Gene annotation
Transcriptome id Sobic.007G137400.1
Synonym CSLA09, RAT4, ATCSLA9, CSLA9, ATCSLA09, Sb07g021300
Functional annotation CSLA11 - cellulose synthase-like family A, expressed
UniProt A0A1B6PHR1
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF21
NCBI CDD -
KEGG Orthology K13680; beta-mannan synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03760 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os08g33740.1 : CSLA11 - cellulose synthase-like family A, expressed
MaizeGDB (Corn) Zm00025a031154 , Zm00025a006992 , Zm00025a031146 , Zm00025a005925
Brachypodium KQJ98402
Barley HORVU3Hr1G109930.20 , HORVU3Hr1G109930.21 , HORVU3Hr1G109930.22 , HORVU3Hr1G109930.19 , HORVU3Hr1G109930.18 , HORVU3Hr1G109930.14 , HORVU3Hr1G109930.17 , HORVU3Hr1G109930.16 , HORVU3Hr1G109930.11 , HORVU3Hr1G109930.10 , HORVU3Hr1G109930.13 , HORVU3Hr1G109930.12 , HORVU3Hr1G002660.9 , HORVU3Hr1G002660.8 , HORVU3Hr1G002660.3 , HORVU3Hr1G002660.2 , HORVU3Hr1G002660.1 , HORVU3Hr1G002660.5 , HORVU3Hr1G109930.8 , HORVU3Hr1G109930.3 , HORVU3Hr1G109930.5 , HORVU3Hr1G109930.4 , HORVU3Hr1G109930.6
Wheat TraesCS3A02G496400 , TraesCS3B02G558400 , TraesCS7D02G389400 , TraesCS3A02G019200 , TraesCS3D02G504200 , TraesCS7D02G544700 , TraesCS7D02G389100 , TraesCS3D02G027600 , TraesCS3D02G027600 , TraesCS3D02G015000 , TraesCS7B02G494000 , TraesCS3B02G558400 , TraesCS3A02G496400 , TraesCSU02G046600 , TraesCS7D02G389100 , TraesCS7A02G393800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G144600 zinc finger, C3HC4 type, putative, expressed -
3 Sobic.007G178200 ER lumen protein retaining receptor, putative, expressed -
4 Sobic.001G284400 jmjC domain containing protein, expressed -
5 Sobic.002G373600 von Willebrand factor type A domain containing protein, expressed -
6 Sobic.001G284425 - -
7 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
8 Sobic.003G293600 -(PubMedID : 34525227)@beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
9 Sobic.007G166900 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.004G278200 DUF581 domain containing protein, expressed -
11 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.003G373800 expressed protein -
13 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
14 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
16 Sobic.003G032900 expressed protein -
17 Sobic.008G159100 similar to Calmodulin-2(PubMedID : 29862293)@Ca2+ sensors group(PubMedID : 30367619)@OsCML5 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
18 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
20 Sobic.007G057100 expressed protein -


Gene co-expression network
sample Sobic007G137400 Sobic007G137400 Sobic004G261200 Sobic004G261200 Sobic007G137400--Sobic004G261200 Sobic003G144600 Sobic003G144600 Sobic007G137400--Sobic003G144600 Sobic007G178200 Sobic007G178200 Sobic007G137400--Sobic007G178200 Sobic001G284400 Sobic001G284400 Sobic007G137400--Sobic001G284400 Sobic002G373600 Sobic002G373600 Sobic007G137400--Sobic002G373600 Sobic001G284425 Sobic001G284425 Sobic007G137400--Sobic001G284425 Sobic009G208800 Sobic009G208800 Sobic007G137400--Sobic009G208800 Sobic003G293600 Sobic003G293600 Sobic007G137400--Sobic003G293600 Sobic007G166900 Sobic007G166900 Sobic007G137400--Sobic007G166900 Sobic004G261200--Sobic003G144600 Sobic004G278200 Sobic004G278200 Sobic004G261200--Sobic004G278200 Sobic009G194200 Sobic009G194200 Sobic004G261200--Sobic009G194200 Sobic003G410700 Sobic003G410700 Sobic004G261200--Sobic003G410700 Sobic007G180900 Sobic007G180900 Sobic004G261200--Sobic007G180900 Sobic004G261200--Sobic003G293600 Sobic001G063600 Sobic001G063600 Sobic004G261200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G261200--Sobic003G032900 