Gene annotation
Transcriptome id Sobic.002G173800.1
Synonym Sb02g022250
Functional annotation hydroxyproline-rich glycoprotein family protein, putative, expressed
UniProt C5X9X4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g16280.1 : hydroxyproline-rich glycoprotein family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046544
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G075800 Up-reguralion under drought(PubMedID : 24916767)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
2 Sobic.002G110100 cytochrome P450 71E1, putative, expressed -
3 Sobic.008G029300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
4 Sobic.001G460300 expressed protein -
5 Sobic.007G180900 BAG domain-containing protein, putative, expressed -
6 Sobic.005G121200 "similar to HVA22-like protein e, putative, expressed"(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
7 Sobic.002G193600 endoglucanase, putative, expressed -
8 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
9 Sobic.009G072200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
10 Sobic.002G164960 - -
11 Sobic.009G099000 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
12 Sobic.002G359000 formin, putative, expressed -
13 Sobic.007G152800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
14 Sobic.004G296200 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.009G136700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
17 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.008G087500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
19 Sobic.009G027800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
20 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -


Gene co-expression network
sample Sobic002G173800 Sobic002G173800 Sobic002G075800 Sobic002G075800 Sobic002G173800--Sobic002G075800 Sobic002G110100 Sobic002G110100 Sobic002G173800--Sobic002G110100 Sobic008G029300 Sobic008G029300 Sobic002G173800--Sobic008G029300 Sobic001G460300 Sobic001G460300 Sobic002G173800--Sobic001G460300 Sobic007G180900 Sobic007G180900 Sobic002G173800--Sobic007G180900 Sobic005G121200 Sobic005G121200 Sobic002G173800--Sobic005G121200 Sobic002G193600 Sobic002G193600 Sobic002G173800--Sobic002G193600 Sobic002G118700 Sobic002G118700 Sobic002G173800--Sobic002G118700 Sobic009G072200 Sobic009G072200 Sobic002G173800--Sobic009G072200 Sobic009G136700 Sobic009G136700 Sobic002G075800--Sobic009G136700 Sobic002G075800--Sobic008G029300 Sobic002G075800--Sobic002G173800 Sobic003G356000 Sobic003G356000 Sobic002G075800--Sobic003G356000 Sobic009G161800 Sobic009G161800 Sobic002G075800--Sobic009G161800 Sobic003G131800 Sobic003G131800 Sobic002G075800--Sobic003G131800 Sobic002G164960 Sobic002G164960 Sobic002G075800--Sobic002G164960 Sobic008G087500 Sobic008G087500 Sobic002G075800--Sobic008G087500 Sobic006G183200 Sobic006G183200 Sobic002G075800--Sobic006G183200 Sobic002G226700 Sobic002G226700 Sobic002G110100--Sobic002G226700 Sobic010G166700 Sobic010G166700 Sobic002G110100--Sobic010G166700 Sobic002G110100--Sobic002G173800 Sobic002G110100--Sobic009G136700 Sobic004G296200 Sobic004G296200 Sobic002G110100--Sobic004G296200 Sobic005G141000 Sobic005G141000 Sobic002G110100--Sobic005G141000 Sobic004G295700 Sobic004G295700 Sobic002G110100--Sobic004G295700 Sobic002G110100--Sobic002G075800 Sobic007G050600 Sobic007G050600 Sobic002G110100--Sobic007G050600 Sobic008G029300--Sobic002G075800 Sobic003G198200 