Gene annotation
Transcriptome id Sobic.004G261200.1
Synonym Sb04g029940
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XZW5 , C6JSU3
Pfam -
Panther DB PTHR35714 PTHR35714:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35320 : -
RAP-DB (Rice) LOC_Os02g48470.1 : expressed protein
MaizeGDB (Corn) Zm00025a032525 , Zm00025a021809
Brachypodium KQK01016
Barley HORVU6Hr1G070290.1
Wheat -
Populus -


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cDNA sequences
Sobic.004G261200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G144600 zinc finger, C3HC4 type, putative, expressed -
2 Sobic.004G278200 DUF581 domain containing protein, expressed -
3 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
4 Sobic.003G410700 exostosin family domain containing protein, expressed -
5 Sobic.007G180900 BAG domain-containing protein, putative, expressed -
6 Sobic.003G293600 -(PubMedID : 34525227)@beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
7 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
8 Sobic.003G032900 expressed protein -
9 Sobic.007G166900 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.006G193900 DUF581 domain containing protein, expressed -
11 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
12 Sobic.002G321600 - -
13 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.008G159100 similar to Calmodulin-2(PubMedID : 29862293)@Ca2+ sensors group(PubMedID : 30367619)@OsCML5 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
15 Sobic.004G303600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.001G476400 - -
19 Sobic.007G137400 CSLA11 - cellulose synthase-like family A, expressed K13680: beta-mannan synthase
20 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -


Gene co-expression network
sample Sobic004G261200 Sobic004G261200 Sobic003G144600 Sobic003G144600 Sobic004G261200--Sobic003G144600 Sobic004G278200 Sobic004G278200 Sobic004G261200--Sobic004G278200 Sobic009G194200 Sobic009G194200 Sobic004G261200--Sobic009G194200 Sobic003G410700 Sobic003G410700 Sobic004G261200--Sobic003G410700 Sobic007G180900 Sobic007G180900 Sobic004G261200--Sobic007G180900 Sobic003G293600 Sobic003G293600 Sobic004G261200--Sobic003G293600 Sobic001G063600 Sobic001G063600 Sobic004G261200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G261200--Sobic003G032900 Sobic007G166900 Sobic007G166900 Sobic004G261200--Sobic007G166900 Sobic003G144600--Sobic007G180900 Sobic003G144600--Sobic004G278200 Sobic003G144600--Sobic007G166900 Sobic003G144600--Sobic004G261200 Sobic010G006700 Sobic010G006700 Sobic003G144600--Sobic010G006700 Sobic002G321600 Sobic002G321600 Sobic003G144600--Sobic002G321600 Sobic001G080300 Sobic001G080300 Sobic003G144600--Sobic001G080300 Sobic005G060766 Sobic005G060766 Sobic003G144600--Sobic005G060766 Sobic003G144600--Sobic003G032900 Sobic003G373150 Sobic003G373150 Sobic004G278200--Sobic003G373150 Sobic004G278200--Sobic007G166900 Sobic006G055600 Sobic006G055600 Sobic004G278200--Sobic006G055600 Sobic004G278200--Sobic001G080300 Sobic002G427400 Sobic002G427400 Sobic004G278200--Sobic002G427400 Sobic004G321000 Sobic004G321000 Sobic004G278200--Sobic004G321000 Sobic004G278200--Sobic001G063600 Sobic004G278200--Sobic003G032900 Sobic004G283201 Sobic004G283201 Sobic004G278200--Sobic004G283201 Sobic010G008600 Sobic010G008600 Sobic009G194200--Sobic010G008600 Sobic001G436100 Sobic001G436100 Sobic009G194200--Sobic001G436100 Sobic009G194200--Sobic004G261200 Sobic009G194200--Sobic003G410700 Sobic001G061900 Sobic001G061900 Sobic009G194200--Sobic001G061900 Sobic006G242100 Sobic006G242100 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic010G101400 Sobic010G101400 Sobic009G194200--Sobic010G101400 Sobic001G038200 Sobic001G038200 Sobic009G194200--Sobic001G038200 Sobic003G410700--Sobic004G262600 Sobic003G410700--Sobic004G261200 Sobic003G410700--Sobic009G194200 Sobic003G389100 Sobic003G389100 Sobic003G410700--Sobic003G389100 Sobic004G296200 Sobic004G296200 Sobic003G410700--Sobic004G296200 Sobic003G094600 Sobic003G094600 Sobic003G410700--Sobic003G094600 Sobic001G440500 Sobic001G440500 Sobic003G410700--Sobic001G440500 Sobic003G223900 Sobic003G223900 Sobic003G410700--Sobic003G223900 Sobic003G410700--Sobic001G436100 Sobic007G180900--Sobic003G144600 Sobic002G075500 Sobic002G075500 Sobic007G180900--Sobic002G075500 Sobic002G187400 Sobic002G187400 Sobic007G180900--Sobic002G187400 Sobic002G118700 Sobic002G118700 Sobic007G180900--Sobic002G118700 Sobic007G180900--Sobic004G261200 Sobic004G257800 Sobic004G257800 Sobic007G180900--Sobic004G257800 Sobic003G198400 Sobic003G198400 Sobic007G180900--Sobic003G198400 Sobic009G099000 Sobic009G099000 Sobic007G180900--Sobic009G099000 Sobic003G353400 Sobic003G353400 Sobic007G180900--Sobic003G353400 Sobic009G258300 Sobic009G258300 Sobic003G293600--Sobic009G258300 Sobic003G293600--Sobic004G278200 Sobic003G293600--Sobic007G166900 Sobic006G267900 Sobic006G267900 Sobic003G293600--Sobic006G267900 Sobic003G293600--Sobic010G006700 Sobic003G293600--Sobic002G427400 Sobic001G125100 Sobic001G125100 Sobic003G293600--Sobic001G125100 Sobic003G293600--Sobic003G373150 Sobic003G293600--Sobic004G321000 Sobic001G476400 Sobic001G476400 Sobic001G063600--Sobic001G476400 Sobic005G231700 Sobic005G231700 Sobic001G063600--Sobic005G231700 Sobic010G080400 Sobic010G080400 Sobic001G063600--Sobic010G080400 Sobic008G159100 Sobic008G159100 Sobic001G063600--Sobic008G159100 Sobic009G170100 Sobic009G170100 Sobic001G063600--Sobic009G170100 Sobic001G063600--Sobic003G032900 Sobic002G068800 Sobic002G068800 Sobic001G063600--Sobic002G068800 Sobic001G081600 Sobic001G081600 Sobic001G063600--Sobic001G081600 Sobic004G283300 Sobic004G283300 Sobic001G063600--Sobic004G283300 Sobic003G032900--Sobic001G063600 Sobic003G032900--Sobic004G278200 Sobic003G032900--Sobic002G427400 Sobic003G032900--Sobic008G159100 Sobic003G032900--Sobic001G080300 Sobic003G032900--Sobic001G476400 Sobic003G032900--Sobic003G373150 Sobic003G032900--Sobic010G080400 Sobic004G025000 Sobic004G025000 Sobic003G032900--Sobic004G025000 Sobic007G166900--Sobic010G006700 Sobic007G166900--Sobic002G427400 Sobic004G331300 Sobic004G331300 Sobic007G166900--Sobic004G331300 Sobic007G166900--Sobic003G373150 Sobic004G310600 Sobic004G310600 Sobic007G166900--Sobic004G310600 Sobic007G166900--Sobic006G267900 Sobic001G159850 Sobic001G159850 Sobic007G166900--Sobic001G159850
Octagon: transcription factors


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