Gene annotation
Transcriptome id Sobic.003G385000.1
Synonym Sb03g042410
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
serine/threonine protein kinase, putative, expressed
UniProt A0A1B6Q7H2
Pfam PF12796 PF07714
Panther DB PTHR23257 PTHR23257:SF378
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G43850 : Integrin-linked protein kinase family
RAP-DB (Rice) LOC_Os01g66860.3 : serine/threonine protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a027576 , Zm00025a026470
Brachypodium KQK10990
Barley HORVU3Hr1G090030.33 , HORVU3Hr1G090030.32 , HORVU3Hr1G090030.31 , HORVU3Hr1G090030.37 , HORVU3Hr1G090030.35 , HORVU3Hr1G090030.30 , HORVU3Hr1G090030.36 , HORVU3Hr1G090030.34 , HORVU3Hr1G090030.39 , HORVU3Hr1G090030.38 , HORVU6Hr1G055820.8 , HORVU6Hr1G055820.5 , HORVU3Hr1G090030.3 , HORVU3Hr1G090030.2 , HORVU3Hr1G090030.5 , HORVU3Hr1G090030.4 , HORVU3Hr1G090030.7 , HORVU3Hr1G090030.9 , HORVU3Hr1G090030.8 , HORVU3Hr1G090030.20 , HORVU3Hr1G090030.21 , HORVU3Hr1G090030.22 , HORVU3Hr1G090030.23 , HORVU3Hr1G090030.26 , HORVU3Hr1G090030.27 , HORVU3Hr1G090030.28 , HORVU3Hr1G090030.29 , HORVU3Hr1G090030.6 , HORVU6Hr1G055820.9 , HORVU6Hr1G055820.4 , HORVU6Hr1G055820.6 , HORVU6Hr1G055820.7 , HORVU6Hr1G055820.2 , HORVU6Hr1G055820.3 , HORVU3Hr1G090030.15 , HORVU3Hr1G090030.14 , HORVU3Hr1G090030.16 , HORVU3Hr1G090030.11 , HORVU3Hr1G090030.10 , HORVU3Hr1G090030.13 , HORVU3Hr1G090030.12 , HORVU3Hr1G090030.19 , HORVU3Hr1G090030.18 , HORVU6Hr1G055820.12 , HORVU6Hr1G055820.10 , HORVU6Hr1G055820.11
Wheat TraesCS3A02G400600 , TraesCS3A02G400600 , TraesCS3D02G395000 , TraesCS3B02G433600 , TraesCS3B02G433600 , TraesCS3D02G395000 , TraesCS6D02G201400 , TraesCS6D02G201400 , TraesCS6A02G218200 , TraesCS6A02G218200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G134700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
2 Sobic.004G098800 - -
3 Sobic.001G284425 - -
4 Sobic.008G041450 - -
5 Sobic.002G373600 von Willebrand factor type A domain containing protein, expressed -
6 Sobic.001G284400 jmjC domain containing protein, expressed -
7 Sobic.007G070500 OsFBL41 - F-box domain and LRR containing protein, expressed -
8 Sobic.003G223800 transmembrane amino acid transporter protein, putative, expressed -
9 Sobic.004G178700 protein transport protein Sec61, putative, expressed K10956: protein transport protein SEC61 subunit alpha
10 Sobic.006G199700 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
11 Sobic.003G392275 - -
12 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
13 Sobic.004G278700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
14 Sobic.008G141600 expressed protein -
15 Sobic.010G253400 AIG2-like family domain containing protein, expressed -
16 Sobic.003G141600 - -
17 Sobic.004G005700 expressed protein -
18 Sobic.001G490950 - -
19 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.001G414100 expressed protein -


Gene co-expression network
sample Sobic003G385000 Sobic003G385000 Sobic010G134700 Sobic010G134700 Sobic003G385000--Sobic010G134700 Sobic004G098800 Sobic004G098800 Sobic003G385000--Sobic004G098800 Sobic001G284425 Sobic001G284425 Sobic003G385000--Sobic001G284425 Sobic008G041450 Sobic008G041450 Sobic003G385000--Sobic008G041450 Sobic002G373600 Sobic002G373600 Sobic003G385000--Sobic002G373600 Sobic001G284400 Sobic001G284400 Sobic003G385000--Sobic001G284400 Sobic007G070500 Sobic007G070500 Sobic003G385000--Sobic007G070500 Sobic003G223800 Sobic003G223800 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic010G134700--Sobic004G098800 Sobic010G134700--Sobic003G385000 