Gene annotation
Transcriptome id Sobic.003G223800.2
Synonym Sb03g028210
Functional annotation transmembrane amino acid transporter protein, putative, expressed
UniProt A0A1W0VYH2
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF229
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41800 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os01g43320.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a028385
Brachypodium KQK04635 , KQK08777 , KQK08776 , KQK08775 , PNT72405
Barley HORVU3Hr1G055450.4 , HORVU3Hr1G055450.5 , HORVU1Hr1G092980.12 , HORVU3Hr1G055450.16 , HORVU3Hr1G055450.17 , HORVU3Hr1G055450.14 , HORVU3Hr1G055450.15 , HORVU3Hr1G055450.12 , HORVU3Hr1G055450.13 , HORVU3Hr1G055450.10 , HORVU3Hr1G055450.11 , HORVU3Hr1G055450.8 , HORVU3Hr1G055450.9 , HORVU3Hr1G055450.6 , HORVU3Hr1G055450.7 , HORVU3Hr1G055450.1 , HORVU3Hr1G055450.2 , HORVU3Hr1G055450.3 , HORVU1Hr1G092980.8 , HORVU1Hr1G092980.5 , HORVU1Hr1G092980.4 , HORVU1Hr1G092980.6
Wheat TraesCS3B02G253600 , TraesCS1D02G434300 , TraesCS1D02G434300 , TraesCS1A02G425400 , TraesCS1B02G459800 , TraesCS3D02G229500 , TraesCS3A02G224100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
2 Sobic.006G199700 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
3 Sobic.004G098800 - -
4 Sobic.010G134700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
5 Sobic.003G435400 OsDegp14 - Putative Deg protease homologue, expressed -
6 Sobic.001G284425 - -
7 Sobic.010G220400 -(PubMedID : 23108465)@OsFBX202 - F-box domain containing protein, expressed -
8 Sobic.008G041450 - -
9 Sobic.002G373600 von Willebrand factor type A domain containing protein, expressed -
10 Sobic.006G069200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
11 Sobic.004G046900 expressed protein -
12 Sobic.006G201900 tRNA-splicing endonuclease positive effector-related, putative, expressed -
13 Sobic.003G141600 - -
14 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
15 Sobic.004G278700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
16 Sobic.001G414100 expressed protein -
17 Sobic.003G392275 - -
18 Sobic.010G114800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
19 Sobic.003G040800 WRKY102, expressed -
20 Sobic.005G060766 - -


Gene co-expression network
sample Sobic003G223800 Sobic003G223800 Sobic003G385000 Sobic003G385000 Sobic003G223800--Sobic003G385000 Sobic006G199700 Sobic006G199700 Sobic003G223800--Sobic006G199700 Sobic004G098800 Sobic004G098800 Sobic003G223800--Sobic004G098800 Sobic010G134700 Sobic010G134700 Sobic003G223800--Sobic010G134700 Sobic003G435400 Sobic003G435400 Sobic003G223800--Sobic003G435400 Sobic001G284425 Sobic001G284425 Sobic003G223800--Sobic001G284425 Sobic010G220400 Sobic010G220400 Sobic003G223800--Sobic010G220400 Sobic008G041450 Sobic008G041450 Sobic003G223800--Sobic008G041450 Sobic002G373600 Sobic002G373600 Sobic003G223800--Sobic002G373600 Sobic003G385000--Sobic010G134700 Sobic003G385000--Sobic004G098800 Sobic003G385000--Sobic001G284425 Sobic003G385000--Sobic008G041450 Sobic003G385000--Sobic002G373600 Sobic001G284400 Sobic001G284400 Sobic003G385000--Sobic001G284400 Sobic007G070500 Sobic007G070500 Sobic003G385000--Sobic007G070500 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic006G199700--Sobic003G435400 Sobic006G199700--Sobic002G373600 Sobic006G199700--Sobic003G385000 Sobic006G199700--Sobic001G284425 Sobic006G069200 Sobic006G069200 Sobic006G199700--Sobic006G069200 Sobic006G199700--Sobic003G223800 Sobic008G010900 Sobic008G010900 Sobic006G199700--Sobic008G010900 Sobic006G199700--Sobic004G098800 Sobic002G019750 Sobic002G019750 Sobic006G199700--Sobic002G019750 Sobic004G098800--Sobic010G134700 Sobic004G098800--Sobic008G041450 Sobic003G392275 Sobic003G392275 Sobic004G098800--Sobic003G392275 Sobic004G098800--Sobic003G385000 Sobic010G006800 Sobic010G006800 Sobic004G098800--Sobic010G006800 Sobic003G141600 Sobic003G141600 Sobic004G098800--Sobic003G141600 Sobic001G490950 Sobic001G490950 Sobic004G098800--Sobic001G490950 Sobic002G102300 Sobic002G102300 Sobic004G098800--Sobic002G102300 Sobic004G032600 Sobic004G032600 Sobic004G098800--Sobic004G032600 Sobic010G134700--Sobic004G098800 Sobic010G134700--Sobic003G385000 Sobic002G368100 Sobic002G368100 Sobic010G134700--Sobic002G368100 Sobic010G134700--Sobic010G006800 Sobic008G141600 Sobic008G141600 Sobic010G134700--Sobic008G141600 Sobic004G074900 Sobic004G074900 Sobic010G134700--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G134700--Sobic003G238250 Sobic010G134700--Sobic003G392275 Sobic010G134700--Sobic004G178700 Sobic003G435400--Sobic006G199700 Sobic001G414100 Sobic001G414100 Sobic003G435400--Sobic001G414100 Sobic006G096800 Sobic006G096800 Sobic003G435400--Sobic006G096800 Sobic002G290100 Sobic002G290100 Sobic003G435400--Sobic002G290100 Sobic003G435400--Sobic004G098800 Sobic003G435400--Sobic002G373600 Sobic003G435400--Sobic003G392275 Sobic003G435400--Sobic010G134700 Sobic003G435400--Sobic003G223800 Sobic001G284425--Sobic003G385000 Sobic001G284425--Sobic001G284400 Sobic001G284425--Sobic002G373600 Sobic001G284425--Sobic006G199700 Sobic001G284425--Sobic006G069200 Sobic010G076700 Sobic010G076700 Sobic001G284425--Sobic010G076700 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic009G000700 Sobic009G000700 Sobic010G220400--Sobic009G000700 Sobic001G159850 Sobic001G159850 Sobic010G220400--Sobic001G159850 Sobic008G041450--Sobic004G098800 Sobic008G041600 Sobic008G041600 Sobic008G041450--Sobic008G041600 Sobic008G041450--Sobic003G141600 Sobic008G041450--Sobic010G134700 Sobic008G041450--Sobic003G392275 Sobic008G041450--Sobic003G385000 Sobic008G041450--Sobic010G006800 Sobic008G041450--Sobic002G102300 Sobic008G041450--Sobic001G414100 Sobic002G373600--Sobic001G284400 Sobic002G373600--Sobic001G284425 Sobic002G373600--Sobic003G385000 Sobic002G373600--Sobic006G199700 Sobic010G252900 Sobic010G252900 Sobic002G373600--Sobic010G252900 Sobic002G373600--Sobic003G435400 Sobic002G373600--Sobic010G134700 Sobic002G373600--Sobic010G220400 Sobic003G327600 Sobic003G327600 Sobic002G373600--Sobic003G327600
Octagon: transcription factors


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