Sobic004G261200--Sobic007G166900 Sobic003G144600--Sobic007G180900 Sobic003G144600--Sobic004G278200 Sobic003G144600--Sobic007G166900 Sobic003G144600--Sobic004G261200 Sobic010G006700 Sobic010G006700 Sobic003G144600--Sobic010G006700 Sobic002G321600 Sobic002G321600 Sobic003G144600--Sobic002G321600 Sobic001G080300 Sobic001G080300 Sobic003G144600--Sobic001G080300 Sobic005G060766 Sobic005G060766 Sobic003G144600--Sobic005G060766 Sobic003G144600--Sobic003G032900 Sobic003G392200 Sobic003G392200 Sobic007G178200--Sobic003G392200 Sobic001G416600 Sobic001G416600 Sobic007G178200--Sobic001G416600 Sobic004G025000 Sobic004G025000 Sobic007G178200--Sobic004G025000 Sobic008G016900 Sobic008G016900 Sobic007G178200--Sobic008G016900 Sobic003G361300 Sobic003G361300 Sobic007G178200--Sobic003G361300 Sobic009G134600 Sobic009G134600 Sobic007G178200--Sobic009G134600 Sobic004G245900 Sobic004G245900 Sobic007G178200--Sobic004G245900 Sobic002G330300 Sobic002G330300 Sobic007G178200--Sobic002G330300 Sobic010G071700 Sobic010G071700 Sobic007G178200--Sobic010G071700 Sobic001G284400--Sobic002G373600 Sobic001G284400--Sobic001G284425 Sobic008G129000 Sobic008G129000 Sobic001G284400--Sobic008G129000 Sobic010G076700 Sobic010G076700 Sobic001G284400--Sobic010G076700 Sobic003G385000 Sobic003G385000 Sobic001G284400--Sobic003G385000 Sobic010G252900 Sobic010G252900 Sobic001G284400--Sobic010G252900 Sobic005G044300 Sobic005G044300 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic002G373600--Sobic001G284400 Sobic002G373600--Sobic001G284425 Sobic002G373600--Sobic003G385000 Sobic006G199700 Sobic006G199700 Sobic002G373600--Sobic006G199700 Sobic002G373600--Sobic010G252900 Sobic003G435400 Sobic003G435400 Sobic002G373600--Sobic003G435400 Sobic010G134700 Sobic010G134700 Sobic002G373600--Sobic010G134700 Sobic010G220400 Sobic010G220400 Sobic002G373600--Sobic010G220400 Sobic003G327600 Sobic003G327600 Sobic002G373600--Sobic003G327600 Sobic001G284425--Sobic003G385000 Sobic001G284425--Sobic001G284400 Sobic001G284425--Sobic002G373600 Sobic001G284425--Sobic006G199700 Sobic006G069200 Sobic006G069200 Sobic001G284425--Sobic006G069200 Sobic001G284425--Sobic010G076700 Sobic003G223800 Sobic003G223800 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic001G173300 Sobic001G173300 Sobic009G208800--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G208800--Sobic004G257300 Sobic009G220200 Sobic009G220200 Sobic009G208800--Sobic009G220200 Sobic003G296700 Sobic003G296700 Sobic009G208800--Sobic003G296700 Sobic001G516600 Sobic001G516600 Sobic009G208800--Sobic001G516600 Sobic007G057100 Sobic007G057100 Sobic009G208800--Sobic007G057100 Sobic002G294700 Sobic002G294700 Sobic009G208800--Sobic002G294700 Sobic005G231700 Sobic005G231700 Sobic009G208800--Sobic005G231700 Sobic008G177800 Sobic008G177800 Sobic009G208800--Sobic008G177800 Sobic009G258300 Sobic009G258300 Sobic003G293600--Sobic009G258300 Sobic003G293600--Sobic004G278200 Sobic003G293600--Sobic007G166900 Sobic006G267900 Sobic006G267900 Sobic003G293600--Sobic006G267900 Sobic003G293600--Sobic010G006700 Sobic002G427400 Sobic002G427400 Sobic003G293600--Sobic002G427400 Sobic001G125100 Sobic001G125100 Sobic003G293600--Sobic001G125100 Sobic003G373150 Sobic003G373150 Sobic003G293600--Sobic003G373150 Sobic004G321000 Sobic004G321000 Sobic003G293600--Sobic004G321000 Sobic007G166900--Sobic010G006700 Sobic007G166900--Sobic002G427400 Sobic004G331300 Sobic004G331300 Sobic007G166900--Sobic004G331300 Sobic007G166900--Sobic003G373150 Sobic004G310600 Sobic004G310600 Sobic007G166900--Sobic004G310600 Sobic007G166900--Sobic006G267900 Sobic001G159850 Sobic001G159850 Sobic007G166900--Sobic001G159850
Octagon: transcription factors


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