Gene annotation
Transcriptome id Sobic.004G296200.1
Synonym Sb04g033010
Functional annotation inactive receptor kinase At2g26730 precursor, putative, expressed
UniProt C5XRZ1
Pfam PF07714
Panther DB PTHR27008 PTHR27008:SF21
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G07620 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g43870.1 : inactive receptor kinase At2g26730 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020887 , Zm00025a032193
Brachypodium KQK00596
Barley HORVU6Hr1G062850.6 , HORVU6Hr1G062850.5 , HORVU6Hr1G062850.3 , HORVU6Hr1G062850.2
Wheat TraesCS6A02G244100 , TraesCS6D02G226500 , TraesCS6B02G280100 , TraesCS6A02G244300 , TraesCS2A02G416400
Populus -


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cDNA sequences
Sobic.004G296200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G362300 expressed protein -
2 Sobic.008G024300 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.003G410700 exostosin family domain containing protein, expressed -
4 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
5 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
7 Sobic.007G180900 BAG domain-containing protein, putative, expressed -
8 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
10 Sobic.004G295700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.004G203500 actin, putative, expressed K18584: ACTR3, actin-related protein 3
12 Sobic.003G144600 zinc finger, C3HC4 type, putative, expressed -
13 Sobic.003G198400 - -
14 Sobic.002G110100 cytochrome P450 71E1, putative, expressed -
15 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
16 Sobic.010G123300 expressed protein -
17 Sobic.006G182500 WD-40 repeat family protein, putative, expressed -
18 Sobic.010G033300 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
19 Sobic.003G143900 kelch motif family protein, putative, expressed -
20 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase


