Gene annotation
| Transcriptome id | Sobic.010G114800.2,Sobic.010G114800.1 |
|---|---|
| Synonym | Sb10g009970, |
| Functional annotation | Up-reguralion under heat (PubMedID : 24916767) Up-reguralion under combine stress of drought and heat (PubMedID : 24916767) cyclin-dependent kinase G-1, putative, expressed |
| UniProt | A0A1W0VSF8 , C5Z8I7 |
| Pfam | PF00069 PF07714 |
| Panther DB | PTHR24056 PTHR24056:SF183 |
| NCBI CDD | KOG0663; Protein kinase PITSLRE and related kinases |
| KEGG Orthology | K08818; cell division cycle 2-like |
| Gene Ontology | GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT1G67580 : Protein kinase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os10g06510.1 : cyclin-dependent kinase G-1, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G367350 | - | - |
| 2 | Sobic.004G310600 | Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed | - |
| 3 | Sobic.009G000700 | Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed | - |
| 4 | Sobic.010G220400 | -(PubMedID : 23108465)@OsFBX202 - F-box domain containing protein, expressed | - |
| 5 | Sobic.003G373150 | - | - |
| 6 | Sobic.006G267900 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed | - |
| 7 | Sobic.003G078501 | - | - |
| 8 | Sobic.010G006700 | auxin-induced protein 5NG4, putative, expressed | - |
| 9 | Sobic.003G233900 | - | - |
| 10 | Sobic.004G155150 | - | - |
| 11 | Sobic.004G331300 | AP2 domain containing protein, expressed | - |
| 12 | Sobic.004G257350 | - | - |
| 13 | Sobic.007G166900 | auxin-induced protein 5NG4, putative, expressed | - |
| 14 | Sobic.001G125100 | pre-mRNA-splicing factor, putative, expressed | K12817: PRPF18, pre-mRNA-splicing factor 18 |
| 15 | Sobic.001G243000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat stress transcription factor, putative, expressed | K09419: heat shock transcription factor, other eukaryote |
| 16 | Sobic.002G189000 | homeobox associated leucine zipper, putative, expressed | K09338: homeobox-leucine zipper protein |
| 17 | Sobic.001G159850 | - | - |
| 18 | Sobic.001G159850 | - | - |
| 19 | Sobic.001G159850 | - | - |
| 20 | Sobic.001G159850 | - | - |
Gene co-expression network
Octagon: transcription factors
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