Sobic003G198200 Sobic008G029300--Sobic003G198200 Sobic008G029300--Sobic009G161800 Sobic004G170032 Sobic004G170032 Sobic008G029300--Sobic004G170032 Sobic003G198150 Sobic003G198150 Sobic008G029300--Sobic003G198150 Sobic003G378000 Sobic003G378000 Sobic008G029300--Sobic003G378000 Sobic002G148700 Sobic002G148700 Sobic008G029300--Sobic002G148700 Sobic008G029300--Sobic002G193600 Sobic008G029300--Sobic002G173800 Sobic003G278700 Sobic003G278700 Sobic001G460300--Sobic003G278700 Sobic003G032900 Sobic003G032900 Sobic001G460300--Sobic003G032900 Sobic009G099000 Sobic009G099000 Sobic001G460300--Sobic009G099000 Sobic001G460300--Sobic005G121200 Sobic001G157400 Sobic001G157400 Sobic001G460300--Sobic001G157400 Sobic003G227600 Sobic003G227600 Sobic001G460300--Sobic003G227600 Sobic002G337800 Sobic002G337800 Sobic001G460300--Sobic002G337800 Sobic009G216900 Sobic009G216900 Sobic001G460300--Sobic009G216900 Sobic002G325900 Sobic002G325900 Sobic001G460300--Sobic002G325900 Sobic003G144600 Sobic003G144600 Sobic007G180900--Sobic003G144600 Sobic002G075500 Sobic002G075500 Sobic007G180900--Sobic002G075500 Sobic002G187400 Sobic002G187400 Sobic007G180900--Sobic002G187400 Sobic007G180900--Sobic002G118700 Sobic004G261200 Sobic004G261200 Sobic007G180900--Sobic004G261200 Sobic004G257800 Sobic004G257800 Sobic007G180900--Sobic004G257800 Sobic003G198400 Sobic003G198400 Sobic007G180900--Sobic003G198400 Sobic007G180900--Sobic009G099000 Sobic003G353400 Sobic003G353400 Sobic007G180900--Sobic003G353400 Sobic001G127800 Sobic001G127800 Sobic005G121200--Sobic001G127800 Sobic005G121200--Sobic001G460300 Sobic005G121200--Sobic002G337800 Sobic005G121200--Sobic003G278700 Sobic009G030200 Sobic009G030200 Sobic005G121200--Sobic009G030200 Sobic001G396400 Sobic001G396400 Sobic005G121200--Sobic001G396400 Sobic005G121200--Sobic003G198200 Sobic007G152800 Sobic007G152800 Sobic005G121200--Sobic007G152800 Sobic005G121200--Sobic003G198150 Sobic001G168500 Sobic001G168500 Sobic002G193600--Sobic001G168500 Sobic002G193600--Sobic005G121200 Sobic002G193600--Sobic008G029300 Sobic003G226300 Sobic003G226300 Sobic002G193600--Sobic003G226300 Sobic002G193600--Sobic002G173800 Sobic002G193600--Sobic002G075800 Sobic004G203500 Sobic004G203500 Sobic002G193600--Sobic004G203500 Sobic005G061033 Sobic005G061033 Sobic002G193600--Sobic005G061033 Sobic001G294600 Sobic001G294600 Sobic002G193600--Sobic001G294600 Sobic009G063400 Sobic009G063400 Sobic002G118700--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic002G118700--Sobic009G125900 Sobic002G118700--Sobic002G075500 Sobic001G099100 Sobic001G099100 Sobic002G118700--Sobic001G099100 Sobic004G051300 Sobic004G051300 Sobic002G118700--Sobic004G051300 Sobic009G026101 Sobic009G026101 Sobic002G118700--Sobic009G026101 Sobic010G090500 Sobic010G090500 Sobic002G118700--Sobic010G090500 Sobic002G118700--Sobic007G180900 Sobic002G276600 Sobic002G276600 Sobic002G118700--Sobic002G276600 Sobic009G072200--Sobic002G164960 Sobic010G165200 Sobic010G165200 Sobic009G072200--Sobic010G165200 Sobic009G072200--Sobic001G127800 Sobic009G257700 Sobic009G257700 Sobic009G072200--Sobic009G257700 Sobic006G000300 Sobic006G000300 Sobic009G072200--Sobic006G000300 Sobic006G064800 Sobic006G064800 Sobic009G072200--Sobic006G064800 Sobic009G072200--Sobic002G075800 Sobic009G072200--Sobic007G152800 Sobic009G072200--Sobic002G173800
Octagon: transcription factors


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