Gene annotation
Transcriptome id Sobic.006G199700.1
Synonym NHL8
Functional annotation ara54-like RING finger protein, putative, expressed
UniProt A0A1B6PMY2
Pfam PF01485 PF05773
Panther DB PTHR11685 PTHR11685:SF121
NCBI CDD KOG1814; Predicted E3 ubiquitin ligase
KEGG Orthology K11971; RNF14, E3 ubiquitin-protein ligase RNF14
Gene Ontology GO:0005515; protein binding GO:0016567protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G32340 : NDR1/HIN1-like 8
RAP-DB (Rice) LOC_Os04g50760.1 : ara54-like RING finger protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G106360.1 , HORVU2Hr1G106360.2
Wheat TraesCS2A02G445900 , TraesCS2B02G466700 , TraesCS2B02G525000 , TraesCS2B02G466800 , TraesCS2D02G444600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G435400 OsDegp14 - Putative Deg protease homologue, expressed -
2 Sobic.002G373600 von Willebrand factor type A domain containing protein, expressed -
3 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
4 Sobic.001G284425 - -
5 Sobic.006G069200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
6 Sobic.003G223800 transmembrane amino acid transporter protein, putative, expressed -
7 Sobic.008G010900 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
8 Sobic.004G098800 - -
9 Sobic.002G019750 - -
10 Sobic.001G414100 expressed protein -
11 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
12 Sobic.004G278700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
13 Sobic.007G070500 OsFBL41 - F-box domain and LRR containing protein, expressed -
14 Sobic.005G096700 - -
15 Sobic.010G220400 -(PubMedID : 23108465)@OsFBX202 - F-box domain containing protein, expressed -
16 Sobic.003G017200 osFTL1 FT-Like1 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
17 Sobic.005G110487 - -
18 Sobic.010G134700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
19 Sobic.010G252900 methyl-binding domain protein MBD, putative, expressed -
20 Sobic.002G342100 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic006G199700 Sobic006G199700 Sobic003G435400 Sobic003G435400 Sobic006G199700--Sobic003G435400 Sobic002G373600 Sobic002G373600 Sobic006G199700--Sobic002G373600 Sobic003G385000 Sobic003G385000 Sobic006G199700--Sobic003G385000 Sobic001G284425 Sobic001G284425 Sobic006G199700--Sobic001G284425 Sobic006G069200 Sobic006G069200 Sobic006G199700--Sobic006G069200 Sobic003G223800 Sobic003G223800 Sobic006G199700--Sobic003G223800 Sobic008G010900 Sobic008G010900 Sobic006G199700--Sobic008G010900 Sobic004G098800 Sobic004G098800 Sobic006G199700--Sobic004G098800 Sobic002G019750 Sobic002G019750 Sobic006G199700--Sobic002G019750 Sobic003G435400--Sobic006G199700 Sobic001G414100 Sobic001G414100 Sobic003G435400--Sobic001G414100 Sobic006G096800 Sobic006G096800 Sobic003G435400--Sobic006G096800 Sobic002G290100 Sobic002G290100 Sobic003G435400--Sobic002G290100 Sobic003G435400--Sobic004G098800 Sobic003G435400--Sobic002G373600 Sobic003G392275 Sobic003G392275 Sobic003G435400--Sobic003G392275 Sobic010G134700 Sobic010G134700 Sobic003G435400--Sobic010G134700 Sobic003G435400--Sobic003G223800 Sobic001G284400 Sobic001G284400 Sobic002G373600--Sobic001G284400 Sobic002G373600--Sobic001G284425 Sobic002G373600--Sobic003G385000 Sobic002G373600--Sobic006G199700 Sobic010G252900 Sobic010G252900 Sobic002G373600--Sobic010G252900 