Gene annotation
Transcriptome id Sobic.010G220400.1
Synonym apo1, Aberrant Panicle Organization 1, UFO, Sb10g026580
Functional annotation - (PubMedID : 23108465)
OsFBX202 - F-box domain containing protein, expressed
UniProt A0A1W0VU93 , I2AW98 , A0A0A0UMU7
Pfam -
Panther DB PTHR32133 PTHR32133:SF125
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30950 : F-box family protein
RAP-DB (Rice) LOC_Os06g45460.1 : OsFBX202 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051745
Brachypodium -
Barley HORVU7Hr1G108970.2 , HORVU7Hr1G108970.3 , HORVU7Hr1G108970.1
Wheat TraesCS7A02G481600 , TraesCS7B02G384000 , TraesCS7D02G468700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
2 Sobic.001G159850 - -
3 Sobic.001G159850 - -
4 Sobic.001G159850 - -
5 Sobic.001G159850 - -
6 Sobic.001G159850 - -
7 Sobic.001G159850 - -
8 Sobic.001G159850 - -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
17 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
18 Sobic.004G331300 AP2 domain containing protein, expressed -
19 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.003G078501 - -


Gene co-expression network
sample Sobic010G220400 Sobic010G220400 Sobic009G000700 Sobic009G000700 Sobic010G220400--Sobic009G000700 Sobic001G159850 Sobic001G159850 Sobic010G220400--Sobic001G159850 Sobic004G310600 Sobic004G310600 Sobic009G000700--Sobic004G310600 Sobic003G078501 Sobic003G078501 Sobic009G000700--Sobic003G078501 Sobic004G155150 Sobic004G155150 Sobic009G000700--Sobic004G155150 Sobic010G006700 Sobic010G006700 Sobic009G000700--Sobic010G006700 Sobic004G331300 Sobic004G331300 Sobic009G000700--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic009G000700--Sobic003G233900 Sobic003G373150 Sobic003G373150 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic001G125100 Sobic001G125100 Sobic009G000700--Sobic001G125100 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


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