Sobic002G368100 Sobic002G368100 Sobic010G134700--Sobic002G368100 Sobic010G006800 Sobic010G006800 Sobic010G134700--Sobic010G006800 Sobic008G141600 Sobic008G141600 Sobic010G134700--Sobic008G141600 Sobic004G074900 Sobic004G074900 Sobic010G134700--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G134700--Sobic003G238250 Sobic003G392275 Sobic003G392275 Sobic010G134700--Sobic003G392275 Sobic010G134700--Sobic004G178700 Sobic004G098800--Sobic010G134700 Sobic004G098800--Sobic008G041450 Sobic004G098800--Sobic003G392275 Sobic004G098800--Sobic003G385000 Sobic004G098800--Sobic010G006800 Sobic003G141600 Sobic003G141600 Sobic004G098800--Sobic003G141600 Sobic001G490950 Sobic001G490950 Sobic004G098800--Sobic001G490950 Sobic002G102300 Sobic002G102300 Sobic004G098800--Sobic002G102300 Sobic004G032600 Sobic004G032600 Sobic004G098800--Sobic004G032600 Sobic001G284425--Sobic003G385000 Sobic001G284425--Sobic001G284400 Sobic001G284425--Sobic002G373600 Sobic006G199700 Sobic006G199700 Sobic001G284425--Sobic006G199700 Sobic006G069200 Sobic006G069200 Sobic001G284425--Sobic006G069200 Sobic010G076700 Sobic010G076700 Sobic001G284425--Sobic010G076700 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic008G041450--Sobic004G098800 Sobic008G041600 Sobic008G041600 Sobic008G041450--Sobic008G041600 Sobic008G041450--Sobic003G141600 Sobic008G041450--Sobic010G134700 Sobic008G041450--Sobic003G392275 Sobic008G041450--Sobic003G385000 Sobic008G041450--Sobic010G006800 Sobic008G041450--Sobic002G102300 Sobic001G414100 Sobic001G414100 Sobic008G041450--Sobic001G414100 Sobic002G373600--Sobic001G284400 Sobic002G373600--Sobic001G284425 Sobic002G373600--Sobic003G385000 Sobic002G373600--Sobic006G199700 Sobic010G252900 Sobic010G252900 Sobic002G373600--Sobic010G252900 Sobic003G435400 Sobic003G435400 Sobic002G373600--Sobic003G435400 Sobic002G373600--Sobic010G134700 Sobic010G220400 Sobic010G220400 Sobic002G373600--Sobic010G220400 Sobic003G327600 Sobic003G327600 Sobic002G373600--Sobic003G327600 Sobic001G284400--Sobic002G373600 Sobic001G284400--Sobic001G284425 Sobic008G129000 Sobic008G129000 Sobic001G284400--Sobic008G129000 Sobic001G284400--Sobic010G076700 Sobic001G284400--Sobic003G385000 Sobic001G284400--Sobic010G252900 Sobic005G044300 Sobic005G044300 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic007G070500--Sobic003G385000 Sobic001G489150 Sobic001G489150 Sobic007G070500--Sobic001G489150 Sobic002G019750 Sobic002G019750 Sobic007G070500--Sobic002G019750 Sobic007G070500--Sobic006G199700 Sobic007G070500--Sobic001G284400 Sobic010G266800 Sobic010G266800 Sobic007G070500--Sobic010G266800 Sobic003G043800 Sobic003G043800 Sobic007G070500--Sobic003G043800 Sobic010G116700 Sobic010G116700 Sobic007G070500--Sobic010G116700 Sobic006G219900 Sobic006G219900 Sobic007G070500--Sobic006G219900 Sobic003G223800--Sobic003G385000 Sobic003G223800--Sobic006G199700 Sobic003G223800--Sobic004G098800 Sobic003G223800--Sobic010G134700 Sobic003G223800--Sobic003G435400 Sobic003G223800--Sobic001G284425 Sobic003G223800--Sobic010G220400 Sobic003G223800--Sobic008G041450 Sobic003G223800--Sobic002G373600 Sobic004G178700--Sobic002G102300 Sobic004G140400 Sobic004G140400 Sobic004G178700--Sobic004G140400 Sobic004G178700--Sobic003G392275 Sobic004G178700--Sobic010G006800 Sobic004G178700--Sobic010G134700 Sobic001G270700 Sobic001G270700 Sobic004G178700--Sobic001G270700 Sobic004G178700--Sobic003G238250 Sobic005G171700 Sobic005G171700 Sobic004G178700--Sobic005G171700 Sobic004G178700--Sobic004G098800
Octagon: transcription factors


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