Gene annotation
Transcriptome id Sobic.002G373600.2,Sobic.002G373600.1
Synonym Sb02g039160
Functional annotation von Willebrand factor type A domain containing protein, expressed
UniProt C5XE05 , A0A1W0W7D6
Pfam PF13768
Panther DB PTHR10338 PTHR10338:SF125
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19110 : inter-alpha-trypsin inhibitor heavy chain-related
RAP-DB (Rice) LOC_Os07g42280.1 : von Willebrand factor type A domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048751 , Zm00025a015198
Brachypodium KQK15269 , KQK15268 , KQK15270 , KQK15271 , KQK21327 , KQK21328
Barley HORVU2Hr1G031470.11 , HORVU2Hr1G031470.10 , HORVU2Hr1G031470.12 , HORVU2Hr1G031470.2 , HORVU2Hr1G031470.5 , HORVU2Hr1G031470.4 , HORVU2Hr1G031470.7 , HORVU2Hr1G031470.6 , HORVU2Hr1G031470.1 , HORVU2Hr1G031470.3 , HORVU2Hr1G031470.9 , HORVU2Hr1G031470.8
Wheat TraesCS2A02G170000 , TraesCS2B02G196300 , TraesCS2B02G196300 , TraesCS2D02G177500 , TraesCS2D02G177500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G284400 jmjC domain containing protein, expressed -
2 Sobic.001G284425 - -
3 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
4 Sobic.006G199700 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
5 Sobic.010G252900 methyl-binding domain protein MBD, putative, expressed -
6 Sobic.003G435400 OsDegp14 - Putative Deg protease homologue, expressed -
7 Sobic.010G134700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
8 Sobic.010G220400 -(PubMedID : 23108465)@OsFBX202 - F-box domain containing protein, expressed -
9 Sobic.003G327600 domain of unknown function, DUF250 domain containing protein, expressed -
10 Sobic.003G223800 transmembrane amino acid transporter protein, putative, expressed -
11 Sobic.010G253400 AIG2-like family domain containing protein, expressed -
12 Sobic.010G076700 expressed protein -
13 Sobic.001G286000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.006G069200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
15 Sobic.007G137400 CSLA11 - cellulose synthase-like family A, expressed K13680: beta-mannan synthase
16 Sobic.004G098800 - -
17 Sobic.009G120600 expressed protein -
18 Sobic.010G114800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
19 Sobic.010G075000 DNA ligase, putative, expressed -
20 Sobic.006G128200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Kinase(PubMedID : 30367619)@protein kinase, putative, expressed -


Gene co-expression network
sample Sobic002G373600 Sobic002G373600 Sobic001G284400 Sobic001G284400 Sobic002G373600--Sobic001G284400 Sobic001G284425 Sobic001G284425 Sobic002G373600--Sobic001G284425 Sobic003G385000 Sobic003G385000 Sobic002G373600--Sobic003G385000 Sobic006G199700 Sobic006G199700 Sobic002G373600--Sobic006G199700 Sobic010G252900 Sobic010G252900 Sobic002G373600--Sobic010G252900 Sobic003G435400 Sobic003G435400 Sobic002G373600--Sobic003G435400 Sobic010G134700 Sobic010G134700 Sobic002G373600--Sobic010G134700 Sobic010G220400 Sobic010G220400 Sobic002G373600--Sobic010G220400 Sobic003G327600 Sobic003G327600 Sobic002G373600--Sobic003G327600 Sobic001G284400--Sobic002G373600 Sobic001G284400--Sobic001G284425 Sobic008G129000 Sobic008G129000 Sobic001G284400--Sobic008G129000 Sobic010G076700 Sobic010G076700 