Gene annotation
Transcriptome id Sobic.006G267900.1
Synonym Sb06g033010, SbDof21,DNA binding with One Finger
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt R4NHW2 , A0A109NCT0 , C5YAJ6 , A1E9U5
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G66940 : Dof-type zinc finger DNA-binding family protein
RAP-DB (Rice) LOC_Os04g58190.3 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049197 , Zm00025a004485 , Zm00025a009285 , Zm00025a023031 , Zm00025a017356 , Zm00025a007115 , Zm00025a032602 , Zm00025a007401 , Zm00025a047370 , Zm00025a052752 , Zm00025a006464 , Zm00025a039572 , Zm00025a016727 , Zm00025a014147 , Zm00025a021740 , Zm00025a017302 , Zm00025a001854 , Zm00025a000851 , Zm00025a021884 , Zm00025a032473 , Zm00025a057389 , Zm00025a014756 , Zm00025a008288 , Zm00025a004967 , Zm00025a048181 , Zm00025a026723 , Zm00025a043793
Brachypodium KQJ85311 , KQK22335 , KQK14158 , PNT73247 , PNT69224 , KQK00955 , KQK16070 , PNT65625 , PNT65624 , KQJ98766 , PNT69485 , KQJ90639 , KQK03138 , KQK06036 , KQK14319 , KQK23432 , KQK00737 , KQJ84092 , KQK00738
Barley HORVU2Hr1G013060.1 , HORVU2Hr1G119160.6 , HORVU2Hr1G119160.4 , HORVU2Hr1G119160.2 , HORVU2Hr1G119160.3 , HORVU2Hr1G119160.1 , HORVU1Hr1G044560.1 , HORVU4Hr1G074990.3 , HORVU4Hr1G074990.2 , HORVU4Hr1G074990.1 , HORVU1Hr1G074140.1 , HORVU3Hr1G083460.1 , HORVU4Hr1G013890.1 , HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU5Hr1G048700.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU2Hr1G119110.3 , HORVU2Hr1G119110.7 , HORVU2Hr1G119110.6 , HORVU2Hr1G119110.5 , HORVU2Hr1G119110.9 , HORVU2Hr1G119110.8 , HORVU6Hr1G065250.1 , HORVU5Hr1G097620.1 , HORVU7Hr1G043250.2 , HORVU6Hr1G065250.10 , HORVU2Hr1G119110.4
Wheat TraesCS5B02G154100 , TraesCS2A02G402200 , TraesCS4B02G206800 , TraesCS2D02G563000 , TraesCS4A02G097800 , TraesCS5A02G155900 , TraesCS4B02G286400 , TraesCS2A02G591100 , TraesCS2D02G563400 , TraesCS6D02G236700 , TraesCS2D02G563200 , TraesCS6B02G301500 , TraesCS4D02G285100 , TraesCS2B02G592600 , TraesCS4D02G207600 , TraesCS2D02G399500 , TraesCS2B02G592900 , TraesCS2A02G590800 , TraesCS2B02G592800 , TraesCS4A02G017700 , TraesCS6A02G274000 , TraesCS2B02G592700 , TraesCS2A02G591200 , TraesCS5D02G161000 , TraesCS6D02G254200 , TraesCS6B02G270100 , TraesCS2B02G420400 , TraesCS6A02G255500 , TraesCS2A02G590700
Populus PNT43441


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cDNA sequences
Sobic.006G267900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
2 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
3 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
4 Sobic.003G078501 - -
5 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
6 Sobic.004G155150 - -
7 Sobic.003G373150 - -
8 Sobic.003G367350 - -
9 Sobic.004G331300 AP2 domain containing protein, expressed -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.001G159850 - -
20 Sobic.001G159850 - -


Gene co-expression network
sample Sobic006G267900 Sobic006G267900 Sobic009G000700 Sobic009G000700 Sobic006G267900--Sobic009G000700 Sobic010G006700 Sobic010G006700 Sobic006G267900--Sobic010G006700 Sobic004G310600 Sobic004G310600 Sobic006G267900--Sobic004G310600 Sobic003G078501 Sobic003G078501 Sobic006G267900--Sobic003G078501 Sobic001G125100 Sobic001G125100 Sobic006G267900--Sobic001G125100 Sobic004G155150 Sobic004G155150 Sobic006G267900--Sobic004G155150 Sobic003G373150 Sobic003G373150 Sobic006G267900--Sobic003G373150 Sobic003G367350 Sobic003G367350 Sobic006G267900--Sobic003G367350 Sobic004G331300 Sobic004G331300 Sobic006G267900--Sobic004G331300 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic009G000700--Sobic003G233900 Sobic009G000700--Sobic003G373150 Sobic009G000700--Sobic006G267900 Sobic009G000700--Sobic001G125100 Sobic010G006700--Sobic004G331300 Sobic010G006700--Sobic003G078501 Sobic010G006700--Sobic009G000700 Sobic001G159850 Sobic001G159850 Sobic010G006700--Sobic001G159850 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G310600--Sobic004G155150 Sobic004G310600--Sobic004G331300 Sobic004G310600--Sobic003G233900 Sobic004G257350 Sobic004G257350 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900 Sobic003G078501--Sobic004G310600 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic003G078501--Sobic001G125100 Sobic003G078501--Sobic001G159850 Sobic001G125100--Sobic003G078501 Sobic001G125100--Sobic010G006700 Sobic001G125100--Sobic003G373150 Sobic001G125100--Sobic001G159850 Sobic004G155150--Sobic009G000700 Sobic004G155150--Sobic004G310600 Sobic004G155150--Sobic003G078501 Sobic004G155150--Sobic003G233900 Sobic004G155150--Sobic006G267900 Sobic004G155150--Sobic010G006700 Sobic004G155150--Sobic004G257350 Sobic004G155150--Sobic003G373150 Sobic004G155150--Sobic001G125100 Sobic003G373150--Sobic004G310600 Sobic003G373150--Sobic001G125100 Sobic003G373150--Sobic009G000700 Sobic003G373150--Sobic010G006700 Sobic004G283201 Sobic004G283201 Sobic003G373150--Sobic004G283201 Sobic003G373150--Sobic003G078501 Sobic006G055600 Sobic006G055600 Sobic003G373150--Sobic006G055600 Sobic003G373150--Sobic006G267900 Sobic004G278200 Sobic004G278200 Sobic003G373150--Sobic004G278200 Sobic003G367350--Sobic003G078501 Sobic003G367350--Sobic001G159850 Sobic004G331300--Sobic001G159850
Octagon: transcription factors


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