Sobic002G373600--Sobic003G435400 Sobic002G373600--Sobic010G134700 Sobic010G220400 Sobic010G220400 Sobic002G373600--Sobic010G220400 Sobic003G327600 Sobic003G327600 Sobic002G373600--Sobic003G327600 Sobic003G385000--Sobic010G134700 Sobic003G385000--Sobic004G098800 Sobic003G385000--Sobic001G284425 Sobic008G041450 Sobic008G041450 Sobic003G385000--Sobic008G041450 Sobic003G385000--Sobic002G373600 Sobic003G385000--Sobic001G284400 Sobic007G070500 Sobic007G070500 Sobic003G385000--Sobic007G070500 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic001G284425--Sobic003G385000 Sobic001G284425--Sobic001G284400 Sobic001G284425--Sobic002G373600 Sobic001G284425--Sobic006G199700 Sobic001G284425--Sobic006G069200 Sobic010G076700 Sobic010G076700 Sobic001G284425--Sobic010G076700 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic002G342100 Sobic002G342100 Sobic006G069200--Sobic002G342100 Sobic001G075101 Sobic001G075101 Sobic006G069200--Sobic001G075101 Sobic007G153001 Sobic007G153001 Sobic006G069200--Sobic007G153001 Sobic009G128300 Sobic009G128300 Sobic006G069200--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic006G069200--Sobic002G182800 Sobic010G016500 Sobic010G016500 Sobic006G069200--Sobic010G016500 Sobic003G227600 Sobic003G227600 Sobic006G069200--Sobic003G227600 Sobic003G233900 Sobic003G233900 Sobic006G069200--Sobic003G233900 Sobic009G216900 Sobic009G216900 Sobic006G069200--Sobic009G216900 Sobic003G223800--Sobic003G385000 Sobic003G223800--Sobic006G199700 Sobic003G223800--Sobic004G098800 Sobic003G223800--Sobic010G134700 Sobic003G223800--Sobic003G435400 Sobic003G223800--Sobic001G284425 Sobic003G223800--Sobic010G220400 Sobic003G223800--Sobic008G041450 Sobic003G223800--Sobic002G373600 Sobic006G223800 Sobic006G223800 Sobic008G010900--Sobic006G223800 Sobic006G017600 Sobic006G017600 Sobic008G010900--Sobic006G017600 Sobic001G112000 Sobic001G112000 Sobic008G010900--Sobic001G112000 Sobic008G010900--Sobic006G199700 Sobic004G101500 Sobic004G101500 Sobic008G010900--Sobic004G101500 Sobic008G010900--Sobic002G342100 Sobic003G409800 Sobic003G409800 Sobic008G010900--Sobic003G409800 Sobic005G110421 Sobic005G110421 Sobic008G010900--Sobic005G110421 Sobic010G090700 Sobic010G090700 Sobic008G010900--Sobic010G090700 Sobic004G098800--Sobic010G134700 Sobic004G098800--Sobic008G041450 Sobic004G098800--Sobic003G392275 Sobic004G098800--Sobic003G385000 Sobic010G006800 Sobic010G006800 Sobic004G098800--Sobic010G006800 Sobic003G141600 Sobic003G141600 Sobic004G098800--Sobic003G141600 Sobic001G490950 Sobic001G490950 Sobic004G098800--Sobic001G490950 Sobic002G102300 Sobic002G102300 Sobic004G098800--Sobic002G102300 Sobic004G032600 Sobic004G032600 Sobic004G098800--Sobic004G032600 Sobic002G019500 Sobic002G019500 Sobic002G019750--Sobic002G019500 Sobic002G019750--Sobic007G070500 Sobic001G489150 Sobic001G489150 Sobic002G019750--Sobic001G489150 Sobic002G019750--Sobic006G199700 Sobic002G019750--Sobic006G223800 Sobic008G155600 Sobic008G155600 Sobic002G019750--Sobic008G155600 Sobic005G170700 Sobic005G170700 Sobic002G019750--Sobic005G170700 Sobic002G106000 Sobic002G106000 Sobic002G019750--Sobic002G106000 Sobic005G064700 Sobic005G064700 Sobic002G019750--Sobic005G064700
Octagon: transcription factors


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