Sobic001G284400--Sobic010G076700 Sobic001G284400--Sobic003G385000 Sobic001G284400--Sobic010G252900 Sobic005G044300 Sobic005G044300 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic001G284425--Sobic003G385000 Sobic001G284425--Sobic001G284400 Sobic001G284425--Sobic002G373600 Sobic001G284425--Sobic006G199700 Sobic006G069200 Sobic006G069200 Sobic001G284425--Sobic006G069200 Sobic001G284425--Sobic010G076700 Sobic003G223800 Sobic003G223800 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic003G385000--Sobic010G134700 Sobic004G098800 Sobic004G098800 Sobic003G385000--Sobic004G098800 Sobic003G385000--Sobic001G284425 Sobic008G041450 Sobic008G041450 Sobic003G385000--Sobic008G041450 Sobic003G385000--Sobic002G373600 Sobic003G385000--Sobic001G284400 Sobic007G070500 Sobic007G070500 Sobic003G385000--Sobic007G070500 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic006G199700--Sobic003G435400 Sobic006G199700--Sobic002G373600 Sobic006G199700--Sobic003G385000 Sobic006G199700--Sobic001G284425 Sobic006G199700--Sobic006G069200 Sobic006G199700--Sobic003G223800 Sobic008G010900 Sobic008G010900 Sobic006G199700--Sobic008G010900 Sobic006G199700--Sobic004G098800 Sobic002G019750 Sobic002G019750 Sobic006G199700--Sobic002G019750 Sobic010G252900--Sobic001G284400 Sobic010G252900--Sobic002G373600 Sobic010G252900--Sobic001G284425 Sobic003G144200 Sobic003G144200 Sobic010G252900--Sobic003G144200 Sobic010G252900--Sobic006G199700 Sobic010G252900--Sobic003G435400 Sobic004G040800 Sobic004G040800 Sobic010G252900--Sobic004G040800 Sobic010G075000 Sobic010G075000 Sobic010G252900--Sobic010G075000 Sobic003G424300 Sobic003G424300 Sobic010G252900--Sobic003G424300 Sobic003G435400--Sobic006G199700 Sobic001G414100 Sobic001G414100 Sobic003G435400--Sobic001G414100 Sobic006G096800 Sobic006G096800 Sobic003G435400--Sobic006G096800 Sobic002G290100 Sobic002G290100 Sobic003G435400--Sobic002G290100 Sobic003G435400--Sobic004G098800 Sobic003G435400--Sobic002G373600 Sobic003G392275 Sobic003G392275 Sobic003G435400--Sobic003G392275 Sobic003G435400--Sobic010G134700 Sobic003G435400--Sobic003G223800 Sobic010G134700--Sobic004G098800 Sobic010G134700--Sobic003G385000 Sobic002G368100 Sobic002G368100 Sobic010G134700--Sobic002G368100 Sobic010G006800 Sobic010G006800 Sobic010G134700--Sobic010G006800 Sobic008G141600 Sobic008G141600 Sobic010G134700--Sobic008G141600 Sobic004G074900 Sobic004G074900 Sobic010G134700--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G134700--Sobic003G238250 Sobic010G134700--Sobic003G392275 Sobic010G134700--Sobic004G178700 Sobic009G000700 Sobic009G000700 Sobic010G220400--Sobic009G000700 Sobic001G159850 Sobic001G159850 Sobic010G220400--Sobic001G159850 Sobic004G331900 Sobic004G331900 Sobic003G327600--Sobic004G331900 Sobic003G348200 Sobic003G348200 Sobic003G327600--Sobic003G348200 Sobic004G151200 Sobic004G151200 Sobic003G327600--Sobic004G151200 Sobic003G327600--Sobic003G424300 Sobic010G248000 Sobic010G248000 Sobic003G327600--Sobic010G248000 Sobic003G327600--Sobic002G373600 Sobic004G040700 Sobic004G040700 Sobic003G327600--Sobic004G040700 Sobic002G367800 Sobic002G367800 Sobic003G327600--Sobic002G367800 Sobic001G313301 Sobic001G313301 Sobic003G327600--Sobic001G313301
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.