001G262700 Sobic001G262700 Sobic003G035100--Sobic001G262700 Sobic001G387600 Sobic001G387600 Sobic003G035100--Sobic001G387600 Sobic010G165200 Sobic010G165200 Sobic007G152800--Sobic010G165200 Sobic005G121200 Sobic005G121200 Sobic007G152800--Sobic005G121200 Sobic001G127800 Sobic001G127800 Sobic007G152800--Sobic001G127800 Sobic001G048900 Sobic001G048900 Sobic007G152800--Sobic001G048900 Sobic007G152800--Sobic002G359000 Sobic008G087500 Sobic008G087500 Sobic007G152800--Sobic008G087500 Sobic003G244100 Sobic003G244100 Sobic007G152800--Sobic003G244100 Sobic009G072200 Sobic009G072200 Sobic007G152800--Sobic009G072200 Sobic002G173800 Sobic002G173800 Sobic007G152800--Sobic002G173800
Octagon: transcription factors


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