Gene co-expression network
sample Sobic004G296200 Sobic004G296200 Sobic003G362300 Sobic003G362300 Sobic004G296200--Sobic003G362300 Sobic008G024300 Sobic008G024300 Sobic004G296200--Sobic008G024300 Sobic003G410700 Sobic003G410700 Sobic004G296200--Sobic003G410700 Sobic007G050600 Sobic007G050600 Sobic004G296200--Sobic007G050600 Sobic001G460000 Sobic001G460000 Sobic004G296200--Sobic001G460000 Sobic004G262600 Sobic004G262600 Sobic004G296200--Sobic004G262600 Sobic007G180900 Sobic007G180900 Sobic004G296200--Sobic007G180900 Sobic004G261200 Sobic004G261200 Sobic004G296200--Sobic004G261200 Sobic001G021500 Sobic001G021500 Sobic004G296200--Sobic001G021500 Sobic003G362300--Sobic004G296200 Sobic004G234300 Sobic004G234300 Sobic003G362300--Sobic004G234300 Sobic003G144600 Sobic003G144600 Sobic003G362300--Sobic003G144600 Sobic003G143900 Sobic003G143900 Sobic003G362300--Sobic003G143900 Sobic004G295700 Sobic004G295700 Sobic003G362300--Sobic004G295700 Sobic005G060766 Sobic005G060766 Sobic003G362300--Sobic005G060766 Sobic003G362300--Sobic004G261200 Sobic004G203500 Sobic004G203500 Sobic003G362300--Sobic004G203500 Sobic003G362300--Sobic007G180900 Sobic008G024300--Sobic004G296200 Sobic010G165100 Sobic010G165100 Sobic008G024300--Sobic010G165100 Sobic005G036500 Sobic005G036500 Sobic008G024300--Sobic005G036500 Sobic002G225000 Sobic002G225000 Sobic008G024300--Sobic002G225000 Sobic002G246000 Sobic002G246000 Sobic008G024300--Sobic002G246000 Sobic006G182500 Sobic006G182500 Sobic008G024300--Sobic006G182500 Sobic003G229700 Sobic003G229700 Sobic008G024300--Sobic003G229700 Sobic002G025300 Sobic002G025300 Sobic008G024300--Sobic002G025300 Sobic003G287000 Sobic003G287000 Sobic008G024300--Sobic003G287000 Sobic003G410700--Sobic004G262600 Sobic003G410700--Sobic004G261200 Sobic009G194200 Sobic009G194200 Sobic003G410700--Sobic009G194200 Sobic003G389100 Sobic003G389100 Sobic003G410700--Sobic003G389100 Sobic003G410700--Sobic004G296200 Sobic003G094600 Sobic003G094600 Sobic003G410700--Sobic003G094600 Sobic001G440500 Sobic001G440500 Sobic003G410700--Sobic001G440500 Sobic003G223900 Sobic003G223900 Sobic003G410700--Sobic003G223900 Sobic001G436100 Sobic001G436100 Sobic003G410700--Sobic001G436100 Sobic007G050600--Sobic001G460000 Sobic001G334900 Sobic001G334900 Sobic007G050600--Sobic001G334900 Sobic007G050600--Sobic004G295700 Sobic009G063400 Sobic009G063400 Sobic007G050600--Sobic009G063400 Sobic007G050600--Sobic004G296200 Sobic009G232200 Sobic009G232200 Sobic007G050600--Sobic009G232200 Sobic001G012600 Sobic001G012600 Sobic007G050600--Sobic001G012600 Sobic004G257700 Sobic004G257700 Sobic007G050600--Sobic004G257700 Sobic010G228100 Sobic010G228100 Sobic007G050600--Sobic010G228100 Sobic001G460000--Sobic007G050600 Sobic002G118700 Sobic002G118700 Sobic001G460000--Sobic002G118700 Sobic001G460000--Sobic009G063400 Sobic001G460000--Sobic004G295700 Sobic002G075500 Sobic002G075500 Sobic001G460000--Sobic002G075500 Sobic001G460000--Sobic001G334900 Sobic002G321400 Sobic002G321400 Sobic001G460000--Sobic002G321400 Sobic001G460000--Sobic004G296200 Sobic004G265600 Sobic004G265600 Sobic001G460000--Sobic004G265600 Sobic004G262600--Sobic003G410700 Sobic004G262600--Sobic003G223900 Sobic004G262600--Sobic004G261200 Sobic009G188800 Sobic009G188800 Sobic004G262600--Sobic009G188800 Sobic003G399000 Sobic003G399000 Sobic004G262600--Sobic003G399000 Sobic004G262600--Sobic009G194200 Sobic001G217300 Sobic001G217300 Sobic004G262600--Sobic001G217300 Sobic001G139300 Sobic001G139300 Sobic004G262600--Sobic001G139300 Sobic003G017200 Sobic003G017200 Sobic004G262600--Sobic003G017200 Sobic007G180900--Sobic003G144600 Sobic007G180900--Sobic002G075500 Sobic002G187400 Sobic002G187400 Sobic007G180900--Sobic002G187400 Sobic007G180900--Sobic002G118700 Sobic007G180900--Sobic004G261200 Sobic004G257800 Sobic004G257800 Sobic007G180900--Sobic004G257800 Sobic003G198400 Sobic003G198400 Sobic007G180900--Sobic003G198400 Sobic009G099000 Sobic009G099000 Sobic007G180900--Sobic009G099000 Sobic003G353400 Sobic003G353400 Sobic007G180900--Sobic003G353400 Sobic004G261200--Sobic003G144600 Sobic004G278200 Sobic004G278200 Sobic004G261200--Sobic004G278200 Sobic004G261200--Sobic009G194200 Sobic004G261200--Sobic003G410700 Sobic004G261200--Sobic007G180900 Sobic003G293600 Sobic003G293600 Sobic004G261200--Sobic003G293600 Sobic001G063600 Sobic001G063600 Sobic004G261200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G261200--Sobic003G032900 Sobic007G166900 Sobic007G166900 Sobic004G261200--Sobic007G166900 Sobic004G243400 Sobic004G243400 Sobic001G021500--Sobic004G243400 Sobic002G377300 Sobic002G377300 Sobic001G021500--Sobic002G377300 Sobic009G055900 Sobic009G055900 Sobic001G021500--Sobic009G055900 Sobic003G165800 Sobic003G165800 Sobic001G021500--Sobic003G165800 Sobic008G190500 Sobic008G190500 Sobic001G021500--Sobic008G190500 Sobic003G347300 Sobic003G347300 Sobic001G021500--Sobic003G347300 Sobic010G123300 Sobic010G123300 Sobic001G021500--Sobic010G123300 Sobic009G144200 Sobic009G144200 Sobic001G021500--Sobic009G144200 Sobic007G210900 Sobic007G210900 Sobic001G021500--Sobic007G210900
Octagon: transcription factors


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